RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 HOXB1P14653 301 aaPredicted RBP14.57□□□□□ -0.08
SHKBP1-216ENST00000598201 AKR1C4P17516 323 aa14.57□□□□□ -0.08
SHKBP1-216ENST00000598201 MRPL49Q13405 166 aaKnown RBP14.57□□□□□ -0.08
SHKBP1-216ENST00000598201 ALKBH6Q3KRA9 238 aa14.57□□□□□ -0.08
SHKBP1-216ENST00000598201 LY6G6FQ5SQ64 297 aa14.57□□□□□ -0.08
SHKBP1-216ENST00000598201 C3P1Q6ZMU1 363 aa14.57□□□□□ -0.08
SHKBP1-216ENST00000598201 LYG2Q86SG7 212 aa14.57□□□□□ -0.08
SHKBP1-216ENST00000598201 SAXO1Q8IYX7 474 aa14.57□□□□□ -0.08
SHKBP1-216ENST00000598201 SLC7A5P1Q8MH63 180 aa14.57□□□□□ -0.08
SHKBP1-216ENST00000598201 PPA2Q9H2U2 334 aa14.57□□□□□ -0.08
SHKBP1-216ENST00000598201 C5orf66Q9H5L9 145 aa14.57□□□□□ -0.08
SHKBP1-216ENST00000598201 GPR132Q9UNW8 380 aa14.57□□□□□ -0.08
SHKBP1-216ENST00000598201 C3orf80F5H4A9 247 aa14.57□□□□□ -0.08
SHKBP1-216ENST00000598201 J3QW42 95 aa14.57□□□□□ -0.08
SHKBP1-216ENST00000598201 OR7C1O76099 320 aaPredicted RBP14.57□□□□□ -0.08
SHKBP1-216ENST00000598201 CRYABP02511 175 aaKnown RBP14.57□□□□□ -0.08
SHKBP1-216ENST00000598201 FCGR3AP08637 254 aa14.57□□□□□ -0.08
SHKBP1-216ENST00000598201 PI3P19957 117 aa14.57□□□□□ -0.08
SHKBP1-216ENST00000598201 BAMBIQ13145 260 aa14.57□□□□□ -0.08
SHKBP1-216ENST00000598201 ELP2Q6IA86 826 aa14.57□□□□□ -0.08
SHKBP1-216ENST00000598201 HAGHLQ6PII5 290 aaPredicted RBP14.57□□□□□ -0.08
SHKBP1-216ENST00000598201 Q6ZPA2 131 aa14.57□□□□□ -0.08
SHKBP1-216ENST00000598201 TMEM200AQ86VY9 491 aa14.57□□□□□ -0.08
SHKBP1-216ENST00000598201 SLC25A40Q8TBP6 338 aa14.57□□□□□ -0.08
SHKBP1-216ENST00000598201 OR5H14A6NHG9 310 aa14.56□□□□□ -0.08
SHKBP1-216ENST00000598201 F5H5P2 479 aa14.56□□□□□ -0.08
SHKBP1-216ENST00000598201 CD34P28906 385 aa14.56□□□□□ -0.08
SHKBP1-216ENST00000598201 HOXC12P31275 282 aa14.56□□□□□ -0.08
SHKBP1-216ENST00000598201 UCP2P55851 309 aa14.56□□□□□ -0.08
SHKBP1-216ENST00000598201 LIN54Q6MZP7 749 aa14.56□□□□□ -0.08
SHKBP1-216ENST00000598201 C11orf88Q6PI97 169 aa14.56□□□□□ -0.08
SHKBP1-216ENST00000598201 Q8NA96 180 aa14.56□□□□□ -0.08
SHKBP1-216ENST00000598201 TMEM230Q96A57 120 aa14.56□□□□□ -0.08
SHKBP1-216ENST00000598201 ZNF488Q96MN9 340 aa14.56□□□□□ -0.08
SHKBP1-216ENST00000598201 SLC23A1Q9UHI7 598 aa14.56□□□□□ -0.08
SHKBP1-216ENST00000598201 ANXA10Q9UJ72 324 aa14.56□□□□□ -0.08
SHKBP1-216ENST00000598201 NOP16Q9Y3C1 178 aaKnown RBP14.56□□□□□ -0.08
SHKBP1-216ENST00000598201 IGSF10Q6WRI0 2623 aa14.56□□□□□ -0.08
SHKBP1-216ENST00000598201 TSC22D2O75157 780 aa14.56□□□□□ -0.08
SHKBP1-216ENST00000598201 FUT3P21217 361 aa14.56□□□□□ -0.08
SHKBP1-216ENST00000598201 SSTR2P30874 369 aa14.56□□□□□ -0.08
SHKBP1-216ENST00000598201 FGF12P61328 243 aa14.56□□□□□ -0.08
SHKBP1-216ENST00000598201 GNG3P63215 75 aa14.56□□□□□ -0.08
SHKBP1-216ENST00000598201 IL13RA1P78552 427 aa14.56□□□□□ -0.08
SHKBP1-216ENST00000598201 MPPED2Q15777 294 aa14.56□□□□□ -0.08
SHKBP1-216ENST00000598201 FAM209AQ5JX71 171 aa14.56□□□□□ -0.08
SHKBP1-216ENST00000598201 FAHD2BQ6P2I3 314 aaPredicted RBP14.56□□□□□ -0.08
SHKBP1-216ENST00000598201 PEG10Q86TG7 708 aaKnown RBP14.56□□□□□ -0.08
SHKBP1-216ENST00000598201 OR1J1Q8NGS3 322 aa14.56□□□□□ -0.08
SHKBP1-216ENST00000598201 FAHD2AQ96GK7 314 aa14.56□□□□□ -0.08
SHKBP1-216ENST00000598201 OR5B21A6NL26 309 aa14.55□□□□□ -0.08
SHKBP1-216ENST00000598201 VAMP1P23763 118 aa14.55□□□□□ -0.08
SHKBP1-216ENST00000598201 DTYMKP23919 212 aa14.55□□□□□ -0.08
SHKBP1-216ENST00000598201 C1orf185Q5T7R7 199 aa14.55□□□□□ -0.08
SHKBP1-216ENST00000598201 TMEM17Q86X19 198 aa14.55□□□□□ -0.08
SHKBP1-216ENST00000598201 MKXQ8IYA7 352 aa14.55□□□□□ -0.08
SHKBP1-216ENST00000598201 RTBDNQ9BSG5 229 aaPredicted RBP14.55□□□□□ -0.08
SHKBP1-216ENST00000598201 PRELID1Q9Y255 219 aa14.55□□□□□ -0.08
SHKBP1-216ENST00000598201 TRAPPC2LH3BP13 241 aa14.54□□□□□ -0.08
SHKBP1-216ENST00000598201 FPR2P25090 351 aa14.54□□□□□ -0.08
SHKBP1-216ENST00000598201 MPV17P39210 176 aa14.54□□□□□ -0.08
SHKBP1-216ENST00000598201 WDR86Q86TI4 376 aa14.54□□□□□ -0.08
SHKBP1-216ENST00000598201 CASTOR1Q8WTX7 329 aa14.54□□□□□ -0.08
SHKBP1-216ENST00000598201 MITD1Q8WV92 249 aa14.54□□□□□ -0.08
SHKBP1-216ENST00000598201 BBC3Q96PG8 261 aaPredicted RBP14.54□□□□□ -0.08
SHKBP1-216ENST00000598201 OR51I2Q9H344 312 aa14.54□□□□□ -0.08
SHKBP1-216ENST00000598201 LIME1Q9H400 295 aa14.54□□□□□ -0.08
SHKBP1-216ENST00000598201 ZNF442Q9H7R0 627 aa14.54□□□□□ -0.08
SHKBP1-216ENST00000598201 EDARQ9UNE0 448 aa14.54□□□□□ -0.08
SHKBP1-216ENST00000598201 PLSCR5A0PG75 271 aa14.54□□□□□ -0.08
SHKBP1-216ENST00000598201 ANKRD34BA5PLL1 514 aa14.54□□□□□ -0.08
SHKBP1-216ENST00000598201 CCSO14618 274 aa14.54□□□□□ -0.08
SHKBP1-216ENST00000598201 RHBDL1O75783 438 aa14.54□□□□□ -0.08
SHKBP1-216ENST00000598201 CECR9P0C854 216 aa14.54□□□□□ -0.08
SHKBP1-216ENST00000598201 DUSP1P28562 367 aa14.54□□□□□ -0.08
SHKBP1-216ENST00000598201 ZNF81P51508 661 aa14.54□□□□□ -0.08
SHKBP1-216ENST00000598201 DHODHQ02127 395 aa14.54□□□□□ -0.08
SHKBP1-216ENST00000598201 PSG7Q13046 419 aa14.54□□□□□ -0.08
SHKBP1-216ENST00000598201 P2RY6Q15077 328 aa14.54□□□□□ -0.08
SHKBP1-216ENST00000598201 NHLRC3Q5JS37 347 aa14.54□□□□□ -0.08
SHKBP1-216ENST00000598201 ZNF324BQ6AW86 544 aaPredicted RBP14.54□□□□□ -0.08
SHKBP1-216ENST00000598201 FAM180AQ6UWF9 173 aa14.54□□□□□ -0.08
SHKBP1-216ENST00000598201 BHLHA15Q7RTS1 189 aaPredicted RBP14.54□□□□□ -0.08
SHKBP1-216ENST00000598201 ZNF573Q86YE8 665 aa14.54□□□□□ -0.08
SHKBP1-216ENST00000598201 TMEM185AQ8NFB2 350 aa14.54□□□□□ -0.08
SHKBP1-216ENST00000598201 MARS2Q96GW9 593 aaKnown RBP14.54□□□□□ -0.08
SHKBP1-216ENST00000598201 HEXA-AS1Q9H8Q6 139 aa14.54□□□□□ -0.08
SHKBP1-216ENST00000598201 ESPL1Q14674 2120 aa14.54□□□□□ -0.08
SHKBP1-216ENST00000598201 ZNF205O95201 554 aa14.53□□□□□ -0.08
SHKBP1-216ENST00000598201 RAC2P15153 192 aa14.53□□□□□ -0.08
SHKBP1-216ENST00000598201 GLRA1P23415 457 aa14.53□□□□□ -0.08
SHKBP1-216ENST00000598201 PTGER4P35408 488 aa14.53□□□□□ -0.08
SHKBP1-216ENST00000598201 GRK1Q15835 563 aa14.53□□□□□ -0.08
SHKBP1-216ENST00000598201 ZNF660Q6AZW8 331 aaPredicted RBP14.53□□□□□ -0.08
SHKBP1-216ENST00000598201 ZNF474Q6S9Z5 364 aaPredicted RBP14.53□□□□□ -0.08
SHKBP1-216ENST00000598201 OR5M8Q8NGP6 311 aa14.53□□□□□ -0.08
SHKBP1-216ENST00000598201 KLF14Q8TD94 323 aaPredicted RBP14.53□□□□□ -0.08
SHKBP1-216ENST00000598201 POM121Q96HA1 1249 aa14.53□□□□□ -0.08
SHKBP1-216ENST00000598201 SPTA1P02549 2419 aa14.53□□□□□ -0.08
SHKBP1-216ENST00000598201 FAM90A10PA6NDY2 464 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms