RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 ZNF20P17024 532 aa7.5□□□□□ -1.21
SMAD4-217ENST00000611848 GNALP38405 381 aa7.5□□□□□ -1.21
SMAD4-217ENST00000611848 GSK3AP49840 483 aa7.5□□□□□ -1.21
SMAD4-217ENST00000611848 DSCR9P59020 149 aa7.5□□□□□ -1.21
SMAD4-217ENST00000611848 ZP1P60852 638 aa7.5□□□□□ -1.21
SMAD4-217ENST00000611848 RBMS2Q15434 407 aaKnown RBP7.5□□□□□ -1.21
SMAD4-217ENST00000611848 CLEC12BQ2HXU8 276 aa7.5□□□□□ -1.21
SMAD4-217ENST00000611848 Q6ZTK2 550 aa7.5□□□□□ -1.21
SMAD4-217ENST00000611848 SLC36A1Q7Z2H8 476 aa7.5□□□□□ -1.21
SMAD4-217ENST00000611848 SLC7A5P1Q8MH63 180 aa7.5□□□□□ -1.21
SMAD4-217ENST00000611848 OR5AS1Q8N127 324 aa7.5□□□□□ -1.21
SMAD4-217ENST00000611848 ZCCHC24Q8N2G6 241 aaKnown RBP7.5□□□□□ -1.21
SMAD4-217ENST00000611848 C9orf62Q8N4C0 152 aa7.5□□□□□ -1.21
SMAD4-217ENST00000611848 SPICQ8N5J4 248 aa7.5□□□□□ -1.21
SMAD4-217ENST00000611848 WFDC11Q8NEX6 87 aa7.5□□□□□ -1.21
SMAD4-217ENST00000611848 OR14K1Q8NGZ2 314 aa7.5□□□□□ -1.21
SMAD4-217ENST00000611848 AQP3Q92482 292 aa7.5□□□□□ -1.21
SMAD4-217ENST00000611848 CMBLQ96DG6 245 aa7.5□□□□□ -1.21
SMAD4-217ENST00000611848 Q96MF0 132 aa7.5□□□□□ -1.21
SMAD4-217ENST00000611848 POFUT1Q9H488 388 aa7.5□□□□□ -1.21
SMAD4-217ENST00000611848 GPR84Q9NQS5 396 aa7.5□□□□□ -1.21
SMAD4-217ENST00000611848 PLA2G2EQ9NZK7 142 aa7.5□□□□□ -1.21
SMAD4-217ENST00000611848 PURGQ9UJV8 347 aaKnown RBP7.5□□□□□ -1.21
SMAD4-217ENST00000611848 ZNF222Q9UK12 451 aa7.5□□□□□ -1.21
SMAD4-217ENST00000611848 HIVEP1P15822 2718 aa7.5□□□□□ -1.21
SMAD4-217ENST00000611848 A0A0U1RQV5 110 aa7.49□□□□□ -1.21
SMAD4-217ENST00000611848 METTL21EPA6NDL7 271 aa7.49□□□□□ -1.21
SMAD4-217ENST00000611848 TMEM14DPA8MWL7 114 aa7.49□□□□□ -1.21
SMAD4-217ENST00000611848 RAB27BO00194 218 aa7.49□□□□□ -1.21
SMAD4-217ENST00000611848 XRCC2O43543 280 aa7.49□□□□□ -1.21
SMAD4-217ENST00000611848 SSNA1O43805 119 aa7.49□□□□□ -1.21
SMAD4-217ENST00000611848 ZNF780AO75290 641 aaPredicted RBP7.49□□□□□ -1.21
SMAD4-217ENST00000611848 SCGNO76038 276 aa7.49□□□□□ -1.21
SMAD4-217ENST00000611848 CD74P04233 296 aa7.49□□□□□ -1.21
SMAD4-217ENST00000611848 VSIG8P0DPA2 414 aa7.49□□□□□ -1.21
SMAD4-217ENST00000611848 SLC2A1P11166 492 aa7.49□□□□□ -1.21
SMAD4-217ENST00000611848 NAT2P11245 290 aa7.49□□□□□ -1.21
SMAD4-217ENST00000611848 ANOS1P23352 680 aa7.49□□□□□ -1.21
SMAD4-217ENST00000611848 ZNF81P51508 661 aa7.49□□□□□ -1.21
SMAD4-217ENST00000611848 TAS2R19P59542 299 aa7.49□□□□□ -1.21
SMAD4-217ENST00000611848 UNC119Q13432 240 aa7.49□□□□□ -1.21
SMAD4-217ENST00000611848 GK2Q14410 553 aaPredicted RBP7.49□□□□□ -1.21
SMAD4-217ENST00000611848 ALKBH6Q3KRA9 238 aa7.49□□□□□ -1.21
SMAD4-217ENST00000611848 MOGAT2Q3SYC2 334 aa7.49□□□□□ -1.21
SMAD4-217ENST00000611848 ZNF260Q3ZCT1 412 aa7.49□□□□□ -1.21
SMAD4-217ENST00000611848 FAM209AQ5JX71 171 aa7.49□□□□□ -1.21
SMAD4-217ENST00000611848 ZNF626Q68DY1 528 aa7.49□□□□□ -1.21
SMAD4-217ENST00000611848 OR10K2Q6IF99 312 aa7.49□□□□□ -1.21
SMAD4-217ENST00000611848 STEAP1BQ6NZ63 245 aa7.49□□□□□ -1.21
SMAD4-217ENST00000611848 CLEC2AQ6UVW9 174 aa7.49□□□□□ -1.21
SMAD4-217ENST00000611848 ZNF782Q6ZMW2 699 aaPredicted RBP7.49□□□□□ -1.21
SMAD4-217ENST00000611848 FAM57BQ71RH2 274 aa7.49□□□□□ -1.21
SMAD4-217ENST00000611848 OR2W3Q7Z3T1 314 aa7.49□□□□□ -1.21
SMAD4-217ENST00000611848 CCDC54Q8NEL0 328 aa7.49□□□□□ -1.21
SMAD4-217ENST00000611848 OR4D10Q8NGI6 311 aa7.49□□□□□ -1.21
SMAD4-217ENST00000611848 OR52H1Q8NGJ2 320 aa7.49□□□□□ -1.21
SMAD4-217ENST00000611848 OR13C9Q8NGT0 318 aa7.49□□□□□ -1.21
SMAD4-217ENST00000611848 DIRC2Q96SL1 478 aa7.49□□□□□ -1.21
SMAD4-217ENST00000611848 ALX4Q9H161 411 aaPredicted RBP7.49□□□□□ -1.21
SMAD4-217ENST00000611848 OPA3Q9H6K4 179 aa7.49□□□□□ -1.21
SMAD4-217ENST00000611848 BEX1Q9HBH7 125 aa7.49□□□□□ -1.21
SMAD4-217ENST00000611848 GPN1Q9HCN4 374 aaPredicted RBP7.49□□□□□ -1.21
SMAD4-217ENST00000611848 DLL4Q9NR61 685 aa7.49□□□□□ -1.21
SMAD4-217ENST00000611848 SCP2D1Q9UJQ7 156 aa7.49□□□□□ -1.21
SMAD4-217ENST00000611848 CSPG4Q6UVK1 2322 aa7.49□□□□□ -1.21
SMAD4-217ENST00000611848 IQCF6A8MYZ5 107 aa7.49□□□□□ -1.21
SMAD4-217ENST00000611848 AKR7A2O43488 359 aa7.49□□□□□ -1.21
SMAD4-217ENST00000611848 ALX3O95076 343 aa7.49□□□□□ -1.21
SMAD4-217ENST00000611848 CD3DP04234 171 aa7.49□□□□□ -1.21
SMAD4-217ENST00000611848 ADH4P08319 380 aa7.49□□□□□ -1.21
SMAD4-217ENST00000611848 VSIG10L2P0DP72 767 aa7.49□□□□□ -1.21
SMAD4-217ENST00000611848 ANXA7P20073 488 aaKnown RBP7.49□□□□□ -1.21
SMAD4-217ENST00000611848 ZNF93P35789 620 aaPredicted RBP7.49□□□□□ -1.21
SMAD4-217ENST00000611848 PDLIM4P50479 330 aa7.49□□□□□ -1.21
SMAD4-217ENST00000611848 HLXQ14774 488 aaPredicted RBP7.49□□□□□ -1.21
SMAD4-217ENST00000611848 SNAI3Q3KNW1 292 aa7.49□□□□□ -1.21
SMAD4-217ENST00000611848 OR2T2Q6IF00 324 aa7.49□□□□□ -1.21
SMAD4-217ENST00000611848 NLRC3Q7RTR2 1065 aa7.49□□□□□ -1.21
SMAD4-217ENST00000611848 MRPL21Q7Z2W9 205 aaKnown RBP7.49□□□□□ -1.21
SMAD4-217ENST00000611848 OR8G5Q8NG78 346 aa7.49□□□□□ -1.21
SMAD4-217ENST00000611848 GRPEL2Q8TAA5 225 aa7.49□□□□□ -1.21
SMAD4-217ENST00000611848 FAM168AQ92567 244 aa7.49□□□□□ -1.21
SMAD4-217ENST00000611848 FAM46BQ96A09 425 aa7.49□□□□□ -1.21
SMAD4-217ENST00000611848 PGAM5Q96HS1 289 aa7.49□□□□□ -1.21
SMAD4-217ENST00000611848 LYZL4Q96KX0 146 aa7.49□□□□□ -1.21
SMAD4-217ENST00000611848 C1orf147Q96MC9 270 aaPredicted RBP7.49□□□□□ -1.21
SMAD4-217ENST00000611848 SEC22CQ9BRL7 303 aa7.49□□□□□ -1.21
SMAD4-217ENST00000611848 GINS4Q9BRT9 223 aa7.49□□□□□ -1.21
SMAD4-217ENST00000611848 SOX7Q9BT81 388 aa7.49□□□□□ -1.21
SMAD4-217ENST00000611848 ZNF436Q9C0F3 470 aaPredicted RBP7.49□□□□□ -1.21
SMAD4-217ENST00000611848 OR10A2Q9H208 303 aa7.49□□□□□ -1.21
SMAD4-217ENST00000611848 ZDHHC8Q9ULC8 765 aa7.49□□□□□ -1.21
SMAD4-217ENST00000611848 V9GYS6 101 aa7.49□□□□□ -1.21
SMAD4-217ENST00000611848 ABCA1O95477 2261 aa7.48□□□□□ -1.21
SMAD4-217ENST00000611848 IGKV1-9A0A0C4DH69 117 aa7.48□□□□□ -1.21
SMAD4-217ENST00000611848 C5orf63A6NC05 138 aa7.48□□□□□ -1.21
SMAD4-217ENST00000611848 MEIS3P1A6NDR6 274 aa7.48□□□□□ -1.21
SMAD4-217ENST00000611848 G3V3Q6 166 aa7.48□□□□□ -1.21
SMAD4-217ENST00000611848 NDUFS8O00217 210 aa7.48□□□□□ -1.21
SMAD4-217ENST00000611848 CREBL2O60519 120 aaPredicted RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms