RNA–Protein interactions for RNA: ENST00000624354.3

VCL-207, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 3,307 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-207ENST00000624354 HIST1H2BDP58876 126 aa7.61□□□□□ -1.19
VCL-207ENST00000624354 HIST1H2BCP62807 126 aa7.61□□□□□ -1.19
VCL-207ENST00000624354 CFHR1Q03591 330 aa7.61□□□□□ -1.19
VCL-207ENST00000624354 SPEM2Q0P670 501 aa7.61□□□□□ -1.19
VCL-207ENST00000624354 UBE2V2Q15819 145 aa7.61□□□□□ -1.19
VCL-207ENST00000624354 KCNMB1Q16558 191 aa7.61□□□□□ -1.19
VCL-207ENST00000624354 HIST2H2BEQ16778 126 aa7.61□□□□□ -1.19
VCL-207ENST00000624354 SLC25A53Q5H9E4 307 aa7.61□□□□□ -1.19
VCL-207ENST00000624354 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.61□□□□□ -1.19
VCL-207ENST00000624354 OR5R1Q8NH85 324 aa7.61□□□□□ -1.19
VCL-207ENST00000624354 HIST1H2BHQ93079 126 aa7.61□□□□□ -1.19
VCL-207ENST00000624354 NTNG2Q96CW9 530 aa7.61□□□□□ -1.19
VCL-207ENST00000624354 ZNF501Q96CX3 271 aaPredicted RBP7.61□□□□□ -1.19
VCL-207ENST00000624354 LIN37Q96GY3 246 aaPredicted RBP7.61□□□□□ -1.19
VCL-207ENST00000624354 NOL4LQ96MY1 436 aaPredicted RBP7.61□□□□□ -1.19
VCL-207ENST00000624354 YPEL4Q96NS1 127 aa7.61□□□□□ -1.19
VCL-207ENST00000624354 OXGR1Q96P68 337 aa7.61□□□□□ -1.19
VCL-207ENST00000624354 HIST1H2BNQ99877 126 aa7.61□□□□□ -1.19
VCL-207ENST00000624354 HIST1H2BMQ99879 126 aa7.61□□□□□ -1.19
VCL-207ENST00000624354 SLC35B3Q9H1N7 401 aa7.61□□□□□ -1.19
VCL-207ENST00000624354 METTL7AQ9H8H3 244 aa7.61□□□□□ -1.19
VCL-207ENST00000624354 PLEKHA2Q9HB19 425 aa7.61□□□□□ -1.19
VCL-207ENST00000624354 ZNF160Q9HCG1 818 aa7.61□□□□□ -1.19
VCL-207ENST00000624354 PLEKHJ1Q9NW61 149 aa7.61□□□□□ -1.19
VCL-207ENST00000624354 PLA2G2EQ9NZK7 142 aa7.61□□□□□ -1.19
VCL-207ENST00000624354 SHISA7A6NL88 538 aa7.61□□□□□ -1.19
VCL-207ENST00000624354 A8MWP6 167 aa7.61□□□□□ -1.19
VCL-207ENST00000624354 CA11O75493 328 aa7.61□□□□□ -1.19
VCL-207ENST00000624354 CTSDP07339 412 aaPredicted RBP7.61□□□□□ -1.19
VCL-207ENST00000624354 OR13C7P0DN81 318 aa7.61□□□□□ -1.19
VCL-207ENST00000624354 FCGR2AP12318 317 aa7.61□□□□□ -1.19
VCL-207ENST00000624354 CHATP28329 748 aa7.61□□□□□ -1.19
VCL-207ENST00000624354 THBS4P35443 961 aa7.61□□□□□ -1.19
VCL-207ENST00000624354 GGNBP1Q5YKI7 109 aa7.61□□□□□ -1.19
VCL-207ENST00000624354 ANKRD37Q7Z713 158 aa7.61□□□□□ -1.19
VCL-207ENST00000624354 LYPD6BQ8NI32 183 aa7.61□□□□□ -1.19
VCL-207ENST00000624354 POC1BQ8TC44 478 aa7.61□□□□□ -1.19
VCL-207ENST00000624354 HLA-CQ95604 372 aa7.61□□□□□ -1.19
VCL-207ENST00000624354 SHDQ96IW2 340 aa7.61□□□□□ -1.19
VCL-207ENST00000624354 GUCD1Q96NT3 240 aa7.61□□□□□ -1.19
VCL-207ENST00000624354 TM2D1Q9BX74 207 aa7.61□□□□□ -1.19
VCL-207ENST00000624354 UNKLQ9H9P5 680 aaKnown RBP7.61□□□□□ -1.19
VCL-207ENST00000624354 TUBD1Q9UJT1 453 aa7.61□□□□□ -1.19
VCL-207ENST00000624354 METTL12A8MUP2 240 aa7.6□□□□□ -1.19
VCL-207ENST00000624354 F5H5K5 113 aa7.6□□□□□ -1.19
VCL-207ENST00000624354 FGF7P21781 194 aa7.6□□□□□ -1.19
VCL-207ENST00000624354 IL2RGP31785 369 aa7.6□□□□□ -1.19
VCL-207ENST00000624354 SMAD4Q13485 552 aaKnown RBP7.6□□□□□ -1.19
VCL-207ENST00000624354 OR2T2Q6IF00 324 aa7.6□□□□□ -1.19
VCL-207ENST00000624354 SYT13Q7L8C5 426 aa7.6□□□□□ -1.19
VCL-207ENST00000624354 C6orf201Q7Z4U5 140 aa7.6□□□□□ -1.19
VCL-207ENST00000624354 BEND2Q8NDZ0 799 aa7.6□□□□□ -1.19
VCL-207ENST00000624354 NFAM1Q8NET5 270 aaPredicted RBP7.6□□□□□ -1.19
VCL-207ENST00000624354 OR5L2Q8NGL0 311 aa7.6□□□□□ -1.19
VCL-207ENST00000624354 PP6455Q8WZ26 134 aa7.6□□□□□ -1.19
VCL-207ENST00000624354 MUCL1Q96DR8 90 aa7.6□□□□□ -1.19
VCL-207ENST00000624354 PACRGQ96M98 296 aaPredicted RBP7.6□□□□□ -1.19
VCL-207ENST00000624354 SIRT7Q9NRC8 400 aa7.6□□□□□ -1.19
VCL-207ENST00000624354 PADI1Q9ULC6 663 aa7.6□□□□□ -1.19
VCL-207ENST00000624354 DHRS3O75911 302 aa7.6□□□□□ -1.19
VCL-207ENST00000624354 GABRR1P24046 479 aa7.6□□□□□ -1.19
VCL-207ENST00000624354 SFTPDP35247 375 aa7.6□□□□□ -1.19
VCL-207ENST00000624354 SOHLH1Q5JUK2 328 aa7.6□□□□□ -1.19
VCL-207ENST00000624354 FAM69BQ5VUD6 431 aa7.6□□□□□ -1.19
VCL-207ENST00000624354 SLC16A14Q7RTX9 510 aa7.6□□□□□ -1.19
VCL-207ENST00000624354 M1APQ8TC57 530 aa7.6□□□□□ -1.19
VCL-207ENST00000624354 SLC25A43Q8WUT9 341 aaPredicted RBP7.6□□□□□ -1.19
VCL-207ENST00000624354 MRPL24Q96A35 216 aaKnown RBP7.6□□□□□ -1.19
VCL-207ENST00000624354 PBDC1Q9BVG4 233 aa7.6□□□□□ -1.19
VCL-207ENST00000624354 FBXO7Q9Y3I1 522 aa7.6□□□□□ -1.19
VCL-207ENST00000624354 COL5A1P20908 1838 aaPredicted RBP7.6□□□□□ -1.19
VCL-207ENST00000624354 PCDH15Q96QU1 1955 aa7.6□□□□□ -1.19
VCL-207ENST00000624354 LOC400499M0QZD8 3231 aa7.6□□□□□ -1.19
VCL-207ENST00000624354 IGKV1D-8A0A087WSZ0 117 aa7.6□□□□□ -1.19
VCL-207ENST00000624354 BORCS7-ASMTA0A0B4J1R7 106 aa7.6□□□□□ -1.19
VCL-207ENST00000624354 CRYM-AS1A6NIL9 109 aa7.6□□□□□ -1.19
VCL-207ENST00000624354 DHRS7CA6NNS2 312 aa7.6□□□□□ -1.19
VCL-207ENST00000624354 ZNF724A8MTY0 619 aa7.6□□□□□ -1.19
VCL-207ENST00000624354 ZNF814B7Z6K7 855 aa7.6□□□□□ -1.19
VCL-207ENST00000624354 E5RGE8 158 aa7.6□□□□□ -1.19
VCL-207ENST00000624354 E9PLN8 166 aa7.6□□□□□ -1.19
VCL-207ENST00000624354 RRP8O43159 456 aaKnown RBP7.6□□□□□ -1.19
VCL-207ENST00000624354 FAHP16930 419 aa7.6□□□□□ -1.19
VCL-207ENST00000624354 ZNF25P17030 456 aaPredicted RBP7.6□□□□□ -1.19
VCL-207ENST00000624354 CTSSP25774 331 aa7.6□□□□□ -1.19
VCL-207ENST00000624354 ZNF133P52736 654 aaPredicted RBP7.6□□□□□ -1.19
VCL-207ENST00000624354 KMT5CQ86Y97 462 aa7.6□□□□□ -1.19
VCL-207ENST00000624354 GJC3Q8NFK1 279 aa7.6□□□□□ -1.19
VCL-207ENST00000624354 HAS2Q92819 552 aa7.6□□□□□ -1.19
VCL-207ENST00000624354 LYZL4Q96KX0 146 aa7.6□□□□□ -1.19
VCL-207ENST00000624354 LUZP4Q9P127 313 aa7.6□□□□□ -1.19
VCL-207ENST00000624354 MCTS1Q9ULC4 181 aaKnown RBP7.6□□□□□ -1.19
VCL-207ENST00000624354 NSG2Q9Y328 171 aa7.6□□□□□ -1.19
VCL-207ENST00000624354 MUC6Q6W4X9 2439 aa7.59□□□□□ -1.19
VCL-207ENST00000624354 C5orf63A6NC05 138 aa7.59□□□□□ -1.19
VCL-207ENST00000624354 ZNF727A8MUV8 499 aa7.59□□□□□ -1.19
VCL-207ENST00000624354 EREGO14944 169 aa7.59□□□□□ -1.19
VCL-207ENST00000624354 RAMP1O60894 148 aa7.59□□□□□ -1.19
VCL-207ENST00000624354 SEC11BP0C7V7 166 aa7.59□□□□□ -1.19
VCL-207ENST00000624354 OR5H8P0DN80 308 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms