RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 TP53I3Q53FA7 332 aa6.14□□□□□ -1.43
CUX1-219ENST00000606749 MINOS1Q5TGZ0 78 aa6.14□□□□□ -1.43
CUX1-219ENST00000606749 TMEM244Q5VVB8 128 aa6.14□□□□□ -1.43
CUX1-219ENST00000606749 FDX2Q6P4F2 183 aa6.14□□□□□ -1.43
CUX1-219ENST00000606749 Q6ZS46 218 aa6.14□□□□□ -1.43
CUX1-219ENST00000606749 KCTD20Q7Z5Y7 419 aa6.14□□□□□ -1.43
CUX1-219ENST00000606749 TMEM219Q86XT9 240 aa6.14□□□□□ -1.43
CUX1-219ENST00000606749 Q8IYB0 196 aa6.14□□□□□ -1.43
CUX1-219ENST00000606749 FAM58AQ8N1B3 248 aa6.14□□□□□ -1.43
CUX1-219ENST00000606749 TPRX1Q8N7U7 411 aa6.14□□□□□ -1.43
CUX1-219ENST00000606749 DNAAF1Q8NEP3 725 aa6.14□□□□□ -1.43
CUX1-219ENST00000606749 OR4S1Q8NGB4 309 aa6.14□□□□□ -1.43
CUX1-219ENST00000606749 OR2G2Q8NGZ5 317 aa6.14□□□□□ -1.43
CUX1-219ENST00000606749 TRUB1Q8WWH5 349 aaKnown RBP6.14□□□□□ -1.43
CUX1-219ENST00000606749 PP6455Q8WZ26 134 aa6.14□□□□□ -1.43
CUX1-219ENST00000606749 EMG1Q92979 244 aaKnown RBP6.14□□□□□ -1.43
CUX1-219ENST00000606749 FGGYQ96C11 551 aa6.14□□□□□ -1.43
CUX1-219ENST00000606749 FOXRED1Q96CU9 486 aaPredicted RBP6.14□□□□□ -1.43
CUX1-219ENST00000606749 ADAT3Q96EY9 351 aaPredicted RBP6.14□□□□□ -1.43
CUX1-219ENST00000606749 BORCS8Q96FH0 119 aa6.14□□□□□ -1.43
CUX1-219ENST00000606749 ZNF714Q96N38 554 aa6.14□□□□□ -1.43
CUX1-219ENST00000606749 CHST6Q9GZX3 395 aa6.14□□□□□ -1.43
CUX1-219ENST00000606749 RIBC2Q9H4K1 309 aa6.14□□□□□ -1.43
CUX1-219ENST00000606749 ABCB10Q9NRK6 738 aa6.14□□□□□ -1.43
CUX1-219ENST00000606749 RBFOX1Q9NWB1 397 aaKnown RBP6.14□□□□□ -1.43
CUX1-219ENST00000606749 FRRS1LQ9P0K9 344 aa6.14□□□□□ -1.43
CUX1-219ENST00000606749 IL36RNQ9UBH0 155 aa6.14□□□□□ -1.43
CUX1-219ENST00000606749 GNG8Q9UK08 70 aa6.14□□□□□ -1.43
CUX1-219ENST00000606749 HILPDAQ9Y5L2 63 aa6.14□□□□□ -1.43
CUX1-219ENST00000606749 LINC00312Q9Y6C7 94 aa6.14□□□□□ -1.43
CUX1-219ENST00000606749 MINOS1-NBL1R4GNA1 71 aa6.14□□□□□ -1.43
CUX1-219ENST00000606749 IGHV2-26A0A0B4J1V2 119 aa6.13□□□□□ -1.43
CUX1-219ENST00000606749 TRBV2A0A0J9YWF9 115 aa6.13□□□□□ -1.43
CUX1-219ENST00000606749 SAC3D1A6NKF1 404 aa6.13□□□□□ -1.43
CUX1-219ENST00000606749 FAM90A22PA8MWA6 464 aa6.13□□□□□ -1.43
CUX1-219ENST00000606749 J3QRE1 110 aa6.13□□□□□ -1.43
CUX1-219ENST00000606749 SH2D1BO14796 132 aa6.13□□□□□ -1.43
CUX1-219ENST00000606749 ENTPD6O75354 484 aa6.13□□□□□ -1.43
CUX1-219ENST00000606749 FBXO24O75426 580 aa6.13□□□□□ -1.43
CUX1-219ENST00000606749 MMP23AO75900 390 aa6.13□□□□□ -1.43
CUX1-219ENST00000606749 CD28P10747 220 aa6.13□□□□□ -1.43
CUX1-219ENST00000606749 JUNBP17275 347 aaPredicted RBP6.13□□□□□ -1.43
CUX1-219ENST00000606749 PRKACBP22694 351 aa6.13□□□□□ -1.43
CUX1-219ENST00000606749 GABRR1P24046 479 aa6.13□□□□□ -1.43
CUX1-219ENST00000606749 ERP29P30040 261 aaKnown RBP6.13□□□□□ -1.43
CUX1-219ENST00000606749 CDC42P60953 191 aa6.13□□□□□ -1.43
CUX1-219ENST00000606749 BLCAPP62952 87 aa6.13□□□□□ -1.43
CUX1-219ENST00000606749 EMX1Q04741 257 aaPredicted RBP6.13□□□□□ -1.43
CUX1-219ENST00000606749 ZNF91Q05481 1191 aa6.13□□□□□ -1.43
CUX1-219ENST00000606749 PDZK1IP1Q13113 114 aa6.13□□□□□ -1.43
CUX1-219ENST00000606749 GRK1Q15835 563 aa6.13□□□□□ -1.43
CUX1-219ENST00000606749 BEAN1Q3B7T3 259 aa6.13□□□□□ -1.43
CUX1-219ENST00000606749 SLC25A30Q5SVS4 291 aa6.13□□□□□ -1.43
CUX1-219ENST00000606749 SAMD5Q5TGI4 173 aa6.13□□□□□ -1.43
CUX1-219ENST00000606749 UTS2BQ765I0 119 aa6.13□□□□□ -1.43
CUX1-219ENST00000606749 FAM220AQ7Z4H9 259 aa6.13□□□□□ -1.43
CUX1-219ENST00000606749 LYG1Q8N1E2 194 aa6.13□□□□□ -1.43
CUX1-219ENST00000606749 ZNF676Q8N7Q3 588 aa6.13□□□□□ -1.43
CUX1-219ENST00000606749 WIPF2Q8TF74 440 aaPredicted RBP6.13□□□□□ -1.43
CUX1-219ENST00000606749 HRASLS5Q96KN8 279 aa6.13□□□□□ -1.43
CUX1-219ENST00000606749 MBOAT4Q96T53 435 aa6.13□□□□□ -1.43
CUX1-219ENST00000606749 PRSS22Q9GZN4 317 aa6.13□□□□□ -1.43
CUX1-219ENST00000606749 WNT10AQ9GZT5 417 aa6.13□□□□□ -1.43
CUX1-219ENST00000606749 HMG20AQ9NP66 347 aa6.13□□□□□ -1.43
CUX1-219ENST00000606749 GLS2Q9UI32 602 aa6.13□□□□□ -1.43
CUX1-219ENST00000606749 PITPNC1Q9UKF7 332 aa6.13□□□□□ -1.43
CUX1-219ENST00000606749 SESN1Q9Y6P5 492 aa6.13□□□□□ -1.43
CUX1-219ENST00000606749 DSCAML1Q8TD84 2053 aa6.13□□□□□ -1.43
CUX1-219ENST00000606749 IGKV1-12A0A0C4DH73 117 aa6.12□□□□□ -1.43
CUX1-219ENST00000606749 DAPL1A0PJW8 107 aa6.12□□□□□ -1.43
CUX1-219ENST00000606749 E9PQ18 207 aa6.12□□□□□ -1.43
CUX1-219ENST00000606749 J3QLW9 94 aa6.12□□□□□ -1.43
CUX1-219ENST00000606749 MGST3O14880 152 aa6.12□□□□□ -1.43
CUX1-219ENST00000606749 SLC16A6O15403 523 aa6.12□□□□□ -1.43
CUX1-219ENST00000606749 PLXNB1O43157 2135 aa6.12□□□□□ -1.43
CUX1-219ENST00000606749 OR2H2O95918 312 aa6.12□□□□□ -1.43
CUX1-219ENST00000606749 CYB5AP00167 134 aa6.12□□□□□ -1.43
CUX1-219ENST00000606749 IGKV1D-12P01611 117 aa6.12□□□□□ -1.43
CUX1-219ENST00000606749 MT-ND2P03891 347 aa6.12□□□□□ -1.43
CUX1-219ENST00000606749 ALPLP05186 524 aa6.12□□□□□ -1.43
CUX1-219ENST00000606749 ZNF19P17023 458 aa6.12□□□□□ -1.43
CUX1-219ENST00000606749 PRKACAP17612 351 aa6.12□□□□□ -1.43
CUX1-219ENST00000606749 AZGP1P25311 298 aaKnown RBP6.12□□□□□ -1.43
CUX1-219ENST00000606749 LMO1P25800 156 aa6.12□□□□□ -1.43
CUX1-219ENST00000606749 OR3A1P47881 315 aa6.12□□□□□ -1.43
CUX1-219ENST00000606749 POU3F4P49335 361 aa6.12□□□□□ -1.43
CUX1-219ENST00000606749 CCR9P51686 369 aa6.12□□□□□ -1.43
CUX1-219ENST00000606749 SNU13P55769 128 aaKnown RBP6.12□□□□□ -1.43
CUX1-219ENST00000606749 NANOS3P60323 173 aaKnown RBP6.12□□□□□ -1.43
CUX1-219ENST00000606749 SNRPGP62308 76 aaKnown RBP6.12□□□□□ -1.43
CUX1-219ENST00000606749 SLC34A1Q06495 639 aa6.12□□□□□ -1.43
CUX1-219ENST00000606749 NSUN5P1Q3KNT7 163 aa6.12□□□□□ -1.43
CUX1-219ENST00000606749 SPIN3Q5JUX0 258 aa6.12□□□□□ -1.43
CUX1-219ENST00000606749 KPRPQ5T749 579 aaPredicted RBP6.12□□□□□ -1.43
CUX1-219ENST00000606749 BAIAP2L2Q6UXY1 529 aa6.12□□□□□ -1.43
CUX1-219ENST00000606749 ZBTB49Q6ZSB9 765 aa6.12□□□□□ -1.43
CUX1-219ENST00000606749 LHFPL2Q6ZUX7 228 aa6.12□□□□□ -1.43
CUX1-219ENST00000606749 RNF144BQ7Z419 303 aa6.12□□□□□ -1.43
CUX1-219ENST00000606749 NDUFA11Q86Y39 141 aa6.12□□□□□ -1.43
CUX1-219ENST00000606749 ABHD12Q8N2K0 398 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms