RNA–Protein interactions for RNA: ENST00000608461.1

HDDC2-206, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-206ENST00000608461 IGFBP3P17936 291 aaPredicted RBP11.77□□□□□ -0.53
HDDC2-206ENST00000608461 FSTP19883 344 aa11.77□□□□□ -0.53
HDDC2-206ENST00000608461 BCL3P20749 454 aa11.77□□□□□ -0.53
HDDC2-206ENST00000608461 BDKRB2P30411 391 aa11.77□□□□□ -0.53
HDDC2-206ENST00000608461 MTNR1BP49286 362 aa11.77□□□□□ -0.53
HDDC2-206ENST00000608461 CAPZA1P52907 286 aa11.77□□□□□ -0.53
HDDC2-206ENST00000608461 GUCA2AQ02747 115 aa11.77□□□□□ -0.53
HDDC2-206ENST00000608461 ELP2Q6IA86 826 aa11.77□□□□□ -0.53
HDDC2-206ENST00000608461 CRIP3Q6Q6R5 217 aa11.77□□□□□ -0.53
HDDC2-206ENST00000608461 PPP1R35Q8TAP8 253 aa11.77□□□□□ -0.53
HDDC2-206ENST00000608461 SNX22Q96L94 193 aa11.77□□□□□ -0.53
HDDC2-206ENST00000608461 CNBD2Q96M20 576 aa11.77□□□□□ -0.53
HDDC2-206ENST00000608461 TBX15Q96SF7 602 aa11.77□□□□□ -0.53
HDDC2-206ENST00000608461 GPER1Q99527 375 aa11.77□□□□□ -0.53
HDDC2-206ENST00000608461 PCDHB16Q9NRJ7 776 aa11.77□□□□□ -0.53
HDDC2-206ENST00000608461 RBFOX1Q9NWB1 397 aaKnown RBP11.77□□□□□ -0.53
HDDC2-206ENST00000608461 PAK1IP1Q9NWT1 392 aaPredicted RBP11.77□□□□□ -0.53
HDDC2-206ENST00000608461 TAS2R4Q9NYW5 299 aa11.77□□□□□ -0.53
HDDC2-206ENST00000608461 LSM2Q9Y333 95 aaKnown RBP11.77□□□□□ -0.53
HDDC2-206ENST00000608461 RRP15Q9Y3B9 282 aaKnown RBP11.77□□□□□ -0.53
HDDC2-206ENST00000608461 TRBV5-7A0A0A0MS05 114 aa11.76□□□□□ -0.53
HDDC2-206ENST00000608461 TRAV40A0A0B4J280 105 aa11.76□□□□□ -0.53
HDDC2-206ENST00000608461 IGKV1-12A0A0C4DH73 117 aa11.76□□□□□ -0.53
HDDC2-206ENST00000608461 A0A1W2PQ09 198 aa11.76□□□□□ -0.53
HDDC2-206ENST00000608461 ZNF737O75373 536 aa11.76□□□□□ -0.53
HDDC2-206ENST00000608461 HAND1O96004 215 aa11.76□□□□□ -0.53
HDDC2-206ENST00000608461 IGKV1D-12P01611 117 aa11.76□□□□□ -0.53
HDDC2-206ENST00000608461 IGHV4-38-2P0DP08 117 aa11.76□□□□□ -0.53
HDDC2-206ENST00000608461 PRKACAP17612 351 aa11.76□□□□□ -0.53
HDDC2-206ENST00000608461 LMO1P25800 156 aa11.76□□□□□ -0.53
HDDC2-206ENST00000608461 ZNF93P35789 620 aaPredicted RBP11.76□□□□□ -0.53
HDDC2-206ENST00000608461 NPBWR2P48146 333 aa11.76□□□□□ -0.53
HDDC2-206ENST00000608461 RPL31P62899 125 aaKnown RBP11.76□□□□□ -0.53
HDDC2-206ENST00000608461 COL10A1Q03692 680 aa11.76□□□□□ -0.53
HDDC2-206ENST00000608461 DOC2BQ14184 412 aa11.76□□□□□ -0.53
HDDC2-206ENST00000608461 MED22Q15528 200 aa11.76□□□□□ -0.53
HDDC2-206ENST00000608461 TRAM1Q15629 374 aa11.76□□□□□ -0.53
HDDC2-206ENST00000608461 NCR3LG1Q68D85 454 aa11.76□□□□□ -0.53
HDDC2-206ENST00000608461 ASPHD2Q6ICH7 369 aa11.76□□□□□ -0.53
HDDC2-206ENST00000608461 ASCL4Q6XD76 172 aa11.76□□□□□ -0.53
HDDC2-206ENST00000608461 OR8H2Q8N162 312 aa11.76□□□□□ -0.53
HDDC2-206ENST00000608461 FGFRL1Q8N441 504 aa11.76□□□□□ -0.53
HDDC2-206ENST00000608461 ZFP41Q8N8Y5 198 aa11.76□□□□□ -0.53
HDDC2-206ENST00000608461 CHST4Q8NCG5 386 aa11.76□□□□□ -0.53
HDDC2-206ENST00000608461 Q8NFD4 153 aa11.76□□□□□ -0.53
HDDC2-206ENST00000608461 RFT1Q96AA3 541 aa11.76□□□□□ -0.53
HDDC2-206ENST00000608461 SPACA5Q96QH8 159 aa11.76□□□□□ -0.53
HDDC2-206ENST00000608461 PRDM13Q9H4Q3 707 aa11.76□□□□□ -0.53
HDDC2-206ENST00000608461 METTL8Q9H825 291 aaKnown RBP11.76□□□□□ -0.53
HDDC2-206ENST00000608461 ZMAT3Q9HA38 289 aaKnown RBP11.76□□□□□ -0.53
HDDC2-206ENST00000608461 ONECUT1Q9UBC0 465 aa11.76□□□□□ -0.53
HDDC2-206ENST00000608461 ZNF69Q9UC07 566 aa11.76□□□□□ -0.53
HDDC2-206ENST00000608461 CENPVL3A0A0U1RRI6 287 aa11.75□□□□□ -0.53
HDDC2-206ENST00000608461 MEGF11A6BM72 1044 aa11.75□□□□□ -0.53
HDDC2-206ENST00000608461 TRIM77I1YAP6 450 aa11.75□□□□□ -0.53
HDDC2-206ENST00000608461 ANGPTL7O43827 346 aa11.75□□□□□ -0.53
HDDC2-206ENST00000608461 ZNF780AO75290 641 aaPredicted RBP11.75□□□□□ -0.53
HDDC2-206ENST00000608461 TFF1P04155 84 aa11.75□□□□□ -0.53
HDDC2-206ENST00000608461 SFTPBP07988 381 aa11.75□□□□□ -0.53
HDDC2-206ENST00000608461 ERP29P30040 261 aaKnown RBP11.75□□□□□ -0.53
HDDC2-206ENST00000608461 TGFBR2P37173 567 aa11.75□□□□□ -0.53
HDDC2-206ENST00000608461 PTGFRP43088 359 aa11.75□□□□□ -0.53
HDDC2-206ENST00000608461 MEF2CQ06413 473 aaPredicted RBP11.75□□□□□ -0.53
HDDC2-206ENST00000608461 GDPD3Q7L5L3 318 aa11.75□□□□□ -0.53
HDDC2-206ENST00000608461 VMO1Q7Z5L0 202 aa11.75□□□□□ -0.53
HDDC2-206ENST00000608461 SATL1Q86VE3 508 aa11.75□□□□□ -0.53
HDDC2-206ENST00000608461 ASCC1Q8N9N2 400 aaKnown RBP11.75□□□□□ -0.53
HDDC2-206ENST00000608461 OR52N4Q8NGI2 321 aa11.75□□□□□ -0.53
HDDC2-206ENST00000608461 OR51A2Q8NGJ7 313 aa11.75□□□□□ -0.53
HDDC2-206ENST00000608461 OR5D18Q8NGL1 313 aa11.75□□□□□ -0.53
HDDC2-206ENST00000608461 DERL3Q96Q80 235 aa11.75□□□□□ -0.53
HDDC2-206ENST00000608461 OR14A2Q96R54 314 aa11.75□□□□□ -0.53
HDDC2-206ENST00000608461 SLC6A7Q99884 636 aa11.75□□□□□ -0.53
HDDC2-206ENST00000608461 YTHDF1Q9BYJ9 559 aaKnown RBP11.75□□□□□ -0.53
HDDC2-206ENST00000608461 EXOSC4Q9NPD3 245 aaKnown RBP11.75□□□□□ -0.53
HDDC2-206ENST00000608461 IL36GQ9NZH8 169 aa11.75□□□□□ -0.53
HDDC2-206ENST00000608461 IGHV1-69DA0A0B4J2H0 117 aa11.74□□□□□ -0.53
HDDC2-206ENST00000608461 FUOMA2VDF0 154 aa11.74□□□□□ -0.53
HDDC2-206ENST00000608461 RNF212BA8MTL3 300 aa11.74□□□□□ -0.53
HDDC2-206ENST00000608461 GABRPO00591 440 aa11.74□□□□□ -0.53
HDDC2-206ENST00000608461 MGST3O14880 152 aa11.74□□□□□ -0.53
HDDC2-206ENST00000608461 INMTO95050 263 aa11.74□□□□□ -0.53
HDDC2-206ENST00000608461 IGHV1-69P01742 117 aa11.74□□□□□ -0.53
HDDC2-206ENST00000608461 RBP4P02753 201 aa11.74□□□□□ -0.53
HDDC2-206ENST00000608461 PRTN3P24158 256 aa11.74□□□□□ -0.53
HDDC2-206ENST00000608461 PSMA1P25786 263 aaKnown RBP11.74□□□□□ -0.53
HDDC2-206ENST00000608461 CEBPDP49716 269 aaPredicted RBP11.74□□□□□ -0.53
HDDC2-206ENST00000608461 GABARAPL2P60520 117 aa11.74□□□□□ -0.53
HDDC2-206ENST00000608461 MLLT11Q13015 90 aaPredicted RBP11.74□□□□□ -0.53
HDDC2-206ENST00000608461 TPBGQ13641 420 aa11.74□□□□□ -0.53
HDDC2-206ENST00000608461 GPR176Q14439 515 aa11.74□□□□□ -0.53
HDDC2-206ENST00000608461 RSU1Q15404 277 aa11.74□□□□□ -0.53
HDDC2-206ENST00000608461 DDI2Q5TDH0 399 aa11.74□□□□□ -0.53
HDDC2-206ENST00000608461 UNQ9370/PRO34162Q6UXP9 181 aa11.74□□□□□ -0.53
HDDC2-206ENST00000608461 C17orf107Q6ZR85 190 aa11.74□□□□□ -0.53
HDDC2-206ENST00000608461 BATF2Q8N1L9 274 aa11.74□□□□□ -0.53
HDDC2-206ENST00000608461 Q8N7P7 452 aa11.74□□□□□ -0.53
HDDC2-206ENST00000608461 NKAIN3Q8N8D7 197 aa11.74□□□□□ -0.53
HDDC2-206ENST00000608461 OR51T1Q8NGJ9 327 aa11.74□□□□□ -0.53
HDDC2-206ENST00000608461 OR13C5Q8NGS8 318 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms