RNA–Protein interactions for RNA: ENST00000600453.1

IRF3-226, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-226ENST00000600453 SH2D1BO14796 132 aa12.76□□□□□ -0.37
IRF3-226ENST00000600453 ZNF737O75373 536 aa12.76□□□□□ -0.37
IRF3-226ENST00000600453 INMTO95050 263 aa12.76□□□□□ -0.37
IRF3-226ENST00000600453 HAND1O96004 215 aa12.76□□□□□ -0.37
IRF3-226ENST00000600453 IGHA1P01876 353 aa12.76□□□□□ -0.37
IRF3-226ENST00000600453 ZNF728P0DKX0 622 aa12.76□□□□□ -0.37
IRF3-226ENST00000600453 POU3F4P49335 361 aa12.76□□□□□ -0.37
IRF3-226ENST00000600453 DLX1P56177 255 aa12.76□□□□□ -0.37
IRF3-226ENST00000600453 EDDM3BP56851 147 aa12.76□□□□□ -0.37
IRF3-226ENST00000600453 PRB3Q04118 309 aaPredicted RBP12.76□□□□□ -0.37
IRF3-226ENST00000600453 PDZK1IP1Q13113 114 aa12.76□□□□□ -0.37
IRF3-226ENST00000600453 ZNF146Q15072 292 aa12.76□□□□□ -0.37
IRF3-226ENST00000600453 HCP5Q6MZN7 132 aa12.76□□□□□ -0.37
IRF3-226ENST00000600453 SAXO1Q8IYX7 474 aa12.76□□□□□ -0.37
IRF3-226ENST00000600453 C11orf42Q8N5U0 333 aa12.76□□□□□ -0.37
IRF3-226ENST00000600453 OR5AK2Q8NH90 309 aa12.76□□□□□ -0.37
IRF3-226ENST00000600453 LINC01006Q8NI28 216 aa12.76□□□□□ -0.37
IRF3-226ENST00000600453 TAF15Q92804 592 aaKnown RBP eCLIP12.76□□□□□ -0.372e-8■■□□□ 13.9
IRF3-226ENST00000600453 CPNE2Q96FN4 548 aaPredicted RBP12.76□□□□□ -0.37
IRF3-226ENST00000600453 SSX3Q99909 188 aa12.76□□□□□ -0.37
IRF3-226ENST00000600453 ZCCHC4Q9H5U6 513 aa12.76□□□□□ -0.37
IRF3-226ENST00000600453 AMBNQ9NP70 447 aa12.76□□□□□ -0.37
IRF3-226ENST00000600453 AASSQ9UDR5 926 aa12.76□□□□□ -0.37
IRF3-226ENST00000600453 MYRFQ9Y2G1 1151 aa12.76□□□□□ -0.37
IRF3-226ENST00000600453 F8VVB4 439 aa12.75□□□□□ -0.37
IRF3-226ENST00000600453 F8VWA3 439 aa12.75□□□□□ -0.37
IRF3-226ENST00000600453 H0YHG0 523 aa12.75□□□□□ -0.37
IRF3-226ENST00000600453 TIMM23O14925 209 aa12.75□□□□□ -0.37
IRF3-226ENST00000600453 TSPAN9O75954 239 aa12.75□□□□□ -0.37
IRF3-226ENST00000600453 GABRR1P24046 479 aa12.75□□□□□ -0.37
IRF3-226ENST00000600453 LRRC75BQ2VPJ9 315 aa12.75□□□□□ -0.37
IRF3-226ENST00000600453 PNKDQ8N490 385 aa12.75□□□□□ -0.37
IRF3-226ENST00000600453 WFDC12Q8WWY7 111 aa12.75□□□□□ -0.37
IRF3-226ENST00000600453 H3BUI4 141 aa12.74□□□□□ -0.37
IRF3-226ENST00000600453 MGST3O14880 152 aa12.74□□□□□ -0.37
IRF3-226ENST00000600453 MAGEB3O15480 346 aa12.74□□□□□ -0.37
IRF3-226ENST00000600453 CLPXO76031 633 aa12.74□□□□□ -0.37
IRF3-226ENST00000600453 PIPP12273 146 aaPredicted RBP12.74□□□□□ -0.37
IRF3-226ENST00000600453 CCL3L1P16619 93 aa12.74□□□□□ -0.37
IRF3-226ENST00000600453 PRKACAP17612 351 aa12.74□□□□□ -0.37
IRF3-226ENST00000600453 BCL3P20749 454 aa12.74□□□□□ -0.37
IRF3-226ENST00000600453 DCKP27707 260 aa12.74□□□□□ -0.37
IRF3-226ENST00000600453 ERP29P30040 261 aaKnown RBP12.74□□□□□ -0.37
IRF3-226ENST00000600453 MED21Q13503 144 aa12.74□□□□□ -0.37
IRF3-226ENST00000600453 ZNF273Q14593 569 aa12.74□□□□□ -0.37
IRF3-226ENST00000600453 GRK1Q15835 563 aa12.74□□□□□ -0.37
IRF3-226ENST00000600453 CCDC58Q4VC31 144 aa12.74□□□□□ -0.37
IRF3-226ENST00000600453 TTC23Q5W5X9 447 aa12.74□□□□□ -0.37
IRF3-226ENST00000600453 BRICD5Q6PL45 260 aa12.74□□□□□ -0.37
IRF3-226ENST00000600453 TMPRSS11AQ6ZMR5 421 aa12.74□□□□□ -0.37
IRF3-226ENST00000600453 LIAT1Q6ZQX7 453 aa12.74□□□□□ -0.37
IRF3-226ENST00000600453 Q6ZSV7 163 aa12.74□□□□□ -0.37
IRF3-226ENST00000600453 OR52I1Q8NGK6 324 aa12.74□□□□□ -0.37
IRF3-226ENST00000600453 MALSU1Q96EH3 234 aa12.74□□□□□ -0.37
IRF3-226ENST00000600453 ZNF714Q96N38 554 aa12.74□□□□□ -0.37
IRF3-226ENST00000600453 JAM3Q9BX67 310 aa12.74□□□□□ -0.37
IRF3-226ENST00000600453 ISG20L2Q9H9L3 353 aaKnown RBP12.74□□□□□ -0.37
IRF3-226ENST00000600453 HMG20AQ9NP66 347 aa12.74□□□□□ -0.37
IRF3-226ENST00000600453 FGF20Q9NP95 211 aaPredicted RBP12.74□□□□□ -0.37
IRF3-226ENST00000600453 DHDHQ9UQ10 334 aa12.74□□□□□ -0.37
IRF3-226ENST00000600453 TBL2Q9Y4P3 447 aaKnown RBP12.74□□□□□ -0.37
IRF3-226ENST00000600453 LINC00312Q9Y6C7 94 aa12.74□□□□□ -0.37
IRF3-226ENST00000600453 TMEM82A0PJX8 343 aa12.73□□□□□ -0.37
IRF3-226ENST00000600453 H3BUX3 64 aa12.73□□□□□ -0.37
IRF3-226ENST00000600453 KDM4BO94953 1096 aa12.73□□□□□ -0.37
IRF3-226ENST00000600453 ZFPL1O95159 310 aa12.73□□□□□ -0.37
IRF3-226ENST00000600453 NPBWR2P48146 333 aa12.73□□□□□ -0.37
IRF3-226ENST00000600453 BMXP51813 675 aa12.73□□□□□ -0.37
IRF3-226ENST00000600453 DLX6P56179 175 aa12.73□□□□□ -0.37
IRF3-226ENST00000600453 C11orf88Q6PI97 169 aa12.73□□□□□ -0.37
IRF3-226ENST00000600453 TREML4Q6UXN2 200 aa12.73□□□□□ -0.37
IRF3-226ENST00000600453 PARP16Q8N5Y8 322 aa12.73□□□□□ -0.37
IRF3-226ENST00000600453 PACRGLQ8N7B6 248 aa12.73□□□□□ -0.37
IRF3-226ENST00000600453 SETD9Q8NE22 299 aa12.73□□□□□ -0.37
IRF3-226ENST00000600453 OR51A4Q8NGJ6 313 aa12.73□□□□□ -0.37
IRF3-226ENST00000600453 OR13C9Q8NGT0 318 aa12.73□□□□□ -0.37
IRF3-226ENST00000600453 CITED1Q99966 193 aa12.73□□□□□ -0.37
IRF3-226ENST00000600453 CDCA4Q9BXL8 241 aa12.73□□□□□ -0.37
IRF3-226ENST00000600453 EXOSC4Q9NPD3 245 aaKnown RBP12.73□□□□□ -0.37
IRF3-226ENST00000600453 RBFOX1Q9NWB1 397 aaKnown RBP12.73□□□□□ -0.37
IRF3-226ENST00000600453 FBLN5Q9UBX5 448 aa12.73□□□□□ -0.37
IRF3-226ENST00000600453 DSCAML1Q8TD84 2053 aa12.73□□□□□ -0.37
IRF3-226ENST00000600453 M0QZ24 198 aa12.72□□□□□ -0.37
IRF3-226ENST00000600453 SULT1B1O43704 296 aa12.72□□□□□ -0.37
IRF3-226ENST00000600453 ARG1P05089 322 aa12.72□□□□□ -0.37
IRF3-226ENST00000600453 CD2P06729 351 aa12.72□□□□□ -0.37
IRF3-226ENST00000600453 HCKP08631 526 aa12.72□□□□□ -0.37
IRF3-226ENST00000600453 IGHV1-8P0DP01 117 aa12.72□□□□□ -0.37
IRF3-226ENST00000600453 COX7A1P24310 79 aa12.72□□□□□ -0.37
IRF3-226ENST00000600453 LMO1P25800 156 aa12.72□□□□□ -0.37
IRF3-226ENST00000600453 EDDM3AQ14507 147 aa12.72□□□□□ -0.37
IRF3-226ENST00000600453 RPL22L1Q6P5R6 122 aaKnown RBP12.72□□□□□ -0.37
IRF3-226ENST00000600453 ZNF782Q6ZMW2 699 aaPredicted RBP12.72□□□□□ -0.37
IRF3-226ENST00000600453 CHST4Q8NCG5 386 aa12.72□□□□□ -0.37
IRF3-226ENST00000600453 OR11H6Q8NGC7 330 aa12.72□□□□□ -0.37
IRF3-226ENST00000600453 OR52N4Q8NGI2 321 aa12.72□□□□□ -0.37
IRF3-226ENST00000600453 OR10AC1Q8NH08 325 aa12.72□□□□□ -0.37
IRF3-226ENST00000600453 TSEN15Q8WW01 171 aaKnown RBP12.72□□□□□ -0.37
IRF3-226ENST00000600453 FOXRED1Q96CU9 486 aaPredicted RBP12.72□□□□□ -0.37
IRF3-226ENST00000600453 ZNF649Q9BS31 505 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms