RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 INMTO95050 263 aa21.32■■□□□ 1
TRIM28-204ENST00000594806 NDUFB7P17568 137 aa21.32■■□□□ 1
TRIM28-204ENST00000594806 MTNR1BP49286 362 aa21.32■■□□□ 1
TRIM28-204ENST00000594806 ELP2Q6IA86 826 aa21.32■■□□□ 1
TRIM28-204ENST00000594806 ASCL4Q6XD76 172 aa21.32■■□□□ 1
TRIM28-204ENST00000594806 RNF144BQ7Z419 303 aa21.32■■□□□ 1
TRIM28-204ENST00000594806 NKAIN3Q8N8D7 197 aa21.32■■□□□ 1
TRIM28-204ENST00000594806 TNFAIP8L1Q8WVP5 186 aa21.32■■□□□ 1
TRIM28-204ENST00000594806 FCGR1BQ92637 280 aa21.32■■□□□ 1
TRIM28-204ENST00000594806 CNTD2Q9H8S5 307 aa21.32■■□□□ 1
TRIM28-204ENST00000594806 TRAV8-7A0A075B6U6 113 aa21.31■■□□□ 1
TRIM28-204ENST00000594806 A0A1W2PPK0 400 aa21.31■■□□□ 1
TRIM28-204ENST00000594806 PIN1P1O15428 100 aa21.31■■□□□ 1
TRIM28-204ENST00000594806 SELLP14151 372 aa21.31■■□□□ 1
TRIM28-204ENST00000594806 PRKACAP17612 351 aa21.31■■□□□ 1
TRIM28-204ENST00000594806 PTGFRP43088 359 aa21.31■■□□□ 1
TRIM28-204ENST00000594806 CAPZA1P52907 286 aa21.31■■□□□ 1
TRIM28-204ENST00000594806 KCTD21Q4G0X4 260 aa21.31■■□□□ 1
TRIM28-204ENST00000594806 PHC2Q8IXK0 858 aa21.31■■□□□ 1
TRIM28-204ENST00000594806 SPARTQ8N0X7 666 aa21.31■■□□□ 1
TRIM28-204ENST00000594806 UPRTQ96BW1 309 aa21.31■■□□□ 1
TRIM28-204ENST00000594806 ORAI1Q96D31 301 aa21.31■■□□□ 1
TRIM28-204ENST00000594806 PCDHB16Q9NRJ7 776 aa21.31■■□□□ 1
TRIM28-204ENST00000594806 METRNQ9UJH8 293 aa21.31■■□□□ 1
TRIM28-204ENST00000594806 K7N7A8 449 aa21.3■■□□□ 1
TRIM28-204ENST00000594806 FSHBP01225 129 aa21.3■■□□□ 1
TRIM28-204ENST00000594806 TFF1P04155 84 aa21.3■■□□□ 1
TRIM28-204ENST00000594806 SFTPBP07988 381 aa21.3■■□□□ 1
TRIM28-204ENST00000594806 Q8NFD4 153 aa21.3■■□□□ 1
TRIM28-204ENST00000594806 OR5D13Q8NGL4 314 aa21.3■■□□□ 1
TRIM28-204ENST00000594806 TBC1D15Q8TC07 691 aa21.3■■□□□ 1
TRIM28-204ENST00000594806 H1FXQ92522 213 aaKnown RBP21.3■■□□□ 1
TRIM28-204ENST00000594806 SNX22Q96L94 193 aa21.3■■□□□ 1
TRIM28-204ENST00000594806 S100A13Q99584 98 aa21.3■■□□□ 1
TRIM28-204ENST00000594806 TCF7L1Q9HCS4 588 aa21.3■■□□□ 1
TRIM28-204ENST00000594806 IL36GQ9NZH8 169 aa21.3■■□□□ 1
TRIM28-204ENST00000594806 KPTNQ9Y664 436 aa21.3■■□□□ 1
TRIM28-204ENST00000594806 SH2D1BO14796 132 aa21.29■■□□□ 1
TRIM28-204ENST00000594806 HAND1O96004 215 aa21.29■■□□□ 1
TRIM28-204ENST00000594806 TK1P04183 234 aa21.29■■□□□ 1
TRIM28-204ENST00000594806 GABRA5P31644 462 aa21.29■■□□□ 1
TRIM28-204ENST00000594806 FGF12P61328 243 aa21.29■■□□□ 1
TRIM28-204ENST00000594806 COL10A1Q03692 680 aa21.29■■□□□ 1
TRIM28-204ENST00000594806 RSU1Q15404 277 aa21.29■■□□□ 1
TRIM28-204ENST00000594806 ARMCX4Q5H9R4 360 aa21.29■■□□□ 1
TRIM28-204ENST00000594806 UBE2UQ5VVX9 321 aa21.29■■□□□ 1
TRIM28-204ENST00000594806 ZNF773Q6PK81 442 aa21.29■■□□□ 1
TRIM28-204ENST00000594806 CEACAM19Q7Z692 300 aa21.29■■□□□ 1
TRIM28-204ENST00000594806 FGFRL1Q8N441 504 aa21.29■■□□□ 1
TRIM28-204ENST00000594806 KIR3DL3Q8N743 410 aa21.29■■□□□ 1
TRIM28-204ENST00000594806 PPP1R35Q8TAP8 253 aa21.29■■□□□ 1
TRIM28-204ENST00000594806 FAM192AQ9GZU8 254 aa21.29■■□□□ 1
TRIM28-204ENST00000594806 SF3B6Q9Y3B4 125 aaKnown RBP21.29■■□□□ 1
TRIM28-204ENST00000594806 NF1P21359 2839 aa21.29■■□□□ 1
TRIM28-204ENST00000594806 JMJD1CQ15652 2540 aa21.28■■□□□ 1
TRIM28-204ENST00000594806 ZNF780AO75290 641 aaPredicted RBP21.28■■□□□ 1
TRIM28-204ENST00000594806 ZNF737O75373 536 aa21.28■■□□□ 1
TRIM28-204ENST00000594806 MAS1P04201 325 aa21.28■■□□□ 1
TRIM28-204ENST00000594806 UCHL1P09936 223 aa21.28■■□□□ 1
TRIM28-204ENST00000594806 CEBPDP49716 269 aaPredicted RBP21.28■■□□□ 1
TRIM28-204ENST00000594806 HSD17B12Q53GQ0 312 aa21.28■■□□□ 1
TRIM28-204ENST00000594806 METTL11BQ5VVY1 283 aa21.28■■□□□ 1
TRIM28-204ENST00000594806 CMTM4Q8IZR5 234 aa21.28■■□□□ 1
TRIM28-204ENST00000594806 ASCC1Q8N9N2 400 aaKnown RBP21.28■■□□□ 1
TRIM28-204ENST00000594806 FOXRED1Q96CU9 486 aaPredicted RBP21.28■■□□□ 1
TRIM28-204ENST00000594806 METTL9Q9H1A3 318 aa21.28■■□□□ 1
TRIM28-204ENST00000594806 EXOSC4Q9NPD3 245 aaKnown RBP21.28■■□□□ 1
TRIM28-204ENST00000594806 ARL6IP5O75915 188 aa21.27■■□□□ 1
TRIM28-204ENST00000594806 ADRA2CP18825 462 aa21.27■■□□□ 1
TRIM28-204ENST00000594806 SRMP19623 302 aa21.27■■□□□ 1
TRIM28-204ENST00000594806 LMO1P25800 156 aa21.27■■□□□ 1
TRIM28-204ENST00000594806 GPR176Q14439 515 aa21.27■■□□□ 1
TRIM28-204ENST00000594806 C1orf122Q6ZSJ8 110 aa21.27■■□□□ 1
TRIM28-204ENST00000594806 CHST4Q8NCG5 386 aa21.27■■□□□ 1
TRIM28-204ENST00000594806 TMEM203Q969S6 136 aa21.27■■□□□ 1
TRIM28-204ENST00000594806 WDFY2Q96P53 400 aa21.27■■□□□ 1
TRIM28-204ENST00000594806 UQCC2Q9BRT2 126 aa21.27■■□□□ 1
TRIM28-204ENST00000594806 SLITRK2Q9H156 845 aa21.27■■□□□ 1
TRIM28-204ENST00000594806 ELL3Q9HB65 397 aaPredicted RBP21.27■■□□□ 1
TRIM28-204ENST00000594806 GSTK1Q9Y2Q3 226 aa21.27■■□□□ 1
TRIM28-204ENST00000594806 A0A1W2PPH5 198 aa21.26■□□□□ 0.99
TRIM28-204ENST00000594806 RGS9O75916 674 aaPredicted RBP21.26■□□□□ 0.99
TRIM28-204ENST00000594806 TOX4O94842 621 aa21.26■□□□□ 0.99
TRIM28-204ENST00000594806 OR3A4PP47883 348 aa21.26■□□□□ 0.99
TRIM28-204ENST00000594806 BPIFB3P59826 476 aa21.26■□□□□ 0.99
TRIM28-204ENST00000594806 RPS25P62851 125 aaKnown RBP21.26■□□□□ 0.99
TRIM28-204ENST00000594806 INSL4Q14641 139 aa21.26■□□□□ 0.99
TRIM28-204ENST00000594806 OR8H2Q8N162 312 aa21.26■□□□□ 0.99
TRIM28-204ENST00000594806 JAGN1Q8N5M9 183 aa21.26■□□□□ 0.99
TRIM28-204ENST00000594806 OR51T1Q8NGJ9 327 aa21.26■□□□□ 0.99
TRIM28-204ENST00000594806 SIRPDQ9H106 197 aa21.26■□□□□ 0.99
TRIM28-204ENST00000594806 IL36RNQ9UBH0 155 aa21.26■□□□□ 0.99
TRIM28-204ENST00000594806 NUP50Q9UKX7 468 aa21.26■□□□□ 0.99
TRIM28-204ENST00000594806 ING4Q9UNL4 249 aa21.26■□□□□ 0.99
TRIM28-204ENST00000594806 A0A1W2PQ09 198 aa21.25■□□□□ 0.99
TRIM28-204ENST00000594806 MAGEA13PA6NCF6 341 aa21.25■□□□□ 0.99
TRIM28-204ENST00000594806 CSTBP04080 98 aaKnown RBP21.25■□□□□ 0.99
TRIM28-204ENST00000594806 MMP9P14780 707 aa21.25■□□□□ 0.99
TRIM28-204ENST00000594806 ARF6P62330 175 aa21.25■□□□□ 0.99
TRIM28-204ENST00000594806 RPL31P62899 125 aaKnown RBP21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms