RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 ELOVL1Q9BW60 279 aa16.73■□□□□ 0.27
SPAST-203ENST00000615843 SLC45A2Q9UMX9 530 aa16.73■□□□□ 0.27
SPAST-203ENST00000615843 MRPS2Q9Y399 296 aaKnown RBP16.73■□□□□ 0.27
SPAST-203ENST00000615843 RCC1P18754 421 aaPredicted RBP16.72■□□□□ 0.27
SPAST-203ENST00000615843 NHLH1Q02575 133 aa16.72■□□□□ 0.27
SPAST-203ENST00000615843 NHLH2Q02577 135 aa16.72■□□□□ 0.27
SPAST-203ENST00000615843 DEFB108BQ8NET1 73 aa16.72■□□□□ 0.27
SPAST-203ENST00000615843 POM121L2Q96KW2 1035 aa16.72■□□□□ 0.27
SPAST-203ENST00000615843 SPACA9Q96E40 222 aaPredicted RBP16.72■□□□□ 0.27
SPAST-203ENST00000615843 ASCC3Q8N3C0 2202 aaKnown RBP16.72■□□□□ 0.27
SPAST-203ENST00000615843 ALG1L2C9J202 215 aa16.72■□□□□ 0.27
SPAST-203ENST00000615843 CHST1O43916 411 aa16.72■□□□□ 0.27
SPAST-203ENST00000615843 ZNF253O75346 499 aa16.72■□□□□ 0.27
SPAST-203ENST00000615843 CCR5P51681 352 aa16.72■□□□□ 0.27
SPAST-203ENST00000615843 TBC1D26Q86UD7 250 aa16.72■□□□□ 0.27
SPAST-203ENST00000615843 OR5AU1Q8NGC0 362 aa16.72■□□□□ 0.27
SPAST-203ENST00000615843 WDR13Q9H1Z4 485 aa16.72■□□□□ 0.27
SPAST-203ENST00000615843 TOGARAM1Q9Y4F4 1720 aa16.71■□□□□ 0.27
SPAST-203ENST00000615843 KCNAB3O43448 404 aa16.71■□□□□ 0.27
SPAST-203ENST00000615843 OR10G8Q8NGN5 311 aa16.71■□□□□ 0.27
SPAST-203ENST00000615843 RRADP55042 308 aa16.71■□□□□ 0.27
SPAST-203ENST00000615843 GNG3P63215 75 aa16.71■□□□□ 0.27
SPAST-203ENST00000615843 ZXDAP98168 799 aa16.71■□□□□ 0.27
SPAST-203ENST00000615843 ELOBQ15370 118 aa16.71■□□□□ 0.27
SPAST-203ENST00000615843 OR8B12Q8NGG6 310 aa16.71■□□□□ 0.27
SPAST-203ENST00000615843 ASB5Q8WWX0 329 aa16.71■□□□□ 0.27
SPAST-203ENST00000615843 ESRP2Q9H6T0 727 aaKnown RBP16.71■□□□□ 0.27
SPAST-203ENST00000615843 HSF4Q9ULV5 492 aa16.71■□□□□ 0.27
SPAST-203ENST00000615843 SLC2A9Q9NRM0 540 aa16.71■□□□□ 0.27
SPAST-203ENST00000615843 M0R1X1 148 aa16.71■□□□□ 0.26
SPAST-203ENST00000615843 CBR3O75828 277 aa16.71■□□□□ 0.26
SPAST-203ENST00000615843 HLA-DQB1P01920 261 aa16.71■□□□□ 0.26
SPAST-203ENST00000615843 SPCS3P61009 180 aa16.71■□□□□ 0.26
SPAST-203ENST00000615843 RHOBP62745 196 aa16.71■□□□□ 0.26
SPAST-203ENST00000615843 HLA-DRB5Q30154 266 aa16.71■□□□□ 0.26
SPAST-203ENST00000615843 SMIM21Q3B7S5 101 aa16.71■□□□□ 0.26
SPAST-203ENST00000615843 LAIR2Q6ISS4 152 aa16.71■□□□□ 0.26
SPAST-203ENST00000615843 LDLRAD3Q86YD5 345 aa16.71■□□□□ 0.26
SPAST-203ENST00000615843 MS4A3Q96HJ5 214 aa16.71■□□□□ 0.26
SPAST-203ENST00000615843 LRFN3Q9BTN0 628 aa16.71■□□□□ 0.26
SPAST-203ENST00000615843 CRYM-AS1A6NIL9 109 aa16.7■□□□□ 0.26
SPAST-203ENST00000615843 SYNGR2O43760 224 aa16.7■□□□□ 0.26
SPAST-203ENST00000615843 MLF2Q15773 248 aaPredicted RBP16.7■□□□□ 0.26
SPAST-203ENST00000615843 ISXQ2M1V0 245 aa16.7■□□□□ 0.26
SPAST-203ENST00000615843 OR2V1Q8NHB1 315 aa16.7■□□□□ 0.26
SPAST-203ENST00000615843 ANGPTL4Q9BY76 406 aa16.7■□□□□ 0.26
SPAST-203ENST00000615843 SCN1AP35498 2009 aa16.7■□□□□ 0.26
SPAST-203ENST00000615843 C11orf94C9JXX5 98 aa16.7■□□□□ 0.26
SPAST-203ENST00000615843 TIMM9Q9Y5J7 89 aa16.7■□□□□ 0.26
SPAST-203ENST00000615843 VEGFBP49765 207 aa16.7■□□□□ 0.26
SPAST-203ENST00000615843 NHLRC3Q5JS37 347 aa16.7■□□□□ 0.26
SPAST-203ENST00000615843 GOLT1BQ9Y3E0 138 aa16.7■□□□□ 0.26
SPAST-203ENST00000615843 SULT1A2P50226 295 aa16.7■□□□□ 0.26
SPAST-203ENST00000615843 VWA1Q6PCB0 445 aa16.7■□□□□ 0.26
SPAST-203ENST00000615843 ETV3LQ6ZN32 361 aa16.7■□□□□ 0.26
SPAST-203ENST00000615843 STARD4Q96DR4 205 aa16.7■□□□□ 0.26
SPAST-203ENST00000615843 MRGPRX3Q96LB0 322 aa16.7■□□□□ 0.26
SPAST-203ENST00000615843 OCIAD1Q9NX40 245 aa16.7■□□□□ 0.26
SPAST-203ENST00000615843 MBD1Q9UIS9 605 aaPredicted RBP16.7■□□□□ 0.26
SPAST-203ENST00000615843 A0A1B0GTQ1 180 aa16.69■□□□□ 0.26
SPAST-203ENST00000615843 VDAC1P21796 283 aa16.69■□□□□ 0.26
SPAST-203ENST00000615843 TMEM196Q5HYL7 178 aa16.69■□□□□ 0.26
SPAST-203ENST00000615843 PAM16Q9Y3D7 125 aa16.69■□□□□ 0.26
SPAST-203ENST00000615843 DSCR4P56555 118 aaPredicted RBP16.69■□□□□ 0.26
SPAST-203ENST00000615843 SPATA46Q5T0L3 261 aa16.69■□□□□ 0.26
SPAST-203ENST00000615843 MRGPRGQ86SM5 289 aa16.69■□□□□ 0.26
SPAST-203ENST00000615843 Q8IYB0 196 aa16.69■□□□□ 0.26
SPAST-203ENST00000615843 KLK13Q9UKR3 277 aa16.69■□□□□ 0.26
SPAST-203ENST00000615843 STARD10Q9Y365 291 aa16.69■□□□□ 0.26
SPAST-203ENST00000615843 M0R2Z0 102 aa16.69■□□□□ 0.26
SPAST-203ENST00000615843 NGFP01138 241 aa16.69■□□□□ 0.26
SPAST-203ENST00000615843 OR5AL1P0C617 328 aa16.69■□□□□ 0.26
SPAST-203ENST00000615843 CST9Q5W186 159 aa16.69■□□□□ 0.26
SPAST-203ENST00000615843 ABLIM2Q6H8Q1 611 aa16.69■□□□□ 0.26
SPAST-203ENST00000615843 ZNF774Q6NX45 483 aa16.69■□□□□ 0.26
SPAST-203ENST00000615843 ZNF552Q9H707 407 aaPredicted RBP16.69■□□□□ 0.26
SPAST-203ENST00000615843 GNB4Q9HAV0 340 aa16.69■□□□□ 0.26
SPAST-203ENST00000615843 TAAR3PQ9P1P4 343 aa16.69■□□□□ 0.26
SPAST-203ENST00000615843 VSIG8P0DPA2 414 aa16.69■□□□□ 0.26
SPAST-203ENST00000615843 BTNL3Q6UXE8 466 aa16.69■□□□□ 0.26
SPAST-203ENST00000615843 LYZL2Q7Z4W2 148 aa16.69■□□□□ 0.26
SPAST-203ENST00000615843 ATG4DQ86TL0 474 aaPredicted RBP16.69■□□□□ 0.26
SPAST-203ENST00000615843 EGLN1Q9GZT9 426 aa16.69■□□□□ 0.26
SPAST-203ENST00000615843 TWSG1Q9GZX9 223 aa16.69■□□□□ 0.26
SPAST-203ENST00000615843 SMDT1Q9H4I9 107 aa16.69■□□□□ 0.26
SPAST-203ENST00000615843 SMCHD1A6NHR9 2005 aa16.68■□□□□ 0.26
SPAST-203ENST00000615843 CD200R1LQ6Q8B3 271 aa16.68■□□□□ 0.26
SPAST-203ENST00000615843 ICAM5Q9UMF0 924 aa16.68■□□□□ 0.26
SPAST-203ENST00000615843 METTL12A8MUP2 240 aa16.68■□□□□ 0.26
SPAST-203ENST00000615843 TCF21O43680 179 aa16.68■□□□□ 0.26
SPAST-203ENST00000615843 EIF3GO75821 320 aaKnown RBP eCLIP16.68■□□□□ 0.26
SPAST-203ENST00000615843 RPS23P62266 143 aaKnown RBP16.68■□□□□ 0.26
SPAST-203ENST00000615843 UBE2ZQ9H832 354 aaPredicted RBP16.68■□□□□ 0.26
SPAST-203ENST00000615843 LGALS4P56470 323 aa16.68■□□□□ 0.26
SPAST-203ENST00000615843 TLNRD1Q9H1K6 362 aa16.68■□□□□ 0.26
SPAST-203ENST00000615843 SLX4Q8IY92 1834 aa16.68■□□□□ 0.26
SPAST-203ENST00000615843 ATP6V0CP27449 155 aa16.68■□□□□ 0.26
SPAST-203ENST00000615843 NANOS3P60323 173 aaKnown RBP16.68■□□□□ 0.26
SPAST-203ENST00000615843 WDR61Q9GZS3 305 aaKnown RBP16.68■□□□□ 0.26
SPAST-203ENST00000615843 HES4Q9HCC6 221 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms