RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 FAM57BQ71RH2 274 aa13.29□□□□□ -0.28
PMS1-221ENST00000624204 NUP54Q7Z3B4 507 aa13.29□□□□□ -0.28
PMS1-221ENST00000624204 CMTM1Q8IZ96 169 aa13.29□□□□□ -0.28
PMS1-221ENST00000624204 OR2C3Q8N628 320 aa13.29□□□□□ -0.28
PMS1-221ENST00000624204 PLA2G3Q9NZ20 509 aa13.29□□□□□ -0.28
PMS1-221ENST00000624204 IL18BPO95998 194 aa13.29□□□□□ -0.28
PMS1-221ENST00000624204 HSPB1P04792 205 aaKnown RBP13.29□□□□□ -0.28
PMS1-221ENST00000624204 CELA2BP08218 269 aaPredicted RBP13.29□□□□□ -0.28
PMS1-221ENST00000624204 NUBP1P53384 320 aa13.29□□□□□ -0.28
PMS1-221ENST00000624204 LCN15Q6UWW0 184 aa13.29□□□□□ -0.28
PMS1-221ENST00000624204 THNSL2Q86YJ6 484 aa13.29□□□□□ -0.28
PMS1-221ENST00000624204 BEND2Q8NDZ0 799 aa13.29□□□□□ -0.28
PMS1-221ENST00000624204 OR11L1Q8NGX0 322 aa13.29□□□□□ -0.28
PMS1-221ENST00000624204 TMEM37Q8WXS4 190 aa13.29□□□□□ -0.28
PMS1-221ENST00000624204 WWTR1Q9GZV5 400 aa13.29□□□□□ -0.28
PMS1-221ENST00000624204 NAA60Q9H7X0 242 aa13.29□□□□□ -0.28
PMS1-221ENST00000624204 DKKL1Q9UK85 242 aa13.29□□□□□ -0.28
PMS1-221ENST00000624204 F5H5K5 113 aa13.28□□□□□ -0.28
PMS1-221ENST00000624204 IFI6P09912 130 aa13.28□□□□□ -0.28
PMS1-221ENST00000624204 OR4A8P0C604 315 aa13.28□□□□□ -0.28
PMS1-221ENST00000624204 PAX1P15863 534 aa13.28□□□□□ -0.28
PMS1-221ENST00000624204 CD33P20138 364 aa13.28□□□□□ -0.28
PMS1-221ENST00000624204 COL10A1Q03692 680 aa13.28□□□□□ -0.28
PMS1-221ENST00000624204 IL13RA2Q14627 380 aa13.28□□□□□ -0.28
PMS1-221ENST00000624204 SPIN3Q5JUX0 258 aa13.28□□□□□ -0.28
PMS1-221ENST00000624204 OR5C1Q8NGR4 320 aa13.28□□□□□ -0.28
PMS1-221ENST00000624204 OR1P1Q8NH06 330 aa13.28□□□□□ -0.28
PMS1-221ENST00000624204 ZNF581Q9P0T4 197 aa13.28□□□□□ -0.28
PMS1-221ENST00000624204 M0R143 59 aa13.28□□□□□ -0.28
PMS1-221ENST00000624204 ZNHIT1O43257 154 aa13.28□□□□□ -0.28
PMS1-221ENST00000624204 AKT2P31751 481 aa13.28□□□□□ -0.28
PMS1-221ENST00000624204 IDH3GP51553 393 aaPredicted RBP13.28□□□□□ -0.28
PMS1-221ENST00000624204 ZNF121P58317 390 aaPredicted RBP13.28□□□□□ -0.28
PMS1-221ENST00000624204 PMS2P11Q13670 270 aa13.28□□□□□ -0.28
PMS1-221ENST00000624204 FAM189A2Q15884 450 aa13.28□□□□□ -0.28
PMS1-221ENST00000624204 LGI3Q8N145 548 aa13.28□□□□□ -0.28
PMS1-221ENST00000624204 FBXL14Q8N1E6 418 aa13.28□□□□□ -0.28
PMS1-221ENST00000624204 OR8B12Q8NGG6 310 aa13.28□□□□□ -0.28
PMS1-221ENST00000624204 LIME1Q9H400 295 aa13.28□□□□□ -0.28
PMS1-221ENST00000624204 ZNF319Q9P2F9 582 aa13.28□□□□□ -0.28
PMS1-221ENST00000624204 GOLT1BQ9Y3E0 138 aa13.28□□□□□ -0.28
PMS1-221ENST00000624204 SSSCA1O60232 199 aa13.27□□□□□ -0.28
PMS1-221ENST00000624204 SCGB1D1O95968 90 aa13.27□□□□□ -0.28
PMS1-221ENST00000624204 TMEM187Q14656 261 aa13.27□□□□□ -0.28
PMS1-221ENST00000624204 PPA1Q15181 289 aa13.27□□□□□ -0.28
PMS1-221ENST00000624204 KISS1Q15726 138 aa13.27□□□□□ -0.28
PMS1-221ENST00000624204 MPV17LQ2QL34 196 aa13.27□□□□□ -0.28
PMS1-221ENST00000624204 ZNF705AQ6ZN79 300 aaPredicted RBP13.27□□□□□ -0.28
PMS1-221ENST00000624204 OR10S1Q8NGN2 331 aa13.27□□□□□ -0.28
PMS1-221ENST00000624204 BOD1Q96IK1 185 aa13.27□□□□□ -0.28
PMS1-221ENST00000624204 HIST1H2AAQ96QV6 131 aa13.27□□□□□ -0.28
PMS1-221ENST00000624204 LAMP3Q9UQV4 416 aa13.27□□□□□ -0.28
PMS1-221ENST00000624204 PRRC2CQ9Y520 2896 aaKnown RBP13.27□□□□□ -0.28
PMS1-221ENST00000624204 FRYLO94915 3013 aa13.27□□□□□ -0.28
PMS1-221ENST00000624204 BMP5P22003 454 aa13.27□□□□□ -0.28
PMS1-221ENST00000624204 CSNK1A1P48729 337 aa13.27□□□□□ -0.28
PMS1-221ENST00000624204 PAX5Q02548 391 aa13.27□□□□□ -0.28
PMS1-221ENST00000624204 ZNF66Q6ZN08 573 aa13.27□□□□□ -0.28
PMS1-221ENST00000624204 MYPOPQ86VE0 399 aaPredicted RBP13.27□□□□□ -0.28
PMS1-221ENST00000624204 GPR137CQ8N3F9 429 aa13.27□□□□□ -0.28
PMS1-221ENST00000624204 ZNF283Q8N7M2 679 aa13.27□□□□□ -0.28
PMS1-221ENST00000624204 OR10A7Q8NGE5 316 aa13.27□□□□□ -0.28
PMS1-221ENST00000624204 OR2AJ1Q8NGZ0 328 aa13.27□□□□□ -0.28
PMS1-221ENST00000624204 CHD3Q12873 2000 aaKnown RBP13.27□□□□□ -0.29
PMS1-221ENST00000624204 MARCH11A6NNE9 402 aa13.27□□□□□ -0.29
PMS1-221ENST00000624204 B4DGG1 531 aa13.27□□□□□ -0.29
PMS1-221ENST00000624204 ADH1BP00325 375 aa13.27□□□□□ -0.29
PMS1-221ENST00000624204 EPHA1P21709 976 aa13.27□□□□□ -0.29
PMS1-221ENST00000624204 CEACAM6P40199 344 aa13.27□□□□□ -0.29
PMS1-221ENST00000624204 ERVS71-1P61550 626 aa13.27□□□□□ -0.29
PMS1-221ENST00000624204 P2RY6Q15077 328 aa13.27□□□□□ -0.29
PMS1-221ENST00000624204 HLA-DQA1Q5Y7H0 255 aa13.27□□□□□ -0.29
PMS1-221ENST00000624204 TMEM171Q8WVE6 324 aa13.27□□□□□ -0.29
PMS1-221ENST00000624204 TSLPQ969D9 159 aa13.27□□□□□ -0.29
PMS1-221ENST00000624204 IGSF23A1L1A6 192 aa13.26□□□□□ -0.29
PMS1-221ENST00000624204 POLR2HP52434 150 aaKnown RBP13.26□□□□□ -0.29
PMS1-221ENST00000624204 BIDP55957 195 aa13.26□□□□□ -0.29
PMS1-221ENST00000624204 VAMP2P63027 116 aa13.26□□□□□ -0.29
PMS1-221ENST00000624204 MRPS34P82930 218 aaKnown RBP13.26□□□□□ -0.29
PMS1-221ENST00000624204 ZNF506Q5JVG8 444 aa13.26□□□□□ -0.29
PMS1-221ENST00000624204 FAM185AQ8N0U4 392 aa13.26□□□□□ -0.29
PMS1-221ENST00000624204 CLDND2Q8NHS1 167 aa13.26□□□□□ -0.29
PMS1-221ENST00000624204 AURKAIP1Q9NWT8 199 aaPredicted RBP13.26□□□□□ -0.29
PMS1-221ENST00000624204 CLDN16Q9Y5I7 305 aa13.26□□□□□ -0.29
PMS1-221ENST00000624204 IGKV1-9A0A0C4DH69 117 aa13.26□□□□□ -0.29
PMS1-221ENST00000624204 SERPINE3A8MV23 424 aa13.26□□□□□ -0.29
PMS1-221ENST00000624204 CD55P08174 381 aa13.26□□□□□ -0.29
PMS1-221ENST00000624204 FCGR2AP12318 317 aa13.26□□□□□ -0.29
PMS1-221ENST00000624204 TLE3Q04726 772 aa13.26□□□□□ -0.29
PMS1-221ENST00000624204 CDCA3Q99618 268 aaPredicted RBP13.26□□□□□ -0.29
PMS1-221ENST00000624204 ACTR3CQ9C0K3 210 aaPredicted RBP13.26□□□□□ -0.29
PMS1-221ENST00000624204 ANXA10Q9UJ72 324 aa13.26□□□□□ -0.29
PMS1-221ENST00000624204 NPSP0C0P6 89 aa13.26□□□□□ -0.29
PMS1-221ENST00000624204 NCR3LG1Q68D85 454 aa13.26□□□□□ -0.29
PMS1-221ENST00000624204 LIAT1Q6ZQX7 453 aa13.26□□□□□ -0.29
PMS1-221ENST00000624204 MRPL43Q8N983 215 aaKnown RBP13.26□□□□□ -0.29
PMS1-221ENST00000624204 SLC38A9Q8NBW4 561 aa13.26□□□□□ -0.29
PMS1-221ENST00000624204 ASB10Q8WXI3 467 aa13.26□□□□□ -0.29
PMS1-221ENST00000624204 FAAP24Q9BTP7 215 aa13.26□□□□□ -0.29
PMS1-221ENST00000624204 SLC2A9Q9NRM0 540 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms