RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 NEURL2Q9BR09 285 aa12.87□□□□□ -0.35
VRK3-207ENST00000594092 PECRQ9BY49 303 aa12.87□□□□□ -0.35
VRK3-207ENST00000594092 ZNF581Q9P0T4 197 aa12.87□□□□□ -0.35
VRK3-207ENST00000594092 POLDIP2Q9Y2S7 368 aa12.87□□□□□ -0.35
VRK3-207ENST00000594092 ZNF736B4DX44 427 aaPredicted RBP12.86□□□□□ -0.35
VRK3-207ENST00000594092 DHFRP00374 187 aa12.86□□□□□ -0.35
VRK3-207ENST00000594092 CBX5P45973 191 aa12.86□□□□□ -0.35
VRK3-207ENST00000594092 ZNF81P51508 661 aa12.86□□□□□ -0.35
VRK3-207ENST00000594092 MPPED2Q15777 294 aa12.86□□□□□ -0.35
VRK3-207ENST00000594092 NHLRC3Q5JS37 347 aa12.86□□□□□ -0.35
VRK3-207ENST00000594092 CHAC2Q8WUX2 184 aa12.86□□□□□ -0.35
VRK3-207ENST00000594092 POM121Q96HA1 1249 aa12.86□□□□□ -0.35
VRK3-207ENST00000594092 PLEKHJ1Q9NW61 149 aa12.86□□□□□ -0.35
VRK3-207ENST00000594092 IL36RNQ9UBH0 155 aa12.86□□□□□ -0.35
VRK3-207ENST00000594092 A0A0B4J293 547 aa12.85□□□□□ -0.35
VRK3-207ENST00000594092 VSTM5A8MXK1 200 aa12.85□□□□□ -0.35
VRK3-207ENST00000594092 C3orf80F5H4A9 247 aa12.85□□□□□ -0.35
VRK3-207ENST00000594092 SPRY3O43610 288 aa12.85□□□□□ -0.35
VRK3-207ENST00000594092 SSX5O60225 188 aa12.85□□□□□ -0.35
VRK3-207ENST00000594092 RAB3DO95716 219 aa12.85□□□□□ -0.35
VRK3-207ENST00000594092 PTBP3O95758 552 aaKnown RBP12.85□□□□□ -0.35
VRK3-207ENST00000594092 HNRNPCP07910 306 aaKnown RBP eCLIP12.85□□□□□ -0.35
VRK3-207ENST00000594092 H2AFB2P0C5Z0 115 aa12.85□□□□□ -0.35
VRK3-207ENST00000594092 PGA5P0DJD9 388 aa12.85□□□□□ -0.35
VRK3-207ENST00000594092 RAB25P57735 213 aa12.85□□□□□ -0.35
VRK3-207ENST00000594092 ERVK11-1P61568 191 aa12.85□□□□□ -0.35
VRK3-207ENST00000594092 NKAPLQ5M9Q1 402 aa12.85□□□□□ -0.35
VRK3-207ENST00000594092 OR56B4Q8NH76 319 aa12.85□□□□□ -0.35
VRK3-207ENST00000594092 ST8SIA4Q92187 359 aa12.85□□□□□ -0.35
VRK3-207ENST00000594092 PIK3IP1Q96FE7 263 aa12.85□□□□□ -0.35
VRK3-207ENST00000594092 C20orf85Q9H1P6 137 aa12.85□□□□□ -0.35
VRK3-207ENST00000594092 RHOFQ9HBH0 211 aa12.85□□□□□ -0.35
VRK3-207ENST00000594092 HSF4Q9ULV5 492 aa12.85□□□□□ -0.35
VRK3-207ENST00000594092 A6NLC8 198 aa12.85□□□□□ -0.35
VRK3-207ENST00000594092 CA11O75493 328 aa12.85□□□□□ -0.35
VRK3-207ENST00000594092 CD74P04233 296 aa12.85□□□□□ -0.35
VRK3-207ENST00000594092 ACAA1P09110 424 aaPredicted RBP12.85□□□□□ -0.35
VRK3-207ENST00000594092 PRKACAP17612 351 aa12.85□□□□□ -0.35
VRK3-207ENST00000594092 HLA-DMAP28067 261 aa12.85□□□□□ -0.35
VRK3-207ENST00000594092 CHATP28329 748 aa12.85□□□□□ -0.35
VRK3-207ENST00000594092 SERPINF1P36955 418 aa12.85□□□□□ -0.35
VRK3-207ENST00000594092 SNU13P55769 128 aaKnown RBP12.85□□□□□ -0.35
VRK3-207ENST00000594092 RAG2P55895 527 aa12.85□□□□□ -0.35
VRK3-207ENST00000594092 MEF2DQ14814 521 aa12.85□□□□□ -0.35
VRK3-207ENST00000594092 PDCD1Q15116 288 aa12.85□□□□□ -0.35
VRK3-207ENST00000594092 ZNF826PQ6ZT77 177 aa12.85□□□□□ -0.35
VRK3-207ENST00000594092 C6orf201Q7Z4U5 140 aa12.85□□□□□ -0.35
VRK3-207ENST00000594092 AKAP14Q86UN6 197 aa12.85□□□□□ -0.35
VRK3-207ENST00000594092 Q8IYB0 196 aa12.85□□□□□ -0.35
VRK3-207ENST00000594092 FAM58AQ8N1B3 248 aa12.85□□□□□ -0.35
VRK3-207ENST00000594092 GVQW1Q8N7I0 195 aa12.85□□□□□ -0.35
VRK3-207ENST00000594092 OR4D10Q8NGI6 311 aa12.85□□□□□ -0.35
VRK3-207ENST00000594092 LILRB1Q8NHL6 650 aaPredicted RBP12.85□□□□□ -0.35
VRK3-207ENST00000594092 EMG1Q92979 244 aaKnown RBP12.85□□□□□ -0.35
VRK3-207ENST00000594092 MEGF10Q96KG7 1140 aa12.85□□□□□ -0.35
VRK3-207ENST00000594092 OR2V2Q96R30 315 aa12.85□□□□□ -0.35
VRK3-207ENST00000594092 NRIP2Q9BQI9 281 aa12.85□□□□□ -0.35
VRK3-207ENST00000594092 TMEM204Q9BSN7 226 aa12.85□□□□□ -0.35
VRK3-207ENST00000594092 UFSP2Q9NUQ7 469 aa12.85□□□□□ -0.35
VRK3-207ENST00000594092 ALG5Q9Y673 324 aa12.85□□□□□ -0.35
VRK3-207ENST00000594092 KMT2BQ9UMN6 2715 aaPredicted RBP12.84□□□□□ -0.35
VRK3-207ENST00000594092 FAM90A10PA6NDY2 464 aa12.84□□□□□ -0.35
VRK3-207ENST00000594092 FAM90A18PA6NE21 464 aa12.84□□□□□ -0.35
VRK3-207ENST00000594092 FAM90A16PA6NEW6 464 aa12.84□□□□□ -0.35
VRK3-207ENST00000594092 FAM90A20PA6NIJ5 464 aa12.84□□□□□ -0.35
VRK3-207ENST00000594092 FAM90A8PA6NJQ4 464 aa12.84□□□□□ -0.35
VRK3-207ENST00000594092 FAM90A7PA6NKC0 464 aa12.84□□□□□ -0.35
VRK3-207ENST00000594092 FAM90A22PA8MWA6 464 aa12.84□□□□□ -0.35
VRK3-207ENST00000594092 FAM90A12PA8MX19 464 aa12.84□□□□□ -0.35
VRK3-207ENST00000594092 FAM90A5PA8MXJ8 464 aa12.84□□□□□ -0.35
VRK3-207ENST00000594092 FAM90A23PA8MXZ1 464 aa12.84□□□□□ -0.35
VRK3-207ENST00000594092 C19orf84I3L1E1 186 aa12.84□□□□□ -0.35
VRK3-207ENST00000594092 NOS1APO75052 506 aaPredicted RBP12.84□□□□□ -0.35
VRK3-207ENST00000594092 IGHV1-46P01743 117 aa12.84□□□□□ -0.35
VRK3-207ENST00000594092 FAM90A15PP0C7V4 464 aa12.84□□□□□ -0.35
VRK3-207ENST00000594092 FAM90A13PP0C7W8 464 aa12.84□□□□□ -0.35
VRK3-207ENST00000594092 FAM90A14PP0C7W9 464 aa12.84□□□□□ -0.35
VRK3-207ENST00000594092 FAM90A24PP0C7X0 464 aa12.84□□□□□ -0.35
VRK3-207ENST00000594092 SPRNQ5BIV9 151 aa12.84□□□□□ -0.35
VRK3-207ENST00000594092 WDR82Q6UXN9 313 aa12.84□□□□□ -0.35
VRK3-207ENST00000594092 POC1AQ8NBT0 407 aa12.84□□□□□ -0.35
VRK3-207ENST00000594092 ZDHHC8Q9ULC8 765 aa12.84□□□□□ -0.35
VRK3-207ENST00000594092 ANAPC10Q9UM13 185 aa12.84□□□□□ -0.35
VRK3-207ENST00000594092 PRSS44E7EML9 344 aa12.83□□□□□ -0.35
VRK3-207ENST00000594092 M0QYG6 137 aa12.83□□□□□ -0.35
VRK3-207ENST00000594092 NDUFB6O95139 128 aa12.83□□□□□ -0.35
VRK3-207ENST00000594092 TBPP20226 339 aa12.83□□□□□ -0.35
VRK3-207ENST00000594092 APOBEC3AP31941 199 aaPredicted RBP12.83□□□□□ -0.35
VRK3-207ENST00000594092 RBMS2Q15434 407 aaKnown RBP12.83□□□□□ -0.35
VRK3-207ENST00000594092 RNASE10Q5GAN6 216 aaKnown RBP12.83□□□□□ -0.35
VRK3-207ENST00000594092 OR4S1Q8NGB4 309 aa12.83□□□□□ -0.35
VRK3-207ENST00000594092 OR51S1Q8NGJ8 323 aa12.83□□□□□ -0.35
VRK3-207ENST00000594092 ITLN1Q8WWA0 313 aa12.83□□□□□ -0.35
VRK3-207ENST00000594092 HPS1Q92902 700 aa12.83□□□□□ -0.35
VRK3-207ENST00000594092 OCSTAMPQ9BR26 566 aa12.83□□□□□ -0.35
VRK3-207ENST00000594092 ETAA1Q9NY74 926 aa12.83□□□□□ -0.35
VRK3-207ENST00000594092 CISD1Q9NZ45 108 aaKnown RBP12.83□□□□□ -0.35
VRK3-207ENST00000594092 PLEKHA6Q9Y2H5 1048 aa12.83□□□□□ -0.35
VRK3-207ENST00000594092 DISC1C4P0D8 188 aa12.83□□□□□ -0.36
VRK3-207ENST00000594092 PDCD6O75340 191 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms