RNA–Protein interactions for RNA: ENST00000600927.1

ZNF548-211, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-211ENST00000600927 CADM3Q8N126 398 aa9.8□□□□□ -0.84
ZNF548-211ENST00000600927 CHST4Q8NCG5 386 aa9.8□□□□□ -0.84
ZNF548-211ENST00000600927 OR56B4Q8NH76 319 aa9.8□□□□□ -0.84
ZNF548-211ENST00000600927 NPRL2Q8WTW4 380 aa9.8□□□□□ -0.84
ZNF548-211ENST00000600927 HPSE2Q8WWQ2 592 aa9.8□□□□□ -0.84
ZNF548-211ENST00000600927 FBXW5Q969U6 566 aa9.8□□□□□ -0.84
ZNF548-211ENST00000600927 RADILQ96JH8 1075 aa9.8□□□□□ -0.84
ZNF548-211ENST00000600927 GSX2Q9BZM3 304 aa9.8□□□□□ -0.84
ZNF548-211ENST00000600927 KCNK15Q9H427 330 aa9.8□□□□□ -0.84
ZNF548-211ENST00000600927 POFUT1Q9H488 388 aa9.8□□□□□ -0.84
ZNF548-211ENST00000600927 DLL4Q9NR61 685 aa9.8□□□□□ -0.84
ZNF548-211ENST00000600927 TMEM100Q9NV29 134 aa9.8□□□□□ -0.84
ZNF548-211ENST00000600927 NKIRAS2Q9NYR9 191 aa9.8□□□□□ -0.84
ZNF548-211ENST00000600927 GPR160Q9UJ42 338 aa9.8□□□□□ -0.84
ZNF548-211ENST00000600927 PURGQ9UJV8 347 aaKnown RBP9.8□□□□□ -0.84
ZNF548-211ENST00000600927 ROS1P08922 2347 aa9.8□□□□□ -0.84
ZNF548-211ENST00000600927 FLNAP21333 2647 aaKnown RBP9.79□□□□□ -0.84
ZNF548-211ENST00000600927 A0A0A6YYD4 124 aa9.79□□□□□ -0.84
ZNF548-211ENST00000600927 LRP5LA4QPB2 252 aa9.79□□□□□ -0.84
ZNF548-211ENST00000600927 INMT-MINDY4F8WBC2 141 aa9.79□□□□□ -0.84
ZNF548-211ENST00000600927 PRAF2O60831 178 aa9.79□□□□□ -0.84
ZNF548-211ENST00000600927 HTR3BO95264 441 aa9.79□□□□□ -0.84
ZNF548-211ENST00000600927 SERPINA2P20848 420 aa9.79□□□□□ -0.84
ZNF548-211ENST00000600927 BLVRBP30043 206 aaPredicted RBP9.79□□□□□ -0.84
ZNF548-211ENST00000600927 ZNF83P51522 516 aa9.79□□□□□ -0.84
ZNF548-211ENST00000600927 MECP2P51608 486 aaKnown RBP9.79□□□□□ -0.84
ZNF548-211ENST00000600927 GNG2P59768 71 aa9.79□□□□□ -0.84
ZNF548-211ENST00000600927 FGF12P61328 243 aa9.79□□□□□ -0.84
ZNF548-211ENST00000600927 SRSF7Q16629 238 aaKnown RBP eCLIP9.79□□□□□ -0.84
ZNF548-211ENST00000600927 MPV17LQ2QL34 196 aa9.79□□□□□ -0.84
ZNF548-211ENST00000600927 ACTBL2Q562R1 376 aa9.79□□□□□ -0.84
ZNF548-211ENST00000600927 PLAC9Q5JTB6 97 aa9.79□□□□□ -0.84
ZNF548-211ENST00000600927 RGS7BPQ6MZT1 257 aaPredicted RBP9.79□□□□□ -0.84
ZNF548-211ENST00000600927 STEAP1BQ6NZ63 245 aa9.79□□□□□ -0.84
ZNF548-211ENST00000600927 NUP37Q8NFH4 326 aa9.79□□□□□ -0.84
ZNF548-211ENST00000600927 OR13G1Q8NGZ3 307 aa9.79□□□□□ -0.84
ZNF548-211ENST00000600927 ST8SIA4Q92187 359 aa9.79□□□□□ -0.84
ZNF548-211ENST00000600927 MED30Q96HR3 178 aa9.79□□□□□ -0.84
ZNF548-211ENST00000600927 NKX3-1Q99801 234 aaPredicted RBP9.79□□□□□ -0.84
ZNF548-211ENST00000600927 SLC25A21Q9BQT8 299 aaPredicted RBP9.79□□□□□ -0.84
ZNF548-211ENST00000600927 PECRQ9BY49 303 aa9.79□□□□□ -0.84
ZNF548-211ENST00000600927 CHST6Q9GZX3 395 aa9.79□□□□□ -0.84
ZNF548-211ENST00000600927 OR51I2Q9H344 312 aa9.79□□□□□ -0.84
ZNF548-211ENST00000600927 BANF2Q9H503 90 aa9.79□□□□□ -0.84
ZNF548-211ENST00000600927 ELL3Q9HB65 397 aaPredicted RBP9.79□□□□□ -0.84
ZNF548-211ENST00000600927 MYEF2Q9P2K5 600 aaKnown RBP9.79□□□□□ -0.84
ZNF548-211ENST00000600927 POLDIP2Q9Y2S7 368 aa9.79□□□□□ -0.84
ZNF548-211ENST00000600927 CADP27708 2225 aa9.79□□□□□ -0.84
ZNF548-211ENST00000600927 hCG_2014768A0A024R1R8 64 aa9.78□□□□□ -0.84
ZNF548-211ENST00000600927 IGKV1-12A0A0C4DH73 117 aa9.78□□□□□ -0.84
ZNF548-211ENST00000600927 TMEM235A6NFC5 223 aa9.78□□□□□ -0.84
ZNF548-211ENST00000600927 ZNF736B4DX44 427 aaPredicted RBP9.78□□□□□ -0.84
ZNF548-211ENST00000600927 TRAPPC2LH3BP13 241 aa9.78□□□□□ -0.84
ZNF548-211ENST00000600927 J3QT63 122 aa9.78□□□□□ -0.84
ZNF548-211ENST00000600927 M0R1B8 84 aa9.78□□□□□ -0.84
ZNF548-211ENST00000600927 SOCS1O15524 211 aa9.78□□□□□ -0.84
ZNF548-211ENST00000600927 NOS1APO75052 506 aaPredicted RBP9.78□□□□□ -0.84
ZNF548-211ENST00000600927 IGKV1D-12P01611 117 aa9.78□□□□□ -0.84
ZNF548-211ENST00000600927 CD8AP01732 235 aa9.78□□□□□ -0.84
ZNF548-211ENST00000600927 IGHV3-13P01766 116 aa9.78□□□□□ -0.84
ZNF548-211ENST00000600927 DTYMKP23919 212 aa9.78□□□□□ -0.84
ZNF548-211ENST00000600927 HAAOP46952 286 aa9.78□□□□□ -0.84
ZNF548-211ENST00000600927 GPM6AP51674 278 aa9.78□□□□□ -0.84
ZNF548-211ENST00000600927 SELENOVP59797 346 aa9.78□□□□□ -0.84
ZNF548-211ENST00000600927 NKX6-1P78426 367 aaPredicted RBP9.78□□□□□ -0.84
ZNF548-211ENST00000600927 IL13RA2Q14627 380 aa9.78□□□□□ -0.84
ZNF548-211ENST00000600927 PRSS57Q6UWY2 283 aa9.78□□□□□ -0.84
ZNF548-211ENST00000600927 SLC25A26Q70HW3 274 aa9.78□□□□□ -0.84
ZNF548-211ENST00000600927 CELF2-AS1Q8N7Q2 184 aa9.78□□□□□ -0.84
ZNF548-211ENST00000600927 WFDC11Q8NEX6 87 aa9.78□□□□□ -0.84
ZNF548-211ENST00000600927 OR5D18Q8NGL1 313 aa9.78□□□□□ -0.84
ZNF548-211ENST00000600927 OR8S1Q8NH09 359 aa9.78□□□□□ -0.84
ZNF548-211ENST00000600927 GTF3AQ92664 365 aaKnown RBP9.78□□□□□ -0.84
ZNF548-211ENST00000600927 NICN1Q9BSH3 213 aa9.78□□□□□ -0.84
ZNF548-211ENST00000600927 TRAF4Q9BUZ4 470 aaPredicted RBP9.78□□□□□ -0.84
ZNF548-211ENST00000600927 ALX4Q9H161 411 aaPredicted RBP9.78□□□□□ -0.84
ZNF548-211ENST00000600927 IFT22Q9H7X7 185 aa9.78□□□□□ -0.84
ZNF548-211ENST00000600927 SEBOXQ9HB31 216 aaPredicted RBP9.78□□□□□ -0.84
ZNF548-211ENST00000600927 SPACA1Q9HBV2 294 aa9.78□□□□□ -0.84
ZNF548-211ENST00000600927 PLEKHJ1Q9NW61 149 aa9.78□□□□□ -0.84
ZNF548-211ENST00000600927 SLC2A8Q9NY64 477 aa9.78□□□□□ -0.84
ZNF548-211ENST00000600927 SCP2D1Q9UJQ7 156 aa9.78□□□□□ -0.84
ZNF548-211ENST00000600927 KCNK7Q9Y2U2 307 aa9.78□□□□□ -0.84
ZNF548-211ENST00000600927 IGLV3-9A0A075B6K5 115 aa9.77□□□□□ -0.85
ZNF548-211ENST00000600927 A0A1W2PP11 408 aa9.77□□□□□ -0.85
ZNF548-211ENST00000600927 HMX3A6NHT5 357 aa9.77□□□□□ -0.85
ZNF548-211ENST00000600927 VSTM5A8MXK1 200 aa9.77□□□□□ -0.85
ZNF548-211ENST00000600927 DISC1C4P0D8 188 aa9.77□□□□□ -0.85
ZNF548-211ENST00000600927 E7EQL1 145 aa9.77□□□□□ -0.85
ZNF548-211ENST00000600927 SPRY1O43609 319 aaPredicted RBP9.77□□□□□ -0.85
ZNF548-211ENST00000600927 SSX4O60224 188 aa9.77□□□□□ -0.85
ZNF548-211ENST00000600927 RAB3DO95716 219 aa9.77□□□□□ -0.85
ZNF548-211ENST00000600927 PTBP3O95758 552 aaKnown RBP9.77□□□□□ -0.85
ZNF548-211ENST00000600927 IL5P05113 134 aa9.77□□□□□ -0.85
ZNF548-211ENST00000600927 H2AFB2P0C5Z0 115 aa9.77□□□□□ -0.85
ZNF548-211ENST00000600927 GNB3P16520 340 aa9.77□□□□□ -0.85
ZNF548-211ENST00000600927 FUT3P21217 361 aa9.77□□□□□ -0.85
ZNF548-211ENST00000600927 CA6P23280 308 aa9.77□□□□□ -0.85
ZNF548-211ENST00000600927 GIFP27352 417 aa9.77□□□□□ -0.85
ZNF548-211ENST00000600927 CALCRP30988 508 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms