RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 NKX3-1Q99801 234 aaPredicted RBP13.48□□□□□ -0.25
CD40-207ENST00000620709 ABCG5Q9H222 651 aa13.48□□□□□ -0.25
CD40-207ENST00000620709 PATZ1Q9HBE1 687 aaKnown RBP13.48□□□□□ -0.25
CD40-207ENST00000620709 RHBDL2Q9NX52 303 aa13.48□□□□□ -0.25
CD40-207ENST00000620709 RABL2AQ9UBK7 228 aaPredicted RBP13.48□□□□□ -0.25
CD40-207ENST00000620709 RABL2BQ9UNT1 228 aa13.48□□□□□ -0.25
CD40-207ENST00000620709 GMDSO60547 372 aa13.47□□□□□ -0.25
CD40-207ENST00000620709 CYB5R3P00387 301 aaPredicted RBP13.47□□□□□ -0.25
CD40-207ENST00000620709 MDH2P40926 338 aaKnown RBP13.47□□□□□ -0.25
CD40-207ENST00000620709 SRP9P49458 86 aaKnown RBP13.47□□□□□ -0.25
CD40-207ENST00000620709 C2orf76Q3KRA6 126 aa13.47□□□□□ -0.25
CD40-207ENST00000620709 TMEM155Q4W5P6 130 aa13.47□□□□□ -0.25
CD40-207ENST00000620709 ESCO2Q56NI9 601 aa13.47□□□□□ -0.25
CD40-207ENST00000620709 PYDC2Q56P42 97 aa13.47□□□□□ -0.25
CD40-207ENST00000620709 AWAT2Q6E213 333 aa13.47□□□□□ -0.25
CD40-207ENST00000620709 CMTM4Q8IZR5 234 aa13.47□□□□□ -0.25
CD40-207ENST00000620709 C3orf56Q8N813 242 aa13.47□□□□□ -0.25
CD40-207ENST00000620709 OR8G5Q8NG78 346 aa13.47□□□□□ -0.25
CD40-207ENST00000620709 OR4D6Q8NGJ1 314 aa13.47□□□□□ -0.25
CD40-207ENST00000620709 OR13G1Q8NGZ3 307 aa13.47□□□□□ -0.25
CD40-207ENST00000620709 NPRL2Q8WTW4 380 aa13.47□□□□□ -0.25
CD40-207ENST00000620709 SPACA5Q96QH8 159 aa13.47□□□□□ -0.25
CD40-207ENST00000620709 GPER1Q99527 375 aa13.47□□□□□ -0.25
CD40-207ENST00000620709 SDHCQ99643 169 aaPredicted RBP13.47□□□□□ -0.25
CD40-207ENST00000620709 GCM1Q9NP62 436 aa13.47□□□□□ -0.25
CD40-207ENST00000620709 PPIAL4AQ9Y536 164 aa13.47□□□□□ -0.25
CD40-207ENST00000620709 TMEM272A0A1B0GTI8 110 aa13.46□□□□□ -0.25
CD40-207ENST00000620709 F5H5P2 479 aa13.46□□□□□ -0.25
CD40-207ENST00000620709 TRAPPC2LH3BP13 241 aa13.46□□□□□ -0.25
CD40-207ENST00000620709 TMEM178BH3BS89 294 aa13.46□□□□□ -0.25
CD40-207ENST00000620709 BPNT1O95861 308 aa13.46□□□□□ -0.25
CD40-207ENST00000620709 PITPNBP48739 271 aa13.46□□□□□ -0.25
CD40-207ENST00000620709 MADCAM1Q13477 382 aa13.46□□□□□ -0.25
CD40-207ENST00000620709 KISS1Q15726 138 aa13.46□□□□□ -0.25
CD40-207ENST00000620709 PYHIN1Q6K0P9 492 aa13.46□□□□□ -0.25
CD40-207ENST00000620709 FBXW12Q6X9E4 464 aa13.46□□□□□ -0.25
CD40-207ENST00000620709 RBMS3Q6XE24 437 aaKnown RBP13.46□□□□□ -0.25
CD40-207ENST00000620709 KRT74Q7RTS7 529 aa13.46□□□□□ -0.25
CD40-207ENST00000620709 MOGAT3Q86VF5 341 aa13.46□□□□□ -0.25
CD40-207ENST00000620709 FAM216AQ8WUB2 273 aa13.46□□□□□ -0.25
CD40-207ENST00000620709 PIGCQ92535 297 aa13.46□□□□□ -0.25
CD40-207ENST00000620709 S100A16Q96FQ6 103 aaKnown RBP13.46□□□□□ -0.25
CD40-207ENST00000620709 MEGF10Q96KG7 1140 aa13.46□□□□□ -0.25
CD40-207ENST00000620709 PPP1R3EQ9H7J1 279 aa13.46□□□□□ -0.25
CD40-207ENST00000620709 ABCB10Q9NRK6 738 aa13.46□□□□□ -0.25
CD40-207ENST00000620709 TMEM100Q9NV29 134 aa13.46□□□□□ -0.25
CD40-207ENST00000620709 SLC7A11Q9UPY5 501 aa13.46□□□□□ -0.25
CD40-207ENST00000620709 AUP1Q9Y679 476 aa13.46□□□□□ -0.25
CD40-207ENST00000620709 CD300LBA8K4G0 201 aa13.45□□□□□ -0.26
CD40-207ENST00000620709 CST4P01036 141 aa13.45□□□□□ -0.26
CD40-207ENST00000620709 RPS2P15880 293 aaKnown RBP13.45□□□□□ -0.26
CD40-207ENST00000620709 ZNF154Q13106 437 aa13.45□□□□□ -0.26
CD40-207ENST00000620709 PLCXD3Q63HM9 321 aa13.45□□□□□ -0.26
CD40-207ENST00000620709 LHFPL2Q6ZUX7 228 aa13.45□□□□□ -0.26
CD40-207ENST00000620709 ANGPTL5Q86XS5 388 aa13.45□□□□□ -0.26
CD40-207ENST00000620709 MUC20Q8N307 709 aaPredicted RBP13.45□□□□□ -0.26
CD40-207ENST00000620709 DEFB108BQ8NET1 73 aa13.45□□□□□ -0.26
CD40-207ENST00000620709 PTX4Q96A99 478 aa13.45□□□□□ -0.26
CD40-207ENST00000620709 BORCS8Q96FH0 119 aa13.45□□□□□ -0.26
CD40-207ENST00000620709 PAPOLGQ9BWT3 736 aaKnown RBP13.45□□□□□ -0.26
CD40-207ENST00000620709 MRPS28Q9Y2Q9 187 aaKnown RBP13.45□□□□□ -0.26
CD40-207ENST00000620709 LRRC30A6NM36 301 aa13.44□□□□□ -0.26
CD40-207ENST00000620709 CEACAM18A8MTB9 384 aa13.44□□□□□ -0.26
CD40-207ENST00000620709 LDLRAD4O15165 306 aa13.44□□□□□ -0.26
CD40-207ENST00000620709 UBBP0CG47 229 aa13.44□□□□□ -0.26
CD40-207ENST00000620709 SELEP16581 610 aa13.44□□□□□ -0.26
CD40-207ENST00000620709 RAB6AP20340 208 aa13.44□□□□□ -0.26
CD40-207ENST00000620709 OR3A4PP47883 348 aa13.44□□□□□ -0.26
CD40-207ENST00000620709 PITPNAQ00169 270 aa13.44□□□□□ -0.26
CD40-207ENST00000620709 IFITM3Q01628 133 aa13.44□□□□□ -0.26
CD40-207ENST00000620709 MOB3CQ70IA8 216 aa13.44□□□□□ -0.26
CD40-207ENST00000620709 SNX29P2Q8IUI4 249 aa13.44□□□□□ -0.26
CD40-207ENST00000620709 OR8H2Q8N162 312 aa13.44□□□□□ -0.26
CD40-207ENST00000620709 SIGLECL1Q8N7X8 197 aa13.44□□□□□ -0.26
CD40-207ENST00000620709 DUX5Q96PT3 197 aa13.44□□□□□ -0.26
CD40-207ENST00000620709 KCNK15Q9H427 330 aa13.44□□□□□ -0.26
CD40-207ENST00000620709 ESM1Q9NQ30 184 aa13.44□□□□□ -0.26
CD40-207ENST00000620709 GHRLQ9UBU3 117 aa13.44□□□□□ -0.26
CD40-207ENST00000620709 IGHV3OR16-10A0A075B7F0 116 aa13.44□□□□□ -0.26
CD40-207ENST00000620709 ANKRD30BLA7E2S9 258 aa13.44□□□□□ -0.26
CD40-207ENST00000620709 ZNF850A8MQ14 1090 aa13.44□□□□□ -0.26
CD40-207ENST00000620709 IQCF6A8MYZ5 107 aa13.44□□□□□ -0.26
CD40-207ENST00000620709 IFNL4K9M1U5 179 aa13.44□□□□□ -0.26
CD40-207ENST00000620709 MLNRO43193 412 aa13.44□□□□□ -0.26
CD40-207ENST00000620709 IRF2P14316 349 aa13.44□□□□□ -0.26
CD40-207ENST00000620709 RBP2P50120 134 aa13.44□□□□□ -0.26
CD40-207ENST00000620709 FUT6P51993 359 aa13.44□□□□□ -0.26
CD40-207ENST00000620709 MTCP1P56278 107 aa13.44□□□□□ -0.26
CD40-207ENST00000620709 PRDX4Q13162 271 aa13.44□□□□□ -0.26
CD40-207ENST00000620709 DMRTC1Q5HYR2 192 aa13.44□□□□□ -0.26
CD40-207ENST00000620709 FAM201AQ5SY85 155 aa13.44□□□□□ -0.26
CD40-207ENST00000620709 GLIPR1L1Q6UWM5 242 aa13.44□□□□□ -0.26
CD40-207ENST00000620709 OR2W3Q7Z3T1 314 aa13.44□□□□□ -0.26
CD40-207ENST00000620709 LYSMD2Q8IV50 215 aa13.44□□□□□ -0.26
CD40-207ENST00000620709 ZDHHC23Q8IYP9 409 aa13.44□□□□□ -0.26
CD40-207ENST00000620709 Q8N402 240 aa13.44□□□□□ -0.26
CD40-207ENST00000620709 DTX3Q8N9I9 347 aa13.44□□□□□ -0.26
CD40-207ENST00000620709 RFT1Q96AA3 541 aa13.44□□□□□ -0.26
CD40-207ENST00000620709 PHF21AQ96BD5 680 aa13.44□□□□□ -0.26
CD40-207ENST00000620709 FBLN5Q9UBX5 448 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms