RNA–Protein interactions for RNA: ENST00000621562.1

U1.39-201, humanhuman

BASIC

Gene U1, Length 146 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.39-201ENST00000621562 GNRHR2Q96P88 292 aa2.79□□□□□ -1.96
U1.39-201ENST00000621562 ALKBH3Q96Q83 286 aaPredicted RBP2.79□□□□□ -1.96
U1.39-201ENST00000621562 HS3ST6Q96QI5 342 aa2.79□□□□□ -1.96
U1.39-201ENST00000621562 TSNAXQ99598 290 aaKnown RBP2.79□□□□□ -1.96
U1.39-201ENST00000621562 PRRX2Q99811 253 aa2.79□□□□□ -1.96
U1.39-201ENST00000621562 USB1Q9BQ65 265 aaKnown RBP2.79□□□□□ -1.96
U1.39-201ENST00000621562 AIFM2Q9BRQ8 373 aa2.79□□□□□ -1.96
U1.39-201ENST00000621562 GINS3Q9BRX5 216 aa2.79□□□□□ -1.96
U1.39-201ENST00000621562 ZNF2Q9BSG1 426 aaPredicted RBP2.79□□□□□ -1.96
U1.39-201ENST00000621562 RSRP1Q9BUV0 290 aa2.79□□□□□ -1.96
U1.39-201ENST00000621562 ST6GALNAC5Q9BVH7 336 aa2.79□□□□□ -1.96
U1.39-201ENST00000621562 C1QTNF5Q9BXJ0 243 aa2.79□□□□□ -1.96
U1.39-201ENST00000621562 SPRY4Q9C004 299 aa2.79□□□□□ -1.96
U1.39-201ENST00000621562 SLC7A5P2Q9GIP4 190 aa2.79□□□□□ -1.96
U1.39-201ENST00000621562 EGLN1Q9GZT9 426 aa2.79□□□□□ -1.96
U1.39-201ENST00000621562 TMEM231Q9H6L2 316 aa2.79□□□□□ -1.96
U1.39-201ENST00000621562 ESRP2Q9H6T0 727 aaKnown RBP2.79□□□□□ -1.96
U1.39-201ENST00000621562 GPR35Q9HC97 309 aa2.79□□□□□ -1.96
U1.39-201ENST00000621562 PARP11Q9NR21 331 aa2.79□□□□□ -1.96
U1.39-201ENST00000621562 RYDENQ9NUL5 291 aaKnown RBP2.79□□□□□ -1.96
U1.39-201ENST00000621562 ZNF701Q9NV72 531 aaPredicted RBP2.79□□□□□ -1.96
U1.39-201ENST00000621562 UQCC1Q9NVA1 299 aa2.79□□□□□ -1.96
U1.39-201ENST00000621562 C1orf123Q9NWV4 160 aa2.79□□□□□ -1.96
U1.39-201ENST00000621562 SLC39A1Q9NY26 324 aa2.79□□□□□ -1.96
U1.39-201ENST00000621562 ZNF629Q9UEG4 869 aaPredicted RBP2.79□□□□□ -1.96
U1.39-201ENST00000621562 ANXA10Q9UJ72 324 aa2.79□□□□□ -1.96
U1.39-201ENST00000621562 DKKL1Q9UK85 242 aa2.79□□□□□ -1.96
U1.39-201ENST00000621562 PADI1Q9ULC6 663 aa2.79□□□□□ -1.96
U1.39-201ENST00000621562 C14orf166Q9Y224 244 aaKnown RBP2.79□□□□□ -1.96
U1.39-201ENST00000621562 PRELID1Q9Y255 219 aa2.79□□□□□ -1.96
U1.39-201ENST00000621562 RCL1Q9Y2P8 373 aaKnown RBP2.79□□□□□ -1.96
U1.39-201ENST00000621562 STARD10Q9Y365 291 aa2.79□□□□□ -1.96
U1.39-201ENST00000621562 MRPS18CQ9Y3D5 142 aaKnown RBP2.79□□□□□ -1.96
U1.39-201ENST00000621562 POMT1Q9Y6A1 747 aa2.79□□□□□ -1.96
U1.39-201ENST00000621562 BOD1L1Q8NFC6 3051 aa2.78□□□□□ -1.96
U1.39-201ENST00000621562 MGAQ8IWI9 3026 aa2.78□□□□□ -1.96
U1.39-201ENST00000621562 MUC6Q6W4X9 2439 aa2.78□□□□□ -1.96
U1.39-201ENST00000621562 TPRP12270 2363 aaKnown RBP2.78□□□□□ -1.96
U1.39-201ENST00000621562 TRBV6-6A0A0A6YYG2 114 aa2.78□□□□□ -1.96
U1.39-201ENST00000621562 NSG1A0A0A6YYJ2 146 aa2.78□□□□□ -1.96
U1.39-201ENST00000621562 IGKV1D-13A0A0B4J2D9 117 aa2.78□□□□□ -1.96
U1.39-201ENST00000621562 IGKV1-6A0A0C4DH72 117 aa2.78□□□□□ -1.96
U1.39-201ENST00000621562 ZNF816-ZNF321PA0A0X1KG74 233 aa2.78□□□□□ -1.96
U1.39-201ENST00000621562 A0A1B0GW64 132 aa2.78□□□□□ -1.96
U1.39-201ENST00000621562 PQLC2LA1A4F0 135 aa2.78□□□□□ -1.96
U1.39-201ENST00000621562 MEX3AA1L020 520 aaKnown RBP2.78□□□□□ -1.96
U1.39-201ENST00000621562 IGSF23A1L1A6 192 aa2.78□□□□□ -1.96
U1.39-201ENST00000621562 FAM221AA4D161 298 aa2.78□□□□□ -1.96
U1.39-201ENST00000621562 CLEC18AA5D8T8 446 aa2.78□□□□□ -1.96
U1.39-201ENST00000621562 FAM90A10PA6NDY2 464 aa2.78□□□□□ -1.96
U1.39-201ENST00000621562 FAM90A18PA6NE21 464 aa2.78□□□□□ -1.96
U1.39-201ENST00000621562 FAM90A16PA6NEW6 464 aa2.78□□□□□ -1.96
U1.39-201ENST00000621562 FAM90A20PA6NIJ5 464 aa2.78□□□□□ -1.96
U1.39-201ENST00000621562 FAM90A8PA6NJQ4 464 aa2.78□□□□□ -1.96
U1.39-201ENST00000621562 FAM90A7PA6NKC0 464 aa2.78□□□□□ -1.96
U1.39-201ENST00000621562 COLCA2A8K830 154 aa2.78□□□□□ -1.96
U1.39-201ENST00000621562 ZNF705EA8MWA4 302 aaPredicted RBP2.78□□□□□ -1.96
U1.39-201ENST00000621562 FAM90A22PA8MWA6 464 aa2.78□□□□□ -1.96
U1.39-201ENST00000621562 FAM90A12PA8MX19 464 aa2.78□□□□□ -1.96
U1.39-201ENST00000621562 FAM90A5PA8MXJ8 464 aa2.78□□□□□ -1.96
U1.39-201ENST00000621562 FAM90A23PA8MXZ1 464 aa2.78□□□□□ -1.96
U1.39-201ENST00000621562 C9J4A7 227 aa2.78□□□□□ -1.96
U1.39-201ENST00000621562 RPL36A-HNRNPH2H7BZ11 118 aa2.78□□□□□ -1.96
U1.39-201ENST00000621562 TAAR5O14804 337 aa2.78□□□□□ -1.96
U1.39-201ENST00000621562 XRCC2O43543 280 aa2.78□□□□□ -1.96
U1.39-201ENST00000621562 MTRF1O75570 445 aaKnown RBP2.78□□□□□ -1.96
U1.39-201ENST00000621562 MED6O75586 246 aa2.78□□□□□ -1.96
U1.39-201ENST00000621562 CBR3O75828 277 aa2.78□□□□□ -1.96
U1.39-201ENST00000621562 FARS2O95363 451 aaKnown RBP2.78□□□□□ -1.96
U1.39-201ENST00000621562 CST4P01036 141 aa2.78□□□□□ -1.96
U1.39-201ENST00000621562 IGHEP01854 428 aa2.78□□□□□ -1.96
U1.39-201ENST00000621562 WNT2P09544 360 aa2.78□□□□□ -1.96
U1.39-201ENST00000621562 OR5AC1P0C628 307 aa2.78□□□□□ -1.96
U1.39-201ENST00000621562 SFTA3P0C7M3 94 aa2.78□□□□□ -1.96
U1.39-201ENST00000621562 FAM90A15PP0C7V4 464 aa2.78□□□□□ -1.96
U1.39-201ENST00000621562 FAM90A13PP0C7W8 464 aa2.78□□□□□ -1.96
U1.39-201ENST00000621562 FAM90A14PP0C7W9 464 aa2.78□□□□□ -1.96
U1.39-201ENST00000621562 FAM90A24PP0C7X0 464 aa2.78□□□□□ -1.96
U1.39-201ENST00000621562 DANCRP0C864 163 aa2.78□□□□□ -1.96
U1.39-201ENST00000621562 PATE4P0C8F1 98 aa2.78□□□□□ -1.96
U1.39-201ENST00000621562 PET100P0DJ07 73 aa2.78□□□□□ -1.96
U1.39-201ENST00000621562 ZNF728P0DKX0 622 aa2.78□□□□□ -1.96
U1.39-201ENST00000621562 OR5H8P0DN80 308 aa2.78□□□□□ -1.96
U1.39-201ENST00000621562 IGKV1-13P0DP09 117 aa2.78□□□□□ -1.96
U1.39-201ENST00000621562 SPP1P10451 314 aa2.78□□□□□ -1.96
U1.39-201ENST00000621562 FOLR2P14207 255 aa2.78□□□□□ -1.96
U1.39-201ENST00000621562 NME2P22392 152 aa2.78□□□□□ -1.96
U1.39-201ENST00000621562 AADACP22760 399 aa2.78□□□□□ -1.96
U1.39-201ENST00000621562 FCGR2CP31995 323 aa2.78□□□□□ -1.96
U1.39-201ENST00000621562 OPRM1P35372 400 aa2.78□□□□□ -1.96
U1.39-201ENST00000621562 RBMXP38159 391 aaKnown RBP2.78□□□□□ -1.96
U1.39-201ENST00000621562 HTR5AP47898 357 aa2.78□□□□□ -1.96
U1.39-201ENST00000621562 RGS19P49795 217 aa2.78□□□□□ -1.96
U1.39-201ENST00000621562 RBP2P50120 134 aa2.78□□□□□ -1.96
U1.39-201ENST00000621562 LHX2P50458 406 aa2.78□□□□□ -1.96
U1.39-201ENST00000621562 RRADP55042 308 aa2.78□□□□□ -1.96
U1.39-201ENST00000621562 FOXG1P55316 489 aaPredicted RBP2.78□□□□□ -1.96
U1.39-201ENST00000621562 MTCP1P56278 107 aa2.78□□□□□ -1.96
U1.39-201ENST00000621562 CLDN18P56856 261 aa2.78□□□□□ -1.96
U1.39-201ENST00000621562 PIGPP57054 158 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms