RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 A6NDX4 124 aa9.63□□□□□ -0.87
UPF3B-204ENST00000619445 A6NIN4 97 aa9.63□□□□□ -0.87
UPF3B-204ENST00000619445 MAGEB4O15481 346 aaPredicted RBP9.63□□□□□ -0.87
UPF3B-204ENST00000619445 HAND1O96004 215 aa9.63□□□□□ -0.87
UPF3B-204ENST00000619445 OCM2P0CE71 109 aa9.63□□□□□ -0.87
UPF3B-204ENST00000619445 OCMP0CE72 109 aaPredicted RBP9.63□□□□□ -0.87
UPF3B-204ENST00000619445 GABRR1P24046 479 aa9.63□□□□□ -0.87
UPF3B-204ENST00000619445 EPHA2P29317 976 aa9.63□□□□□ -0.87
UPF3B-204ENST00000619445 ACTA2P62736 377 aa9.63□□□□□ -0.87
UPF3B-204ENST00000619445 ACTG2P63267 376 aa9.63□□□□□ -0.87
UPF3B-204ENST00000619445 BNIP1Q12981 228 aa9.63□□□□□ -0.87
UPF3B-204ENST00000619445 GRK1Q15835 563 aa9.63□□□□□ -0.87
UPF3B-204ENST00000619445 C1orf146Q5VVC0 180 aa9.63□□□□□ -0.87
UPF3B-204ENST00000619445 LHFPL2Q6ZUX7 228 aa9.63□□□□□ -0.87
UPF3B-204ENST00000619445 LHFPL4Q7Z7J7 247 aa9.63□□□□□ -0.87
UPF3B-204ENST00000619445 RTN4RL2Q86UN3 420 aa9.63□□□□□ -0.87
UPF3B-204ENST00000619445 FAM58AQ8N1B3 248 aa9.63□□□□□ -0.87
UPF3B-204ENST00000619445 ZNF676Q8N7Q3 588 aa9.63□□□□□ -0.87
UPF3B-204ENST00000619445 CAPSLQ8WWF8 208 aa9.63□□□□□ -0.87
UPF3B-204ENST00000619445 SLAMF9Q96A28 289 aa9.63□□□□□ -0.87
UPF3B-204ENST00000619445 TBX5Q99593 518 aa9.63□□□□□ -0.87
UPF3B-204ENST00000619445 CIB1Q99828 191 aa9.63□□□□□ -0.87
UPF3B-204ENST00000619445 CLEC7AQ9BXN2 247 aa9.63□□□□□ -0.87
UPF3B-204ENST00000619445 GAL3ST2Q9H3Q3 398 aa9.63□□□□□ -0.87
UPF3B-204ENST00000619445 ZNF702PQ9H963 129 aa9.63□□□□□ -0.87
UPF3B-204ENST00000619445 IMPAD1Q9NX62 359 aa9.63□□□□□ -0.87
UPF3B-204ENST00000619445 FOXJ3Q9UPW0 622 aa9.63□□□□□ -0.87
UPF3B-204ENST00000619445 UBE2J1Q9Y385 318 aaPredicted RBP9.63□□□□□ -0.87
UPF3B-204ENST00000619445 ORC6Q9Y5N6 252 aa9.63□□□□□ -0.87
UPF3B-204ENST00000619445 M0R129 80 aa9.62□□□□□ -0.87
UPF3B-204ENST00000619445 SH2D1BO14796 132 aa9.62□□□□□ -0.87
UPF3B-204ENST00000619445 ISG15P05161 165 aa9.62□□□□□ -0.87
UPF3B-204ENST00000619445 ZNF20P17024 532 aa9.62□□□□□ -0.87
UPF3B-204ENST00000619445 HTR1DP28221 377 aa9.62□□□□□ -0.87
UPF3B-204ENST00000619445 BRS3P32247 399 aa9.62□□□□□ -0.87
UPF3B-204ENST00000619445 MTCP1P56278 107 aa9.62□□□□□ -0.87
UPF3B-204ENST00000619445 ISL1P61371 349 aa9.62□□□□□ -0.87
UPF3B-204ENST00000619445 ZNF91Q05481 1191 aa9.62□□□□□ -0.87
UPF3B-204ENST00000619445 EDDM3AQ14507 147 aa9.62□□□□□ -0.87
UPF3B-204ENST00000619445 ODF4Q2M2E3 257 aa9.62□□□□□ -0.87
UPF3B-204ENST00000619445 BEAN1Q3B7T3 259 aa9.62□□□□□ -0.87
UPF3B-204ENST00000619445 FBLN7Q53RD9 439 aa9.62□□□□□ -0.87
UPF3B-204ENST00000619445 SAMD5Q5TGI4 173 aa9.62□□□□□ -0.87
UPF3B-204ENST00000619445 MEDAGQ5VYS4 303 aa9.62□□□□□ -0.87
UPF3B-204ENST00000619445 FDX2Q6P4F2 183 aa9.62□□□□□ -0.87
UPF3B-204ENST00000619445 SSX6Q7RTT6 188 aa9.62□□□□□ -0.87
UPF3B-204ENST00000619445 C1QL4Q86Z23 238 aa9.62□□□□□ -0.87
UPF3B-204ENST00000619445 NDNFQ8TB73 568 aa9.62□□□□□ -0.87
UPF3B-204ENST00000619445 ZNF596Q8TC21 504 aa9.62□□□□□ -0.87
UPF3B-204ENST00000619445 TMEM133Q9H2Q1 129 aa9.62□□□□□ -0.87
UPF3B-204ENST00000619445 SERTAD4Q9NUC0 356 aa9.62□□□□□ -0.87
UPF3B-204ENST00000619445 GNG8Q9UK08 70 aa9.62□□□□□ -0.87
UPF3B-204ENST00000619445 KIAA2026Q5HYC2 2103 aa9.61□□□□□ -0.87
UPF3B-204ENST00000619445 IGKV1-27A0A075B6S5 117 aa9.61□□□□□ -0.87
UPF3B-204ENST00000619445 TRGV10A0A0A0MS01 117 aa9.61□□□□□ -0.87
UPF3B-204ENST00000619445 IGHV2-26A0A0B4J1V2 119 aa9.61□□□□□ -0.87
UPF3B-204ENST00000619445 TMEM82A0PJX8 343 aa9.61□□□□□ -0.87
UPF3B-204ENST00000619445 CIB2O75838 187 aa9.61□□□□□ -0.87
UPF3B-204ENST00000619445 MT-ND2P03891 347 aa9.61□□□□□ -0.87
UPF3B-204ENST00000619445 CEACAM3P40198 252 aa9.61□□□□□ -0.87
UPF3B-204ENST00000619445 CCR9P51686 369 aa9.61□□□□□ -0.87
UPF3B-204ENST00000619445 P2RX3P56373 397 aa9.61□□□□□ -0.87
UPF3B-204ENST00000619445 SLC34A1Q06495 639 aa9.61□□□□□ -0.87
UPF3B-204ENST00000619445 SLC25A30Q5SVS4 291 aa9.61□□□□□ -0.87
UPF3B-204ENST00000619445 TRAPPC6BQ86SZ2 158 aa9.61□□□□□ -0.87
UPF3B-204ENST00000619445 BATF2Q8N1L9 274 aa9.61□□□□□ -0.87
UPF3B-204ENST00000619445 CHST4Q8NCG5 386 aa9.61□□□□□ -0.87
UPF3B-204ENST00000619445 OR2G2Q8NGZ5 317 aa9.61□□□□□ -0.87
UPF3B-204ENST00000619445 EME1Q96AY2 570 aa9.61□□□□□ -0.87
UPF3B-204ENST00000619445 CPNE2Q96FN4 548 aaPredicted RBP9.61□□□□□ -0.87
UPF3B-204ENST00000619445 OPALINQ96PE5 141 aa9.61□□□□□ -0.87
UPF3B-204ENST00000619445 RIBC2Q9H4K1 309 aa9.61□□□□□ -0.87
UPF3B-204ENST00000619445 TAS2R3Q9NYW6 316 aa9.61□□□□□ -0.87
UPF3B-204ENST00000619445 HHLA2Q9UM44 414 aa9.61□□□□□ -0.87
UPF3B-204ENST00000619445 FAM90A22PA8MWA6 464 aa9.6□□□□□ -0.87
UPF3B-204ENST00000619445 F8VVB4 439 aa9.6□□□□□ -0.87
UPF3B-204ENST00000619445 F8VWA3 439 aa9.6□□□□□ -0.87
UPF3B-204ENST00000619445 SLC16A6O15403 523 aa9.6□□□□□ -0.87
UPF3B-204ENST00000619445 PRKACAP17612 351 aa9.6□□□□□ -0.87
UPF3B-204ENST00000619445 ATF1P18846 271 aa9.6□□□□□ -0.87
UPF3B-204ENST00000619445 VDAC2P45880 294 aaPredicted RBP9.6□□□□□ -0.87
UPF3B-204ENST00000619445 POU3F4P49335 361 aa9.6□□□□□ -0.87
UPF3B-204ENST00000619445 BDH1Q02338 343 aa9.6□□□□□ -0.87
UPF3B-204ENST00000619445 MRPL28Q13084 256 aaKnown RBP9.6□□□□□ -0.87
UPF3B-204ENST00000619445 PDZK1IP1Q13113 114 aa9.6□□□□□ -0.87
UPF3B-204ENST00000619445 PLA1AQ53H76 456 aa9.6□□□□□ -0.87
UPF3B-204ENST00000619445 CCDC144NLQ6NUI1 221 aa9.6□□□□□ -0.87
UPF3B-204ENST00000619445 HEPN1Q6WQI6 88 aa9.6□□□□□ -0.87
UPF3B-204ENST00000619445 AMIGO2Q86SJ2 522 aa9.6□□□□□ -0.87
UPF3B-204ENST00000619445 SAXO1Q8IYX7 474 aa9.6□□□□□ -0.87
UPF3B-204ENST00000619445 DYNAPQ8N1N2 210 aa9.6□□□□□ -0.87
UPF3B-204ENST00000619445 PRSS35Q8N3Z0 413 aa9.6□□□□□ -0.87
UPF3B-204ENST00000619445 C11orf44Q8N8P7 122 aa9.6□□□□□ -0.87
UPF3B-204ENST00000619445 HAVCR2Q8TDQ0 301 aa9.6□□□□□ -0.87
UPF3B-204ENST00000619445 MBOAT4Q96T53 435 aa9.6□□□□□ -0.87
UPF3B-204ENST00000619445 WNT10AQ9GZT5 417 aa9.6□□□□□ -0.87
UPF3B-204ENST00000619445 LIN7BQ9HAP6 207 aa9.6□□□□□ -0.87
UPF3B-204ENST00000619445 HMG20AQ9NP66 347 aa9.6□□□□□ -0.87
UPF3B-204ENST00000619445 EXOSC4Q9NPD3 245 aaKnown RBP9.6□□□□□ -0.87
UPF3B-204ENST00000619445 DPM3Q9P2X0 92 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms