RNA–Protein interactions for RNA: ENST00000607448.5

LINC01001-203, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 1,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-203ENST00000607448 VSIG4Q9Y279 399 aa9.07□□□□□ -0.96
LINC01001-203ENST00000607448 MRPS28Q9Y2Q9 187 aaKnown RBP9.07□□□□□ -0.96
LINC01001-203ENST00000607448 RNF115Q9Y4L5 304 aa9.07□□□□□ -0.96
LINC01001-203ENST00000607448 SLC25A15Q9Y619 301 aa9.07□□□□□ -0.96
LINC01001-203ENST00000607448 USF3Q68DE3 2245 aa9.07□□□□□ -0.96
LINC01001-203ENST00000607448 MTORP42345 2549 aa9.07□□□□□ -0.96
LINC01001-203ENST00000607448 TRAV14DV4A0A0A6YYC5 116 aa9.07□□□□□ -0.96
LINC01001-203ENST00000607448 KANTRA0A1W2PQU2 76 aa9.07□□□□□ -0.96
LINC01001-203ENST00000607448 C9orf170A2RU37 121 aa9.07□□□□□ -0.96
LINC01001-203ENST00000607448 OR5H14A6NHG9 310 aa9.07□□□□□ -0.96
LINC01001-203ENST00000607448 SHISA9B4DS77 424 aa9.07□□□□□ -0.96
LINC01001-203ENST00000607448 SMPD2O60906 423 aa9.07□□□□□ -0.96
LINC01001-203ENST00000607448 VAMP5O95183 116 aa9.07□□□□□ -0.96
LINC01001-203ENST00000607448 HLA-AP01891 365 aaKnown RBP9.07□□□□□ -0.96
LINC01001-203ENST00000607448 APOC1P02654 83 aa9.07□□□□□ -0.96
LINC01001-203ENST00000607448 SOD3P08294 240 aa9.07□□□□□ -0.96
LINC01001-203ENST00000607448 ZNF250P15622 560 aa9.07□□□□□ -0.96
LINC01001-203ENST00000607448 GUCA1AP43080 201 aaPredicted RBP9.07□□□□□ -0.96
LINC01001-203ENST00000607448 ZNF133P52736 654 aaPredicted RBP9.07□□□□□ -0.96
LINC01001-203ENST00000607448 ARL6IP1Q15041 203 aa9.07□□□□□ -0.96
LINC01001-203ENST00000607448 Q5PR19 223 aa9.07□□□□□ -0.96
LINC01001-203ENST00000607448 VAX1Q5SQQ9 334 aa9.07□□□□□ -0.96
LINC01001-203ENST00000607448 ZNF660Q6AZW8 331 aaPredicted RBP9.07□□□□□ -0.96
LINC01001-203ENST00000607448 C11orf87Q6NUJ2 197 aa9.07□□□□□ -0.96
LINC01001-203ENST00000607448 FOXL2NBQ6ZUU3 175 aa9.07□□□□□ -0.96
LINC01001-203ENST00000607448 AAED1Q7RTV5 226 aa9.07□□□□□ -0.96
LINC01001-203ENST00000607448 NAA40Q86UY6 237 aa9.07□□□□□ -0.96
LINC01001-203ENST00000607448 ANGPTL5Q86XS5 388 aa9.07□□□□□ -0.96
LINC01001-203ENST00000607448 OR5AS1Q8N127 324 aa9.07□□□□□ -0.96
LINC01001-203ENST00000607448 CIARTQ8N365 385 aaPredicted RBP9.07□□□□□ -0.96
LINC01001-203ENST00000607448 ARRDC1Q8N5I2 433 aa9.07□□□□□ -0.96
LINC01001-203ENST00000607448 ZNF611Q8N823 705 aa9.07□□□□□ -0.96
LINC01001-203ENST00000607448 OR8B12Q8NGG6 310 aa9.07□□□□□ -0.96
LINC01001-203ENST00000607448 OR56B1Q8NGI3 324 aa9.07□□□□□ -0.96
LINC01001-203ENST00000607448 COQ8AQ8NI60 647 aa9.07□□□□□ -0.96
LINC01001-203ENST00000607448 PIGTQ969N2 578 aa9.07□□□□□ -0.96
LINC01001-203ENST00000607448 PHYHIPLQ96FC7 376 aa9.07□□□□□ -0.96
LINC01001-203ENST00000607448 ALKBH3Q96Q83 286 aaPredicted RBP9.07□□□□□ -0.96
LINC01001-203ENST00000607448 NKX3-1Q99801 234 aaPredicted RBP9.07□□□□□ -0.96
LINC01001-203ENST00000607448 GAL3ST1Q99999 423 aa9.07□□□□□ -0.96
LINC01001-203ENST00000607448 URM1Q9BTM9 101 aaKnown RBP9.07□□□□□ -0.96
LINC01001-203ENST00000607448 PDCD10Q9BUL8 212 aa9.07□□□□□ -0.96
LINC01001-203ENST00000607448 SF3B5Q9BWJ5 86 aaKnown RBP9.07□□□□□ -0.96
LINC01001-203ENST00000607448 C1QTNF6Q9BXI9 259 aa9.07□□□□□ -0.96
LINC01001-203ENST00000607448 PPA2Q9H2U2 334 aa9.07□□□□□ -0.96
LINC01001-203ENST00000607448 ESRP2Q9H6T0 727 aaKnown RBP9.07□□□□□ -0.96
LINC01001-203ENST00000607448 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.07□□□□□ -0.96
LINC01001-203ENST00000607448 TNFSF18Q9UNG2 199 aa9.07□□□□□ -0.96
LINC01001-203ENST00000607448 LAMP3Q9UQV4 416 aa9.07□□□□□ -0.96
LINC01001-203ENST00000607448 CR1P17927 2039 aa9.06□□□□□ -0.96
LINC01001-203ENST00000607448 PLCE1Q9P212 2302 aa9.06□□□□□ -0.96
LINC01001-203ENST00000607448 A0A0B4J2A0 478 aa9.06□□□□□ -0.96
LINC01001-203ENST00000607448 A8MXK9 166 aa9.06□□□□□ -0.96
LINC01001-203ENST00000607448 ABCD4O14678 606 aa9.06□□□□□ -0.96
LINC01001-203ENST00000607448 BCL2L11O43521 198 aa9.06□□□□□ -0.96
LINC01001-203ENST00000607448 DUS4LO95620 317 aaKnown RBP9.06□□□□□ -0.96
LINC01001-203ENST00000607448 FCER2P06734 321 aa9.06□□□□□ -0.96
LINC01001-203ENST00000607448 CD3EP07766 207 aa9.06□□□□□ -0.96
LINC01001-203ENST00000607448 QDPRP09417 244 aa9.06□□□□□ -0.96
LINC01001-203ENST00000607448 DANCRP0C864 163 aa9.06□□□□□ -0.96
LINC01001-203ENST00000607448 HIST1H1DP16402 221 aaKnown RBP9.06□□□□□ -0.96
LINC01001-203ENST00000607448 THBS4P35443 961 aa9.06□□□□□ -0.96
LINC01001-203ENST00000607448 NUP62P37198 522 aaPredicted RBP9.06□□□□□ -0.96
LINC01001-203ENST00000607448 CX3CR1P49238 355 aa9.06□□□□□ -0.96
LINC01001-203ENST00000607448 ZNF83P51522 516 aa9.06□□□□□ -0.96
LINC01001-203ENST00000607448 ZNF121P58317 390 aaPredicted RBP9.06□□□□□ -0.96
LINC01001-203ENST00000607448 ZNF672Q499Z4 452 aaPredicted RBP9.06□□□□□ -0.96
LINC01001-203ENST00000607448 C10orf128Q5T292 105 aa9.06□□□□□ -0.96
LINC01001-203ENST00000607448 GLIPR1L1Q6UWM5 242 aa9.06□□□□□ -0.96
LINC01001-203ENST00000607448 ALKAL2Q6UX46 152 aa9.06□□□□□ -0.96
LINC01001-203ENST00000607448 ABHD12BQ7Z5M8 362 aaPredicted RBP9.06□□□□□ -0.96
LINC01001-203ENST00000607448 COMMD2Q86X83 199 aa9.06□□□□□ -0.96
LINC01001-203ENST00000607448 HOGA1Q86XE5 327 aa9.06□□□□□ -0.96
LINC01001-203ENST00000607448 ZNF101Q8IZC7 436 aa9.06□□□□□ -0.96
LINC01001-203ENST00000607448 ZNF283Q8N7M2 679 aa9.06□□□□□ -0.96
LINC01001-203ENST00000607448 WDR31Q8NA23 367 aa9.06□□□□□ -0.96
LINC01001-203ENST00000607448 PNLDC1Q8NA58 520 aaKnown RBP9.06□□□□□ -0.96
LINC01001-203ENST00000607448 OR4S1Q8NGB4 309 aa9.06□□□□□ -0.96
LINC01001-203ENST00000607448 C10orf35Q96D05 121 aa9.06□□□□□ -0.96
LINC01001-203ENST00000607448 RAB3CQ96E17 227 aa9.06□□□□□ -0.96
LINC01001-203ENST00000607448 SELENOIQ9C0D9 397 aa9.06□□□□□ -0.96
LINC01001-203ENST00000607448 DNTTIP1Q9H147 329 aa9.06□□□□□ -0.96
LINC01001-203ENST00000607448 LPAR5Q9H1C0 372 aa9.06□□□□□ -0.96
LINC01001-203ENST00000607448 ZMAT3Q9HA38 289 aaKnown RBP9.06□□□□□ -0.96
LINC01001-203ENST00000607448 PNRC2Q9NPJ4 139 aaKnown RBP9.06□□□□□ -0.96
LINC01001-203ENST00000607448 GPR84Q9NQS5 396 aa9.06□□□□□ -0.96
LINC01001-203ENST00000607448 PARPBPQ9NWS1 579 aa9.06□□□□□ -0.96
LINC01001-203ENST00000607448 MYEF2Q9P2K5 600 aaKnown RBP9.06□□□□□ -0.96
LINC01001-203ENST00000607448 SHPKQ9UHJ6 478 aa9.06□□□□□ -0.96
LINC01001-203ENST00000607448 SPEF1Q9Y4P9 236 aa9.06□□□□□ -0.96
LINC01001-203ENST00000607448 CUBNO60494 3623 aa9.06□□□□□ -0.96
LINC01001-203ENST00000607448 A0A0U1RQV5 110 aa9.05□□□□□ -0.96
LINC01001-203ENST00000607448 CEACAM18A8MTB9 384 aa9.05□□□□□ -0.96
LINC01001-203ENST00000607448 BET1O15155 118 aa9.05□□□□□ -0.96
LINC01001-203ENST00000607448 CDC14BO60729 498 aa9.05□□□□□ -0.96
LINC01001-203ENST00000607448 CA11O75493 328 aa9.05□□□□□ -0.96
LINC01001-203ENST00000607448 FGF2P09038 288 aa9.05□□□□□ -0.96
LINC01001-203ENST00000607448 MSR1P21757 451 aa9.05□□□□□ -0.96
LINC01001-203ENST00000607448 HRH1P35367 487 aa9.05□□□□□ -0.96
LINC01001-203ENST00000607448 CDKN1AP38936 164 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms