RNA–Protein interactions for RNA: ENST00000635450.2

LINC00339-209, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-209ENST00000635450 CMYA5Q8N3K9 4069 aa12.8□□□□□ -0.36
LINC00339-209ENST00000635450 TRBV23-1A0A0A0MS06 115 aa12.8□□□□□ -0.36
LINC00339-209ENST00000635450 PNMA8CA0A1B0GUJ8 204 aa12.8□□□□□ -0.36
LINC00339-209ENST00000635450 F8VVB4 439 aa12.8□□□□□ -0.36
LINC00339-209ENST00000635450 F8VWA3 439 aa12.8□□□□□ -0.36
LINC00339-209ENST00000635450 CLDN34H7C241 214 aa12.8□□□□□ -0.36
LINC00339-209ENST00000635450 CHRM2P08172 466 aa12.8□□□□□ -0.36
LINC00339-209ENST00000635450 BCL3P20749 454 aa12.8□□□□□ -0.36
LINC00339-209ENST00000635450 VHLP40337 213 aa12.8□□□□□ -0.36
LINC00339-209ENST00000635450 DLX1P56177 255 aa12.8□□□□□ -0.36
LINC00339-209ENST00000635450 PPP3R1P63098 170 aa12.8□□□□□ -0.36
LINC00339-209ENST00000635450 BLMHQ13867 455 aa12.8□□□□□ -0.36
LINC00339-209ENST00000635450 KISS1Q15726 138 aa12.8□□□□□ -0.36
LINC00339-209ENST00000635450 SATL1Q86VE3 508 aa12.8□□□□□ -0.36
LINC00339-209ENST00000635450 FAM185AQ8N0U4 392 aa12.8□□□□□ -0.36
LINC00339-209ENST00000635450 FAM58AQ8N1B3 248 aa12.8□□□□□ -0.36
LINC00339-209ENST00000635450 KIR3DL3Q8N743 410 aa12.8□□□□□ -0.36
LINC00339-209ENST00000635450 ASCC1Q8N9N2 400 aaKnown RBP12.8□□□□□ -0.36
LINC00339-209ENST00000635450 ZNF485Q8NCK3 441 aa12.8□□□□□ -0.36
LINC00339-209ENST00000635450 OR5D18Q8NGL1 313 aa12.8□□□□□ -0.36
LINC00339-209ENST00000635450 MND1Q9BWT6 205 aa12.8□□□□□ -0.36
LINC00339-209ENST00000635450 FAM234AQ9H0X4 552 aa12.8□□□□□ -0.36
LINC00339-209ENST00000635450 UNKLQ9H9P5 680 aaKnown RBP12.8□□□□□ -0.36
LINC00339-209ENST00000635450 ELL3Q9HB65 397 aaPredicted RBP12.8□□□□□ -0.36
LINC00339-209ENST00000635450 PCDHGB5Q9Y5G0 923 aa12.8□□□□□ -0.36
LINC00339-209ENST00000635450 CENPVL3A0A0U1RRI6 287 aa12.79□□□□□ -0.36
LINC00339-209ENST00000635450 A0A1W2PPH5 198 aa12.79□□□□□ -0.36
LINC00339-209ENST00000635450 ANGPTL7O43827 346 aa12.79□□□□□ -0.36
LINC00339-209ENST00000635450 TMEM225BP0DP42 221 aa12.79□□□□□ -0.36
LINC00339-209ENST00000635450 PRKACAP17612 351 aa12.79□□□□□ -0.36
LINC00339-209ENST00000635450 CELP19835 753 aa12.79□□□□□ -0.36
LINC00339-209ENST00000635450 MDKP21741 143 aaPredicted RBP12.79□□□□□ -0.36
LINC00339-209ENST00000635450 NPBWR2P48146 333 aa12.79□□□□□ -0.36
LINC00339-209ENST00000635450 COL10A1Q03692 680 aa12.79□□□□□ -0.36
LINC00339-209ENST00000635450 Q499Y3 187 aa12.79□□□□□ -0.36
LINC00339-209ENST00000635450 RNLSQ5VYX0 342 aa12.79□□□□□ -0.36
LINC00339-209ENST00000635450 VMO1Q7Z5L0 202 aa12.79□□□□□ -0.36
LINC00339-209ENST00000635450 PDZD9Q8IXQ8 264 aa12.79□□□□□ -0.36
LINC00339-209ENST00000635450 SAXO1Q8IYX7 474 aa12.79□□□□□ -0.36
LINC00339-209ENST00000635450 TBC1D15Q8TC07 691 aa12.79□□□□□ -0.36
LINC00339-209ENST00000635450 LHX4Q969G2 390 aa12.79□□□□□ -0.36
LINC00339-209ENST00000635450 SLC25A28Q96A46 364 aa12.79□□□□□ -0.36
LINC00339-209ENST00000635450 CNBD2Q96M20 576 aa12.79□□□□□ -0.36
LINC00339-209ENST00000635450 ZNF747Q9BV97 191 aa12.79□□□□□ -0.36
LINC00339-209ENST00000635450 ZMAT3Q9HA38 289 aaKnown RBP12.79□□□□□ -0.36
LINC00339-209ENST00000635450 RHOFQ9HBH0 211 aa12.79□□□□□ -0.36
LINC00339-209ENST00000635450 RBFOX1Q9NWB1 397 aaKnown RBP12.79□□□□□ -0.36
LINC00339-209ENST00000635450 TAS2R4Q9NYW5 299 aa12.79□□□□□ -0.36
LINC00339-209ENST00000635450 RAB26Q9ULW5 256 aa12.79□□□□□ -0.36
LINC00339-209ENST00000635450 DSCAML1Q8TD84 2053 aa12.79□□□□□ -0.36
LINC00339-209ENST00000635450 HAND1O96004 215 aa12.78□□□□□ -0.36
LINC00339-209ENST00000635450 TK1P04183 234 aa12.78□□□□□ -0.36
LINC00339-209ENST00000635450 FOXL1Q12952 345 aa12.78□□□□□ -0.36
LINC00339-209ENST00000635450 SPIN3Q5JUX0 258 aa12.78□□□□□ -0.36
LINC00339-209ENST00000635450 ZSCAN4Q8NAM6 433 aaPredicted RBP12.78□□□□□ -0.36
LINC00339-209ENST00000635450 OR5D13Q8NGL4 314 aa12.78□□□□□ -0.36
LINC00339-209ENST00000635450 OR13C5Q8NGS8 318 aa12.78□□□□□ -0.36
LINC00339-209ENST00000635450 PGLYRP3Q96LB9 341 aa12.78□□□□□ -0.36
LINC00339-209ENST00000635450 CDCA4Q9BXL8 241 aa12.78□□□□□ -0.36
LINC00339-209ENST00000635450 CKLFQ9UBR5 152 aa12.78□□□□□ -0.36
LINC00339-209ENST00000635450 WNK1Q9H4A3 2382 aa12.78□□□□□ -0.36
LINC00339-209ENST00000635450 TRBV5-5A0A0J9YX44 114 aa12.77□□□□□ -0.37
LINC00339-209ENST00000635450 K7N7A8 449 aa12.77□□□□□ -0.37
LINC00339-209ENST00000635450 M0R1W7 72 aa12.77□□□□□ -0.37
LINC00339-209ENST00000635450 RGS10O43665 173 aa12.77□□□□□ -0.37
LINC00339-209ENST00000635450 KDM4BO94953 1096 aa12.77□□□□□ -0.37
LINC00339-209ENST00000635450 ALDOBP05062 364 aa12.77□□□□□ -0.37
LINC00339-209ENST00000635450 CD1AP06126 327 aa12.77□□□□□ -0.37
LINC00339-209ENST00000635450 SNU13P55769 128 aaKnown RBP12.77□□□□□ -0.37
LINC00339-209ENST00000635450 RPL31P62899 125 aaKnown RBP12.77□□□□□ -0.37
LINC00339-209ENST00000635450 SLC35A2P78381 396 aa12.77□□□□□ -0.37
LINC00339-209ENST00000635450 RELBQ01201 579 aa12.77□□□□□ -0.37
LINC00339-209ENST00000635450 BDH1Q02338 343 aa12.77□□□□□ -0.37
LINC00339-209ENST00000635450 SRSF4Q08170 494 aaKnown RBP12.77□□□□□ -0.37
LINC00339-209ENST00000635450 MED22Q15528 200 aa12.77□□□□□ -0.37
LINC00339-209ENST00000635450 ZNF529Q6P280 563 aa12.77□□□□□ -0.37
LINC00339-209ENST00000635450 GDPD3Q7L5L3 318 aa12.77□□□□□ -0.37
LINC00339-209ENST00000635450 OR51A2Q8NGJ7 313 aa12.77□□□□□ -0.37
LINC00339-209ENST00000635450 PPP1R35Q8TAP8 253 aa12.77□□□□□ -0.37
LINC00339-209ENST00000635450 THRSPQ92748 146 aa12.77□□□□□ -0.37
LINC00339-209ENST00000635450 SNX22Q96L94 193 aa12.77□□□□□ -0.37
LINC00339-209ENST00000635450 CHIAQ9BZP6 476 aa12.77□□□□□ -0.37
LINC00339-209ENST00000635450 CCDC90BQ9GZT6 254 aa12.77□□□□□ -0.37
LINC00339-209ENST00000635450 FAM192AQ9GZU8 254 aa12.77□□□□□ -0.37
LINC00339-209ENST00000635450 PRDM13Q9H4Q3 707 aa12.77□□□□□ -0.37
LINC00339-209ENST00000635450 SEBOXQ9HB31 216 aaPredicted RBP12.77□□□□□ -0.37
LINC00339-209ENST00000635450 HMG20AQ9NP66 347 aa12.77□□□□□ -0.37
LINC00339-209ENST00000635450 TMEM138Q9NPI0 162 aa12.77□□□□□ -0.37
LINC00339-209ENST00000635450 BLOC1S6Q9UL45 172 aa12.77□□□□□ -0.37
LINC00339-209ENST00000635450 GSTK1Q9Y2Q3 226 aa12.77□□□□□ -0.37
LINC00339-209ENST00000635450 IGHV1-69DA0A0B4J2H0 117 aa12.76□□□□□ -0.37
LINC00339-209ENST00000635450 IGKV1-12A0A0C4DH73 117 aa12.76□□□□□ -0.37
LINC00339-209ENST00000635450 hCG_1809904A0A1W2PP81 198 aa12.76□□□□□ -0.37
LINC00339-209ENST00000635450 A0A1W2PPE2 198 aa12.76□□□□□ -0.37
LINC00339-209ENST00000635450 A0A1W2PR64 198 aa12.76□□□□□ -0.37
LINC00339-209ENST00000635450 A0A1W2PRV1 198 aa12.76□□□□□ -0.37
LINC00339-209ENST00000635450 FAM181BA6NEQ2 426 aa12.76□□□□□ -0.37
LINC00339-209ENST00000635450 SH2D1BO14796 132 aa12.76□□□□□ -0.37
LINC00339-209ENST00000635450 WIPF1O43516 503 aa12.76□□□□□ -0.37
LINC00339-209ENST00000635450 IGKV1D-12P01611 117 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms