RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 CDC14BO60729 498 aa16.6■□□□□ 0.25
LSM4-203ENST00000593829 CALCBP10092 127 aa16.6■□□□□ 0.25
LSM4-203ENST00000593829 VEGFCP49767 419 aa16.6■□□□□ 0.25
LSM4-203ENST00000593829 TP53I3Q53FA7 332 aa16.6■□□□□ 0.25
LSM4-203ENST00000593829 ZNF626Q68DY1 528 aa16.6■□□□□ 0.25
LSM4-203ENST00000593829 OR10AD1Q8NGE0 317 aa16.6■□□□□ 0.25
LSM4-203ENST00000593829 OR56B2PQ8NGI1 322 aa16.6■□□□□ 0.25
LSM4-203ENST00000593829 OR52I2Q8NH67 350 aa16.6■□□□□ 0.25
LSM4-203ENST00000593829 FCAMRQ8WWV6 532 aa16.6■□□□□ 0.25
LSM4-203ENST00000593829 SLC25A38Q96DW6 304 aa16.6■□□□□ 0.25
LSM4-203ENST00000593829 PBOV1Q9GZY1 135 aa16.6■□□□□ 0.25
LSM4-203ENST00000593829 SDHAF2Q9NX18 166 aa16.6■□□□□ 0.25
LSM4-203ENST00000593829 MRPL15Q9P015 296 aaKnown RBP16.6■□□□□ 0.25
LSM4-203ENST00000593829 IL19Q9UHD0 177 aa16.6■□□□□ 0.25
LSM4-203ENST00000593829 SESN1Q9Y6P5 492 aa16.6■□□□□ 0.25
LSM4-203ENST00000593829 R4GMQ9 66 aa16.6■□□□□ 0.25
LSM4-203ENST00000593829 hCG_38984A0A1B0GV85 526 aa16.6■□□□□ 0.25
LSM4-203ENST00000593829 HMSDA8MTL9 139 aa16.6■□□□□ 0.25
LSM4-203ENST00000593829 MCRIP1C9JLW8 97 aa16.6■□□□□ 0.25
LSM4-203ENST00000593829 L7N2F9 121 aa16.6■□□□□ 0.25
LSM4-203ENST00000593829 TNFRSF1AP19438 455 aa16.6■□□□□ 0.25
LSM4-203ENST00000593829 CXCL2P19875 107 aa16.6■□□□□ 0.25
LSM4-203ENST00000593829 MFGE8Q08431 387 aaPredicted RBP16.6■□□□□ 0.25
LSM4-203ENST00000593829 SFRP4Q6FHJ7 346 aaPredicted RBP16.6■□□□□ 0.25
LSM4-203ENST00000593829 SHARPINQ9H0F6 387 aa16.6■□□□□ 0.25
LSM4-203ENST00000593829 MOB1AQ9H8S9 216 aa16.6■□□□□ 0.25
LSM4-203ENST00000593829 FLVCR2Q9UPI3 526 aa16.6■□□□□ 0.25
LSM4-203ENST00000593829 NOP16Q9Y3C1 178 aaKnown RBP16.6■□□□□ 0.25
LSM4-203ENST00000593829 ZNF469Q96JG9 3925 aaPredicted RBP16.6■□□□□ 0.25
LSM4-203ENST00000593829 F8P00451 2351 aa16.59■□□□□ 0.25
LSM4-203ENST00000593829 CHD3Q12873 2000 aaKnown RBP16.59■□□□□ 0.25
LSM4-203ENST00000593829 A0A0U1RQV5 110 aa16.59■□□□□ 0.25
LSM4-203ENST00000593829 H0YL77 283 aa16.59■□□□□ 0.25
LSM4-203ENST00000593829 MLNRO43193 412 aa16.59■□□□□ 0.25
LSM4-203ENST00000593829 SRSF10O75494 262 aaKnown RBP16.59■□□□□ 0.25
LSM4-203ENST00000593829 RPP14O95059 124 aaKnown RBP16.59■□□□□ 0.25
LSM4-203ENST00000593829 PNPP00491 289 aa16.59■□□□□ 0.25
LSM4-203ENST00000593829 SRMP19623 302 aa16.59■□□□□ 0.25
LSM4-203ENST00000593829 NFYAP23511 347 aaPredicted RBP16.59■□□□□ 0.25
LSM4-203ENST00000593829 GSK3AP49840 483 aa16.59■□□□□ 0.25
LSM4-203ENST00000593829 TMEM33P57088 247 aa16.59■□□□□ 0.25
LSM4-203ENST00000593829 HFEQ30201 348 aa16.59■□□□□ 0.25
LSM4-203ENST00000593829 LIPNQ5VXI9 398 aa16.59■□□□□ 0.25
LSM4-203ENST00000593829 FAM220AQ7Z4H9 259 aa16.59■□□□□ 0.25
LSM4-203ENST00000593829 OR2V2Q96R30 315 aa16.59■□□□□ 0.25
LSM4-203ENST00000593829 OR14A2Q96R54 314 aa16.59■□□□□ 0.25
LSM4-203ENST00000593829 GFI1Q99684 422 aa16.59■□□□□ 0.25
LSM4-203ENST00000593829 GTF2A1LQ9UNN4 478 aa16.59■□□□□ 0.25
LSM4-203ENST00000593829 ETV7Q9Y603 341 aa16.59■□□□□ 0.25
LSM4-203ENST00000593829 TRBV2A0A0J9YWF9 115 aa16.58■□□□□ 0.25
LSM4-203ENST00000593829 A8MXK9 166 aa16.58■□□□□ 0.25
LSM4-203ENST00000593829 ARPC1BO15143 372 aaKnown RBP16.58■□□□□ 0.25
LSM4-203ENST00000593829 CREBL2O60519 120 aaPredicted RBP16.58■□□□□ 0.25
LSM4-203ENST00000593829 RP2O75695 350 aa16.58■□□□□ 0.25
LSM4-203ENST00000593829 NDUFB6O95139 128 aa16.58■□□□□ 0.25
LSM4-203ENST00000593829 ALDOBP05062 364 aa16.58■□□□□ 0.25
LSM4-203ENST00000593829 CA6P23280 308 aa16.58■□□□□ 0.25
LSM4-203ENST00000593829 SPRNQ5BIV9 151 aa16.58■□□□□ 0.25
LSM4-203ENST00000593829 LYZL4Q96KX0 146 aa16.58■□□□□ 0.25
LSM4-203ENST00000593829 BPESC1Q9GZL8 116 aa16.58■□□□□ 0.25
LSM4-203ENST00000593829 GNG8Q9UK08 70 aa16.58■□□□□ 0.25
LSM4-203ENST00000593829 OR52A1Q9UKL2 312 aa16.58■□□□□ 0.25
LSM4-203ENST00000593829 PIN1P1O15428 100 aa16.58■□□□□ 0.24
LSM4-203ENST00000593829 RGS11O94810 467 aa16.58■□□□□ 0.24
LSM4-203ENST00000593829 TACSTD2P09758 323 aa16.58■□□□□ 0.24
LSM4-203ENST00000593829 NUP62P37198 522 aaPredicted RBP16.58■□□□□ 0.24
LSM4-203ENST00000593829 SCAND1P57086 179 aa16.58■□□□□ 0.24
LSM4-203ENST00000593829 OR8B8Q15620 311 aa16.58■□□□□ 0.24
LSM4-203ENST00000593829 EIF4E3Q8N5X7 224 aaKnown RBP16.58■□□□□ 0.24
LSM4-203ENST00000593829 MAPK1IP1LQ8NDC0 245 aa16.58■□□□□ 0.24
LSM4-203ENST00000593829 CSNK2A3Q8NEV1 391 aa16.58■□□□□ 0.24
LSM4-203ENST00000593829 SCARB1Q8WTV0 552 aa16.58■□□□□ 0.24
LSM4-203ENST00000593829 ITLN1Q8WWA0 313 aa16.58■□□□□ 0.24
LSM4-203ENST00000593829 ASB13Q8WXK3 278 aa16.58■□□□□ 0.24
LSM4-203ENST00000593829 S100A16Q96FQ6 103 aaKnown RBP16.58■□□□□ 0.24
LSM4-203ENST00000593829 DERL3Q96Q80 235 aa16.58■□□□□ 0.24
LSM4-203ENST00000593829 BEX1Q9HBH7 125 aa16.58■□□□□ 0.24
LSM4-203ENST00000593829 NOX4Q9NPH5 578 aa16.58■□□□□ 0.24
LSM4-203ENST00000593829 G6PC2Q9NQR9 355 aa16.58■□□□□ 0.24
LSM4-203ENST00000593829 FOXJ3Q9UPW0 622 aa16.58■□□□□ 0.24
LSM4-203ENST00000593829 ANKRD30BLA7E2S9 258 aa16.57■□□□□ 0.24
LSM4-203ENST00000593829 F5H5P2 479 aa16.57■□□□□ 0.24
LSM4-203ENST00000593829 NMBP08949 121 aa16.57■□□□□ 0.24
LSM4-203ENST00000593829 USF1P22415 310 aaPredicted RBP16.57■□□□□ 0.24
LSM4-203ENST00000593829 LOXL1Q08397 574 aaPredicted RBP16.57■□□□□ 0.24
LSM4-203ENST00000593829 OR8G1Q15617 311 aa16.57■□□□□ 0.24
LSM4-203ENST00000593829 IZUMO1Q8IYV9 350 aa16.57■□□□□ 0.24
LSM4-203ENST00000593829 CCL17Q92583 94 aa16.57■□□□□ 0.24
LSM4-203ENST00000593829 PPP1R14AQ96A00 147 aa16.57■□□□□ 0.24
LSM4-203ENST00000593829 MEGF10Q96KG7 1140 aa16.57■□□□□ 0.24
LSM4-203ENST00000593829 ZNF281Q9Y2X9 895 aa16.57■□□□□ 0.24
LSM4-203ENST00000593829 A0A096LNT2 108 aa16.57■□□□□ 0.24
LSM4-203ENST00000593829 A0A1W2PPK0 400 aa16.57■□□□□ 0.24
LSM4-203ENST00000593829 MAPK3P27361 379 aaPredicted RBP16.57■□□□□ 0.24
LSM4-203ENST00000593829 GPR6P46095 362 aaPredicted RBP16.57■□□□□ 0.24
LSM4-203ENST00000593829 COMMD2Q86X83 199 aa16.57■□□□□ 0.24
LSM4-203ENST00000593829 LURAP1LQ8IV03 231 aa16.57■□□□□ 0.24
LSM4-203ENST00000593829 OR51E1Q8TCB6 317 aa16.57■□□□□ 0.24
LSM4-203ENST00000593829 PCNPQ8WW12 178 aaKnown RBP16.57■□□□□ 0.24
LSM4-203ENST00000593829 ADAT1Q9BUB4 502 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms