RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 MGST3O14880 152 aa7.91□□□□□ -1.14
LIG1-209ENST00000596104 PRKACGP22612 351 aa7.91□□□□□ -1.14
LIG1-209ENST00000596104 GABRR1P24046 479 aa7.91□□□□□ -1.14
LIG1-209ENST00000596104 PEX2P28328 305 aa7.91□□□□□ -1.14
LIG1-209ENST00000596104 DUSP1P28562 367 aa7.91□□□□□ -1.14
LIG1-209ENST00000596104 CD34P28906 385 aa7.91□□□□□ -1.14
LIG1-209ENST00000596104 ERP29P30040 261 aaKnown RBP7.91□□□□□ -1.14
LIG1-209ENST00000596104 OR3A1P47881 315 aa7.91□□□□□ -1.14
LIG1-209ENST00000596104 P2RX3P56373 397 aa7.91□□□□□ -1.14
LIG1-209ENST00000596104 CXCR4P61073 352 aa7.91□□□□□ -1.14
LIG1-209ENST00000596104 SNAPC1Q16533 368 aa7.91□□□□□ -1.14
LIG1-209ENST00000596104 PRAMEF5Q5TYX0 476 aa7.91□□□□□ -1.14
LIG1-209ENST00000596104 SLX4IPQ5VYV7 408 aa7.91□□□□□ -1.14
LIG1-209ENST00000596104 SLC25A26Q70HW3 274 aa7.91□□□□□ -1.14
LIG1-209ENST00000596104 RNF144BQ7Z419 303 aa7.91□□□□□ -1.14
LIG1-209ENST00000596104 RTN4RL2Q86UN3 420 aa7.91□□□□□ -1.14
LIG1-209ENST00000596104 EGFL6Q8IUX8 553 aa7.91□□□□□ -1.14
LIG1-209ENST00000596104 ZNF596Q8TC21 504 aa7.91□□□□□ -1.14
LIG1-209ENST00000596104 EMG1Q92979 244 aaKnown RBP7.91□□□□□ -1.14
LIG1-209ENST00000596104 CNN2Q99439 309 aaKnown RBP7.91□□□□□ -1.14
LIG1-209ENST00000596104 TVP23BQ9NYZ1 205 aa7.91□□□□□ -1.14
LIG1-209ENST00000596104 SLC7A11Q9UPY5 501 aa7.91□□□□□ -1.14
LIG1-209ENST00000596104 UBE2J1Q9Y385 318 aaPredicted RBP7.91□□□□□ -1.14
LIG1-209ENST00000596104 SNX5Q9Y5X3 404 aa7.91□□□□□ -1.14
LIG1-209ENST00000596104 TRBV2A0A0J9YWF9 115 aa7.9□□□□□ -1.14
LIG1-209ENST00000596104 PSMB11A5LHX3 300 aa7.9□□□□□ -1.14
LIG1-209ENST00000596104 LEUTXA8MZ59 168 aa7.9□□□□□ -1.14
LIG1-209ENST00000596104 B2RBV5 119 aa7.9□□□□□ -1.14
LIG1-209ENST00000596104 LY6LH3BQJ8 138 aa7.9□□□□□ -1.14
LIG1-209ENST00000596104 M0QZK8 103 aa7.9□□□□□ -1.14
LIG1-209ENST00000596104 PRKYO43930 277 aa7.9□□□□□ -1.14
LIG1-209ENST00000596104 ENTPD6O75354 484 aa7.9□□□□□ -1.14
LIG1-209ENST00000596104 INMTO95050 263 aa7.9□□□□□ -1.14
LIG1-209ENST00000596104 CCDC159P0C7I6 412 aa7.9□□□□□ -1.14
LIG1-209ENST00000596104 ANXA8P13928 327 aa7.9□□□□□ -1.14
LIG1-209ENST00000596104 CDK2P24941 298 aa7.9□□□□□ -1.14
LIG1-209ENST00000596104 GDNFP39905 211 aa7.9□□□□□ -1.14
LIG1-209ENST00000596104 NPBWR2P48146 333 aa7.9□□□□□ -1.14
LIG1-209ENST00000596104 MNAT1P51948 309 aa7.9□□□□□ -1.14
LIG1-209ENST00000596104 FUT6P51993 359 aa7.9□□□□□ -1.14
LIG1-209ENST00000596104 RPL23AP62750 156 aaKnown RBP7.9□□□□□ -1.14
LIG1-209ENST00000596104 DCTN2Q13561 401 aaKnown RBP7.9□□□□□ -1.14
LIG1-209ENST00000596104 ZNF146Q15072 292 aa7.9□□□□□ -1.14
LIG1-209ENST00000596104 TPTE2P1Q5T6R2 138 aa7.9□□□□□ -1.14
LIG1-209ENST00000596104 OR52W1Q6IF63 320 aa7.9□□□□□ -1.14
LIG1-209ENST00000596104 HEPN1Q6WQI6 88 aa7.9□□□□□ -1.14
LIG1-209ENST00000596104 C18orf65Q6ZTR6 163 aa7.9□□□□□ -1.14
LIG1-209ENST00000596104 OR2W3Q7Z3T1 314 aa7.9□□□□□ -1.14
LIG1-209ENST00000596104 BCDIN3DQ7Z5W3 292 aaKnown RBP7.9□□□□□ -1.14
LIG1-209ENST00000596104 PIGWQ7Z7B1 504 aa7.9□□□□□ -1.14
LIG1-209ENST00000596104 ZNF329Q86UD4 541 aa7.9□□□□□ -1.14
LIG1-209ENST00000596104 SLC35F2Q8IXU6 374 aa7.9□□□□□ -1.14
LIG1-209ENST00000596104 OR51D1Q8NGF3 324 aa7.9□□□□□ -1.14
LIG1-209ENST00000596104 CORO2AQ92828 525 aa7.9□□□□□ -1.14
LIG1-209ENST00000596104 STMN2Q93045 179 aa7.9□□□□□ -1.14
LIG1-209ENST00000596104 ASB9Q96DX5 294 aa7.9□□□□□ -1.14
LIG1-209ENST00000596104 P2RX4Q99571 388 aa7.9□□□□□ -1.14
LIG1-209ENST00000596104 MNTQ99583 582 aa7.9□□□□□ -1.14
LIG1-209ENST00000596104 MCRIP2Q9BUT9 160 aaKnown RBP7.9□□□□□ -1.14
LIG1-209ENST00000596104 TEX12Q9BXU0 123 aa7.9□□□□□ -1.14
LIG1-209ENST00000596104 CHST5Q9GZS9 411 aa7.9□□□□□ -1.14
LIG1-209ENST00000596104 ZNF556Q9HAH1 456 aa7.9□□□□□ -1.14
LIG1-209ENST00000596104 ZNF286AQ9HBT8 521 aa7.9□□□□□ -1.14
LIG1-209ENST00000596104 ADGRL4Q9HBW9 690 aa7.9□□□□□ -1.14
LIG1-209ENST00000596104 RBFOX1Q9NWB1 397 aaKnown RBP7.9□□□□□ -1.14
LIG1-209ENST00000596104 ARL2BPQ9Y2Y0 163 aa7.9□□□□□ -1.14
LIG1-209ENST00000596104 FAM172BPA6NC97 362 aa7.89□□□□□ -1.15
LIG1-209ENST00000596104 FAM90A18PA6NE21 464 aa7.89□□□□□ -1.15
LIG1-209ENST00000596104 FAM90A16PA6NEW6 464 aa7.89□□□□□ -1.15
LIG1-209ENST00000596104 FAM90A20PA6NIJ5 464 aa7.89□□□□□ -1.15
LIG1-209ENST00000596104 FAM90A9PA6NNJ1 464 aa7.89□□□□□ -1.15
LIG1-209ENST00000596104 FAM90A12PA8MX19 464 aa7.89□□□□□ -1.15
LIG1-209ENST00000596104 FAM90A5PA8MXJ8 464 aa7.89□□□□□ -1.15
LIG1-209ENST00000596104 H0YHG0 523 aa7.89□□□□□ -1.15
LIG1-209ENST00000596104 BUB1B-PAK6H3BSN5 160 aa7.89□□□□□ -1.15
LIG1-209ENST00000596104 GNGT2O14610 69 aa7.89□□□□□ -1.15
LIG1-209ENST00000596104 GATBO75879 557 aaKnown RBP7.89□□□□□ -1.15
LIG1-209ENST00000596104 DCTN3O75935 186 aa7.89□□□□□ -1.15
LIG1-209ENST00000596104 FAM90A15PP0C7V4 464 aa7.89□□□□□ -1.15
LIG1-209ENST00000596104 FAM90A13PP0C7W8 464 aa7.89□□□□□ -1.15
LIG1-209ENST00000596104 FAM90A14PP0C7W9 464 aa7.89□□□□□ -1.15
LIG1-209ENST00000596104 FAM90A24PP0C7X0 464 aa7.89□□□□□ -1.15
LIG1-209ENST00000596104 NHLRC4P0CG21 123 aaPredicted RBP7.89□□□□□ -1.15
LIG1-209ENST00000596104 ARHGDIBP52566 201 aa7.89□□□□□ -1.15
LIG1-209ENST00000596104 CRISP1P54107 249 aa7.89□□□□□ -1.15
LIG1-209ENST00000596104 ACTR3P61158 418 aa7.89□□□□□ -1.15
LIG1-209ENST00000596104 EFNB1P98172 346 aa7.89□□□□□ -1.15
LIG1-209ENST00000596104 HLA-DRB5Q30154 266 aa7.89□□□□□ -1.15
LIG1-209ENST00000596104 NKAPLQ5M9Q1 402 aa7.89□□□□□ -1.15
LIG1-209ENST00000596104 UTF1Q5T230 341 aa7.89□□□□□ -1.15
LIG1-209ENST00000596104 AADACL4Q5VUY2 407 aa7.89□□□□□ -1.15
LIG1-209ENST00000596104 C8orf86Q6ZUL3 223 aa7.89□□□□□ -1.15
LIG1-209ENST00000596104 MEPCEQ7L2J0 689 aaKnown RBP7.89□□□□□ -1.15
LIG1-209ENST00000596104 SSX6Q7RTT6 188 aa7.89□□□□□ -1.15
LIG1-209ENST00000596104 TRAPPC6BQ86SZ2 158 aa7.89□□□□□ -1.15
LIG1-209ENST00000596104 CATSPERDQ86XM0 798 aa7.89□□□□□ -1.15
LIG1-209ENST00000596104 Q8IYB0 196 aa7.89□□□□□ -1.15
LIG1-209ENST00000596104 ENTHD1Q8IYW4 607 aa7.89□□□□□ -1.15
LIG1-209ENST00000596104 CANT1Q8WVQ1 401 aa7.89□□□□□ -1.15
LIG1-209ENST00000596104 CCDC124Q96CT7 223 aaKnown RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms