RNA–Protein interactions for RNA: ENST00000612828.4

CNTNAP3B-211, Transcript of contactin associated protein like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 7,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-211ENST00000612828 ZNF85Q03923 595 aa9.73□□□□□ -0.85
CNTNAP3B-211ENST00000612828 BSXQ3C1V8 233 aa9.73□□□□□ -0.85
CNTNAP3B-211ENST00000612828 ZNF66Q6ZN08 573 aa9.73□□□□□ -0.85
CNTNAP3B-211ENST00000612828 LYG2Q86SG7 212 aa9.73□□□□□ -0.85
CNTNAP3B-211ENST00000612828 OR4P4Q8NGL7 312 aa9.73□□□□□ -0.85
CNTNAP3B-211ENST00000612828 LOXL4Q96JB6 756 aa9.73□□□□□ -0.85
CNTNAP3B-211ENST00000612828 C2orf88Q9BSF0 95 aa9.73□□□□□ -0.85
CNTNAP3B-211ENST00000612828 FOXJ3Q9UPW0 622 aa9.73□□□□□ -0.85
CNTNAP3B-211ENST00000612828 LINC00862A6NCI5 91 aa9.72□□□□□ -0.85
CNTNAP3B-211ENST00000612828 DLL1O00548 723 aa9.72□□□□□ -0.85
CNTNAP3B-211ENST00000612828 SMIM18P0DKX4 95 aa9.72□□□□□ -0.85
CNTNAP3B-211ENST00000612828 BRS3P32247 399 aa9.72□□□□□ -0.85
CNTNAP3B-211ENST00000612828 ERVS71-1P61550 626 aa9.72□□□□□ -0.85
CNTNAP3B-211ENST00000612828 PNRC1Q12796 327 aaPredicted RBP9.72□□□□□ -0.85
CNTNAP3B-211ENST00000612828 GATD1Q8NB37 220 aa9.72□□□□□ -0.85
CNTNAP3B-211ENST00000612828 TMEM56Q96MV1 263 aa9.72□□□□□ -0.85
CNTNAP3B-211ENST00000612828 EMC6Q9BV81 110 aa9.72□□□□□ -0.85
CNTNAP3B-211ENST00000612828 AKIP1Q9NQ31 210 aa9.72□□□□□ -0.85
CNTNAP3B-211ENST00000612828 BAZ2AQ9UIF9 1905 aaKnown RBP9.72□□□□□ -0.85
CNTNAP3B-211ENST00000612828 TAAR5O14804 337 aa9.72□□□□□ -0.85
CNTNAP3B-211ENST00000612828 ZBTB25P24278 435 aa9.72□□□□□ -0.85
CNTNAP3B-211ENST00000612828 GPR6P46095 362 aaPredicted RBP9.72□□□□□ -0.85
CNTNAP3B-211ENST00000612828 C3orf36Q3SXR2 165 aa9.72□□□□□ -0.85
CNTNAP3B-211ENST00000612828 OLIG1Q8TAK6 271 aa9.72□□□□□ -0.85
CNTNAP3B-211ENST00000612828 SLC17A9Q9BYT1 436 aa9.72□□□□□ -0.85
CNTNAP3B-211ENST00000612828 PAM16Q9Y3D7 125 aa9.72□□□□□ -0.85
CNTNAP3B-211ENST00000612828 CLDN24A6NM45 220 aa9.72□□□□□ -0.85
CNTNAP3B-211ENST00000612828 COL8A1P27658 744 aa9.72□□□□□ -0.85
CNTNAP3B-211ENST00000612828 SPATS1Q496A3 300 aa9.72□□□□□ -0.85
CNTNAP3B-211ENST00000612828 ANKRD33Q7Z3H0 272 aa9.72□□□□□ -0.85
CNTNAP3B-211ENST00000612828 NTN4Q9HB63 628 aa9.72□□□□□ -0.85
CNTNAP3B-211ENST00000612828 ZNFX1Q9P2E3 1918 aaKnown RBP9.72□□□□□ -0.85
CNTNAP3B-211ENST00000612828 IGHV3-20A0A0C4DH32 117 aa9.72□□□□□ -0.85
CNTNAP3B-211ENST00000612828 AKR7A3O95154 331 aa9.72□□□□□ -0.85
CNTNAP3B-211ENST00000612828 NAT1P18440 290 aa9.72□□□□□ -0.85
CNTNAP3B-211ENST00000612828 SSPNQ14714 243 aa9.72□□□□□ -0.85
CNTNAP3B-211ENST00000612828 OR10J3Q5JRS4 329 aa9.72□□□□□ -0.85
CNTNAP3B-211ENST00000612828 CLEC2AQ6UVW9 174 aa9.72□□□□□ -0.85
CNTNAP3B-211ENST00000612828 DLL4Q9NR61 685 aa9.72□□□□□ -0.85
CNTNAP3B-211ENST00000612828 PPM1DO15297 605 aa9.72□□□□□ -0.85
CNTNAP3B-211ENST00000612828 RIPPLY3P57055 190 aa9.72□□□□□ -0.85
CNTNAP3B-211ENST00000612828 TOMM34Q15785 309 aaPredicted RBP9.72□□□□□ -0.85
CNTNAP3B-211ENST00000612828 LYPD4Q6UWN0 246 aa9.72□□□□□ -0.85
CNTNAP3B-211ENST00000612828 STARD4Q96DR4 205 aa9.72□□□□□ -0.85
CNTNAP3B-211ENST00000612828 GPR35Q9HC97 309 aa9.72□□□□□ -0.85
CNTNAP3B-211ENST00000612828 ARFGEF2Q9Y6D5 1785 aa9.72□□□□□ -0.85
CNTNAP3B-211ENST00000612828 HEATR5AQ86XA9 2040 aa9.72□□□□□ -0.85
CNTNAP3B-211ENST00000612828 NDUFB2O95178 105 aa9.72□□□□□ -0.85
CNTNAP3B-211ENST00000612828 ADRA2AP08913 450 aa9.72□□□□□ -0.85
CNTNAP3B-211ENST00000612828 SRP9P49458 86 aaKnown RBP9.72□□□□□ -0.85
CNTNAP3B-211ENST00000612828 ATOH7Q8N100 152 aa9.72□□□□□ -0.85
CNTNAP3B-211ENST00000612828 SLCO4A1Q96BD0 722 aa9.72□□□□□ -0.85
CNTNAP3B-211ENST00000612828 RAX2Q96IS3 184 aa9.72□□□□□ -0.85
CNTNAP3B-211ENST00000612828 ST8SIA5O15466 376 aa9.71□□□□□ -0.85
CNTNAP3B-211ENST00000612828 MAS1LP35410 378 aa9.71□□□□□ -0.85
CNTNAP3B-211ENST00000612828 LIPNQ5VXI9 398 aa9.71□□□□□ -0.85
CNTNAP3B-211ENST00000612828 OR56B1Q8NGI3 324 aa9.71□□□□□ -0.85
CNTNAP3B-211ENST00000612828 NUBPLQ8TB37 319 aa9.71□□□□□ -0.85
CNTNAP3B-211ENST00000612828 ATOH8Q96SQ7 321 aa9.71□□□□□ -0.85
CNTNAP3B-211ENST00000612828 TRGV2A0A075B6R0 118 aa9.71□□□□□ -0.85
CNTNAP3B-211ENST00000612828 PGPA6NDG6 321 aa9.71□□□□□ -0.85
CNTNAP3B-211ENST00000612828 SHC1P29353 583 aa9.71□□□□□ -0.85
CNTNAP3B-211ENST00000612828 CCR6P51684 374 aa9.71□□□□□ -0.85
CNTNAP3B-211ENST00000612828 ACSM5Q6NUN0 579 aa9.71□□□□□ -0.85
CNTNAP3B-211ENST00000612828 ALKBH7Q9BT30 221 aaPredicted RBP9.71□□□□□ -0.85
CNTNAP3B-211ENST00000612828 FBXL15Q9H469 300 aa9.71□□□□□ -0.85
CNTNAP3B-211ENST00000612828 MAP1LC3AQ9H492 121 aa9.71□□□□□ -0.85
CNTNAP3B-211ENST00000612828 FRRS1LQ9P0K9 344 aa9.71□□□□□ -0.85
CNTNAP3B-211ENST00000612828 RGPD8O14715 1765 aaPredicted RBP9.71□□□□□ -0.85
CNTNAP3B-211ENST00000612828 ZFC3H1O60293 1989 aaKnown RBP9.71□□□□□ -0.85
CNTNAP3B-211ENST00000612828 A0A087X0M5 115 aa9.71□□□□□ -0.85
CNTNAP3B-211ENST00000612828 A0A1B0GX30 115 aa9.71□□□□□ -0.85
CNTNAP3B-211ENST00000612828 EREGO14944 169 aa9.71□□□□□ -0.85
CNTNAP3B-211ENST00000612828 ADAP1O75689 374 aa9.71□□□□□ -0.85
CNTNAP3B-211ENST00000612828 CD8AP01732 235 aa9.71□□□□□ -0.85
CNTNAP3B-211ENST00000612828 IGHEP01854 428 aa9.71□□□□□ -0.85
CNTNAP3B-211ENST00000612828 GLRXP35754 106 aa9.71□□□□□ -0.85
CNTNAP3B-211ENST00000612828 CLDN8P56748 225 aa9.71□□□□□ -0.85
CNTNAP3B-211ENST00000612828 VSTM2AQ8TAG5 236 aa9.71□□□□□ -0.85
CNTNAP3B-211ENST00000612828 YIPF6Q96EC8 236 aa9.71□□□□□ -0.85
CNTNAP3B-211ENST00000612828 DOK1Q99704 481 aa9.71□□□□□ -0.85
CNTNAP3B-211ENST00000612828 NKX6-2Q9C056 277 aaPredicted RBP9.71□□□□□ -0.85
CNTNAP3B-211ENST00000612828 CTDSPLO15194 276 aa9.71□□□□□ -0.86
CNTNAP3B-211ENST00000612828 HNRNPA1P09651 372 aaKnown RBP eCLIP9.71□□□□□ -0.86
CNTNAP3B-211ENST00000612828 CNR2P34972 360 aa9.71□□□□□ -0.86
CNTNAP3B-211ENST00000612828 SRSF4Q08170 494 aaKnown RBP9.71□□□□□ -0.86
CNTNAP3B-211ENST00000612828 NADSYN1Q6IA69 706 aa9.71□□□□□ -0.86
CNTNAP3B-211ENST00000612828 OPN5Q6U736 354 aa9.71□□□□□ -0.86
CNTNAP3B-211ENST00000612828 SPACA5Q96QH8 159 aa9.71□□□□□ -0.86
CNTNAP3B-211ENST00000612828 TNFRSF13CQ96RJ3 184 aa9.71□□□□□ -0.86
CNTNAP3B-211ENST00000612828 SLC25A33Q9BSK2 321 aa9.71□□□□□ -0.86
CNTNAP3B-211ENST00000612828 ZNF337Q9Y3M9 751 aa9.71□□□□□ -0.86
CNTNAP3B-211ENST00000612828 HILPDAQ9Y5L2 63 aa9.71□□□□□ -0.86
CNTNAP3B-211ENST00000612828 TYMSP04818 313 aa9.71□□□□□ -0.86
CNTNAP3B-211ENST00000612828 INSM1Q01101 510 aaPredicted RBP9.71□□□□□ -0.86
CNTNAP3B-211ENST00000612828 IL24Q13007 206 aa9.71□□□□□ -0.86
CNTNAP3B-211ENST00000612828 PDCD1Q15116 288 aa9.71□□□□□ -0.86
CNTNAP3B-211ENST00000612828 LILRB4Q8NHJ6 448 aa9.71□□□□□ -0.86
CNTNAP3B-211ENST00000612828 FAM174AQ8TBP5 190 aa9.71□□□□□ -0.86
CNTNAP3B-211ENST00000612828 ADAMTS19Q8TE59 1207 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms