RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 KNG1P01042 644 aa12.64□□□□□ -0.39
SHROOM1-208ENST00000617339 CD46P15529 392 aa12.64□□□□□ -0.39
SHROOM1-208ENST00000617339 AGAP20933 346 aa12.64□□□□□ -0.39
SHROOM1-208ENST00000617339 HTR5AP47898 357 aa12.64□□□□□ -0.39
SHROOM1-208ENST00000617339 FOXG1P55316 489 aaPredicted RBP12.64□□□□□ -0.39
SHROOM1-208ENST00000617339 DSCR4P56555 118 aaPredicted RBP12.64□□□□□ -0.39
SHROOM1-208ENST00000617339 SLC16A14Q7RTX9 510 aa12.64□□□□□ -0.39
SHROOM1-208ENST00000617339 SLC25A43Q8WUT9 341 aaPredicted RBP12.64□□□□□ -0.39
SHROOM1-208ENST00000617339 ARHGAP5-AS1Q96IT6 56 aa12.64□□□□□ -0.39
SHROOM1-208ENST00000617339 TMPRSS5Q9H3S3 457 aa12.64□□□□□ -0.39
SHROOM1-208ENST00000617339 RNF122Q9H9V4 155 aa12.64□□□□□ -0.39
SHROOM1-208ENST00000617339 FBXO7Q9Y3I1 522 aa12.64□□□□□ -0.39
SHROOM1-208ENST00000617339 NTN3O00634 580 aaPredicted RBP12.63□□□□□ -0.39
SHROOM1-208ENST00000617339 KLK10O43240 276 aa12.63□□□□□ -0.39
SHROOM1-208ENST00000617339 SUMO3P55854 103 aaPredicted RBP12.63□□□□□ -0.39
SHROOM1-208ENST00000617339 MLF1P58340 268 aa12.63□□□□□ -0.39
SHROOM1-208ENST00000617339 PYY3Q5JQD4 70 aa12.63□□□□□ -0.39
SHROOM1-208ENST00000617339 OR2A2Q6IF42 318 aa12.63□□□□□ -0.39
SHROOM1-208ENST00000617339 RAB3CQ96E17 227 aa12.63□□□□□ -0.39
SHROOM1-208ENST00000617339 M0R135 149 aa12.63□□□□□ -0.39
SHROOM1-208ENST00000617339 FOLR2P14207 255 aa12.63□□□□□ -0.39
SHROOM1-208ENST00000617339 MSR1P21757 451 aa12.63□□□□□ -0.39
SHROOM1-208ENST00000617339 OPRM1P35372 400 aa12.63□□□□□ -0.39
SHROOM1-208ENST00000617339 MAGEA5P43359 124 aa12.63□□□□□ -0.39
SHROOM1-208ENST00000617339 HGFACQ04756 655 aa12.63□□□□□ -0.39
SHROOM1-208ENST00000617339 TAF9Q16594 264 aa12.63□□□□□ -0.39
SHROOM1-208ENST00000617339 SLC22A24Q8N4F4 322 aa12.63□□□□□ -0.39
SHROOM1-208ENST00000617339 FGFBP3Q8TAT2 258 aa12.63□□□□□ -0.39
SHROOM1-208ENST00000617339 ZNF799Q96GE5 643 aa12.63□□□□□ -0.39
SHROOM1-208ENST00000617339 FER1L6-AS2Q96M78 137 aa12.63□□□□□ -0.39
SHROOM1-208ENST00000617339 HDHD3Q9BSH5 251 aaPredicted RBP12.63□□□□□ -0.39
SHROOM1-208ENST00000617339 UFSP2Q9NUQ7 469 aa12.63□□□□□ -0.39
SHROOM1-208ENST00000617339 HDGFL3Q9Y3E1 203 aa12.63□□□□□ -0.39
SHROOM1-208ENST00000617339 C9orf172C9J069 976 aa12.63□□□□□ -0.39
SHROOM1-208ENST00000617339 CSTBP04080 98 aaKnown RBP12.63□□□□□ -0.39
SHROOM1-208ENST00000617339 EDN3P14138 238 aa12.63□□□□□ -0.39
SHROOM1-208ENST00000617339 BLVRBP30043 206 aaPredicted RBP12.63□□□□□ -0.39
SHROOM1-208ENST00000617339 FHITP49789 147 aa12.63□□□□□ -0.39
SHROOM1-208ENST00000617339 MMP16P51512 607 aa12.63□□□□□ -0.39
SHROOM1-208ENST00000617339 ZP4Q12836 540 aa12.63□□□□□ -0.39
SHROOM1-208ENST00000617339 OR10D4PQ8NGN7 298 aa12.63□□□□□ -0.39
SHROOM1-208ENST00000617339 OR6X1Q8NH79 312 aa12.63□□□□□ -0.39
SHROOM1-208ENST00000617339 FNDC9Q8TBE3 224 aa12.63□□□□□ -0.39
SHROOM1-208ENST00000617339 RPS4Y2Q8TD47 263 aa12.63□□□□□ -0.39
SHROOM1-208ENST00000617339 PIGCQ92535 297 aa12.63□□□□□ -0.39
SHROOM1-208ENST00000617339 OCSTAMPQ9BR26 566 aa12.63□□□□□ -0.39
SHROOM1-208ENST00000617339 KIAA2026Q5HYC2 2103 aa12.63□□□□□ -0.39
SHROOM1-208ENST00000617339 NDUFB7P17568 137 aa12.62□□□□□ -0.39
SHROOM1-208ENST00000617339 RBMXP38159 391 aaKnown RBP12.62□□□□□ -0.39
SHROOM1-208ENST00000617339 P2RY4P51582 365 aa12.62□□□□□ -0.39
SHROOM1-208ENST00000617339 MTCP1P56278 107 aa12.62□□□□□ -0.39
SHROOM1-208ENST00000617339 MEF2DQ14814 521 aa12.62□□□□□ -0.39
SHROOM1-208ENST00000617339 MARS2Q96GW9 593 aaKnown RBP12.62□□□□□ -0.39
SHROOM1-208ENST00000617339 OR10C1Q96KK4 312 aa12.62□□□□□ -0.39
SHROOM1-208ENST00000617339 SGCZQ96LD1 299 aa12.62□□□□□ -0.39
SHROOM1-208ENST00000617339 SUCNR1Q9BXA5 334 aa12.62□□□□□ -0.39
SHROOM1-208ENST00000617339 MCTS1Q9ULC4 181 aaKnown RBP12.62□□□□□ -0.39
SHROOM1-208ENST00000617339 C1QL1O75973 258 aa12.62□□□□□ -0.39
SHROOM1-208ENST00000617339 ZNF32P17041 273 aa12.62□□□□□ -0.39
SHROOM1-208ENST00000617339 HOXC12P31275 282 aa12.62□□□□□ -0.39
SHROOM1-208ENST00000617339 DRAM2Q6UX65 266 aa12.62□□□□□ -0.39
SHROOM1-208ENST00000617339 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.62□□□□□ -0.39
SHROOM1-208ENST00000617339 ADAMTS17Q8TE56 1095 aa12.62□□□□□ -0.39
SHROOM1-208ENST00000617339 TMEM59Q9BXS4 323 aa12.62□□□□□ -0.39
SHROOM1-208ENST00000617339 MEGF11A6BM72 1044 aa12.62□□□□□ -0.39
SHROOM1-208ENST00000617339 GJE1A6NN92 205 aa12.62□□□□□ -0.39
SHROOM1-208ENST00000617339 ST8SIA5O15466 376 aa12.62□□□□□ -0.39
SHROOM1-208ENST00000617339 PRH1P02810 166 aa12.62□□□□□ -0.39
SHROOM1-208ENST00000617339 FTH1P19P0C7X4 201 aa12.62□□□□□ -0.39
SHROOM1-208ENST00000617339 RRADP55042 308 aa12.62□□□□□ -0.39
SHROOM1-208ENST00000617339 SSPNQ14714 243 aa12.62□□□□□ -0.39
SHROOM1-208ENST00000617339 MIDNQ504T8 468 aa12.62□□□□□ -0.39
SHROOM1-208ENST00000617339 UNQ6494/PRO21346Q6UXR6 183 aa12.62□□□□□ -0.39
SHROOM1-208ENST00000617339 WDR54Q9H977 334 aa12.62□□□□□ -0.39
SHROOM1-208ENST00000617339 A0A1W2PNU3 283 aaPredicted RBP12.61□□□□□ -0.39
SHROOM1-208ENST00000617339 UMAD1C9J7I0 102 aa12.61□□□□□ -0.39
SHROOM1-208ENST00000617339 RAB27BO00194 218 aa12.61□□□□□ -0.39
SHROOM1-208ENST00000617339 MFNGO00587 321 aa12.61□□□□□ -0.39
SHROOM1-208ENST00000617339 DUS4LO95620 317 aaKnown RBP12.61□□□□□ -0.39
SHROOM1-208ENST00000617339 HLA-HP01893 362 aa12.61□□□□□ -0.39
SHROOM1-208ENST00000617339 DUSP1P28562 367 aa12.61□□□□□ -0.39
SHROOM1-208ENST00000617339 OR3A2P47893 321 aa12.61□□□□□ -0.39
SHROOM1-208ENST00000617339 SULT1A1P50225 295 aa12.61□□□□□ -0.39
SHROOM1-208ENST00000617339 DVL1P1P54792 670 aaPredicted RBP12.61□□□□□ -0.39
SHROOM1-208ENST00000617339 SLC25A47Q6Q0C1 308 aa12.61□□□□□ -0.39
SHROOM1-208ENST00000617339 C6orf201Q7Z4U5 140 aa12.61□□□□□ -0.39
SHROOM1-208ENST00000617339 C5orf24Q7Z6I8 188 aa12.61□□□□□ -0.39
SHROOM1-208ENST00000617339 GJC3Q8NFK1 279 aa12.61□□□□□ -0.39
SHROOM1-208ENST00000617339 SGK3Q96BR1 496 aa12.61□□□□□ -0.39
SHROOM1-208ENST00000617339 ZNF700Q9H0M5 742 aa12.61□□□□□ -0.39
SHROOM1-208ENST00000617339 LSM5Q9Y4Y9 91 aaKnown RBP12.61□□□□□ -0.39
SHROOM1-208ENST00000617339 DMRT1Q9Y5R6 373 aa12.61□□□□□ -0.39
SHROOM1-208ENST00000617339 WIPF3A6NGB9 483 aa12.61□□□□□ -0.39
SHROOM1-208ENST00000617339 NUDT19A8MXV4 375 aa12.61□□□□□ -0.39
SHROOM1-208ENST00000617339 SLC33A1O00400 549 aaPredicted RBP12.61□□□□□ -0.39
SHROOM1-208ENST00000617339 SSX2Q16385 188 aa12.61□□□□□ -0.39
SHROOM1-208ENST00000617339 ZNF674Q2M3X9 581 aa12.61□□□□□ -0.39
SHROOM1-208ENST00000617339 SSX3Q99909 188 aa12.61□□□□□ -0.39
SHROOM1-208ENST00000617339 ANGPTL4Q9BY76 406 aa12.61□□□□□ -0.39
SHROOM1-208ENST00000617339 SLC26A1Q9H2B4 701 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms