RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 IFT22Q9H7X7 185 aa11.24□□□□□ -0.61
DNMT1-228ENST00000592705 IGKV1-8A0A0C4DH67 115 aa11.24□□□□□ -0.61
DNMT1-228ENST00000592705 CENPVL1A0A0U1RR11 272 aa11.24□□□□□ -0.61
DNMT1-228ENST00000592705 CLEC18AA5D8T8 446 aa11.24□□□□□ -0.61
DNMT1-228ENST00000592705 HRKO00198 91 aa11.24□□□□□ -0.61
DNMT1-228ENST00000592705 CST7O76096 145 aa11.24□□□□□ -0.61
DNMT1-228ENST00000592705 AKR1C3P42330 323 aa11.24□□□□□ -0.61
DNMT1-228ENST00000592705 FUT5Q11128 374 aa11.24□□□□□ -0.61
DNMT1-228ENST00000592705 BTNL8Q6UX41 500 aa11.24□□□□□ -0.61
DNMT1-228ENST00000592705 CLEC18CQ8NCF0 446 aa11.24□□□□□ -0.61
DNMT1-228ENST00000592705 OR8B12Q8NGG6 310 aa11.24□□□□□ -0.61
DNMT1-228ENST00000592705 ALX4Q9H161 411 aaPredicted RBP11.24□□□□□ -0.61
DNMT1-228ENST00000592705 GAR1Q9NY12 217 aaKnown RBP11.24□□□□□ -0.61
DNMT1-228ENST00000592705 IGHV3-64DA0A0J9YX35 117 aa11.24□□□□□ -0.61
DNMT1-228ENST00000592705 SPINT1O43278 529 aa11.24□□□□□ -0.61
DNMT1-228ENST00000592705 KLF3P57682 345 aaPredicted RBP11.24□□□□□ -0.61
DNMT1-228ENST00000592705 C1orf185Q5T7R7 199 aa11.24□□□□□ -0.61
DNMT1-228ENST00000592705 SPNS3Q6ZMD2 512 aa11.24□□□□□ -0.61
DNMT1-228ENST00000592705 ONECUT1Q9UBC0 465 aa11.24□□□□□ -0.61
DNMT1-228ENST00000592705 LYZL6O75951 148 aa11.23□□□□□ -0.61
DNMT1-228ENST00000592705 LIMK1P53667 647 aa11.23□□□□□ -0.61
DNMT1-228ENST00000592705 ZNF468Q5VIY5 522 aaPredicted RBP11.23□□□□□ -0.61
DNMT1-228ENST00000592705 BHLHA15Q7RTS1 189 aaPredicted RBP11.23□□□□□ -0.61
DNMT1-228ENST00000592705 ERGIC1Q969X5 290 aa11.23□□□□□ -0.61
DNMT1-228ENST00000592705 SLC35B3Q9H1N7 401 aa11.23□□□□□ -0.61
DNMT1-228ENST00000592705 C3orf85A0A1B0GTC6 90 aa11.23□□□□□ -0.61
DNMT1-228ENST00000592705 TMEM218A2RU14 115 aa11.23□□□□□ -0.61
DNMT1-228ENST00000592705 LIPT2A6NK58 231 aa11.23□□□□□ -0.61
DNMT1-228ENST00000592705 FABP1P07148 127 aa11.23□□□□□ -0.61
DNMT1-228ENST00000592705 SUB1P53999 127 aaKnown RBP eCLIP11.23□□□□□ -0.612e-11■■■■■ 90.2
DNMT1-228ENST00000592705 OR2T2Q6IF00 324 aa11.23□□□□□ -0.61
DNMT1-228ENST00000592705 CLEC18BQ6UXF7 455 aa11.23□□□□□ -0.61
DNMT1-228ENST00000592705 MOB1BQ7L9L4 216 aa11.23□□□□□ -0.61
DNMT1-228ENST00000592705 TSEN54Q7Z6J9 526 aaKnown RBP11.23□□□□□ -0.61
DNMT1-228ENST00000592705 NECAP1Q8NC96 275 aa11.23□□□□□ -0.61
DNMT1-228ENST00000592705 RYDENQ9NUL5 291 aaKnown RBP11.23□□□□□ -0.61
DNMT1-228ENST00000592705 FBXL17Q9UF56 701 aa11.23□□□□□ -0.61
DNMT1-228ENST00000592705 PDCD6O75340 191 aa11.23□□□□□ -0.61
DNMT1-228ENST00000592705 CALCRP30988 508 aa11.23□□□□□ -0.61
DNMT1-228ENST00000592705 ALKBH6Q3KRA9 238 aa11.23□□□□□ -0.61
DNMT1-228ENST00000592705 Q8IYB0 196 aa11.23□□□□□ -0.61
DNMT1-228ENST00000592705 MS4A5Q9H3V2 200 aa11.23□□□□□ -0.61
DNMT1-228ENST00000592705 MTCH1Q9NZJ7 389 aa11.23□□□□□ -0.61
DNMT1-228ENST00000592705 HLA-DQB1P01920 261 aa11.23□□□□□ -0.61
DNMT1-228ENST00000592705 MAGEA5P43359 124 aa11.23□□□□□ -0.61
DNMT1-228ENST00000592705 ZNF90Q03938 601 aa11.23□□□□□ -0.61
DNMT1-228ENST00000592705 MICBQ29980 383 aa11.23□□□□□ -0.61
DNMT1-228ENST00000592705 ZNF439Q8NDP4 499 aa11.23□□□□□ -0.61
DNMT1-228ENST00000592705 TMEM52Q8NDY8 209 aa11.23□□□□□ -0.61
DNMT1-228ENST00000592705 OR2Z1Q8NG97 314 aa11.23□□□□□ -0.61
DNMT1-228ENST00000592705 PTPMT1Q8WUK0 201 aaPredicted RBP11.23□□□□□ -0.61
DNMT1-228ENST00000592705 C10orf35Q96D05 121 aa11.23□□□□□ -0.61
DNMT1-228ENST00000592705 RAB40CQ96S21 281 aa11.23□□□□□ -0.61
DNMT1-228ENST00000592705 RASL10BQ96S79 203 aa11.23□□□□□ -0.61
DNMT1-228ENST00000592705 UQCC1Q9NVA1 299 aa11.23□□□□□ -0.61
DNMT1-228ENST00000592705 RASL12Q9NYN1 266 aa11.23□□□□□ -0.61
DNMT1-228ENST00000592705 TDRD15B5MCY1 1934 aaKnown RBP11.23□□□□□ -0.61
DNMT1-228ENST00000592705 AQP7P3A6NL99 342 aa11.22□□□□□ -0.61
DNMT1-228ENST00000592705 YIF1AO95070 293 aa11.22□□□□□ -0.61
DNMT1-228ENST00000592705 CLEC3BP05452 202 aa11.22□□□□□ -0.61
DNMT1-228ENST00000592705 NQO2P16083 231 aa11.22□□□□□ -0.61
DNMT1-228ENST00000592705 TAS2R45P59539 299 aa11.22□□□□□ -0.61
DNMT1-228ENST00000592705 FZD5Q13467 585 aa11.22□□□□□ -0.61
DNMT1-228ENST00000592705 ZNF345Q14585 488 aa11.22□□□□□ -0.61
DNMT1-228ENST00000592705 FAM181AQ8N9Y4 354 aa11.22□□□□□ -0.61
DNMT1-228ENST00000592705 OR13G1Q8NGZ3 307 aa11.22□□□□□ -0.61
DNMT1-228ENST00000592705 OR10AC1Q8NH08 325 aa11.22□□□□□ -0.61
DNMT1-228ENST00000592705 EDARADDQ8WWZ3 215 aa11.22□□□□□ -0.61
DNMT1-228ENST00000592705 PTX4Q96A99 478 aa11.22□□□□□ -0.61
DNMT1-228ENST00000592705 GALMQ96C23 342 aa11.22□□□□□ -0.61
DNMT1-228ENST00000592705 TM4SF19Q96DZ7 209 aa11.22□□□□□ -0.61
DNMT1-228ENST00000592705 SLC35E1Q96K37 410 aa11.22□□□□□ -0.61
DNMT1-228ENST00000592705 TOLLIPQ9H0E2 274 aa11.22□□□□□ -0.61
DNMT1-228ENST00000592705 ZNF331Q9NQX6 463 aaPredicted RBP11.22□□□□□ -0.61
DNMT1-228ENST00000592705 RAXQ9Y2V3 346 aa11.22□□□□□ -0.61
DNMT1-228ENST00000592705 CACNA1CQ13936 2221 aa11.22□□□□□ -0.61
DNMT1-228ENST00000592705 FAM186AA6NE01 2351 aa11.22□□□□□ -0.61
DNMT1-228ENST00000592705 ONECUT2O95948 504 aa11.22□□□□□ -0.61
DNMT1-228ENST00000592705 LIFP15018 202 aa11.22□□□□□ -0.61
DNMT1-228ENST00000592705 FCARP24071 287 aa11.22□□□□□ -0.61
DNMT1-228ENST00000592705 LSM6P62312 80 aaKnown RBP11.22□□□□□ -0.61
DNMT1-228ENST00000592705 ZNF774Q6NX45 483 aa11.22□□□□□ -0.61
DNMT1-228ENST00000592705 MITD1Q8WV92 249 aa11.22□□□□□ -0.61
DNMT1-228ENST00000592705 MRPS24Q96EL2 167 aaKnown RBP11.22□□□□□ -0.61
DNMT1-228ENST00000592705 SOX7Q9BT81 388 aa11.22□□□□□ -0.61
DNMT1-228ENST00000592705 GDF9O60383 454 aa11.22□□□□□ -0.61
DNMT1-228ENST00000592705 ADAP1O75689 374 aa11.22□□□□□ -0.61
DNMT1-228ENST00000592705 NANOS3P60323 173 aaKnown RBP11.22□□□□□ -0.61
DNMT1-228ENST00000592705 GNG3P63215 75 aa11.22□□□□□ -0.61
DNMT1-228ENST00000592705 CA10Q9NS85 328 aa11.22□□□□□ -0.61
DNMT1-228ENST00000592705 SF3B6Q9Y3B4 125 aaKnown RBP11.22□□□□□ -0.61
DNMT1-228ENST00000592705 ZNFX1Q9P2E3 1918 aaKnown RBP11.22□□□□□ -0.61
DNMT1-228ENST00000592705 ADAM20O43506 726 aa11.22□□□□□ -0.61
DNMT1-228ENST00000592705 RPL7L1Q6DKI1 246 aaKnown RBP11.22□□□□□ -0.61
DNMT1-228ENST00000592705 RNF133Q8WVZ7 376 aa11.22□□□□□ -0.61
DNMT1-228ENST00000592705 DPF1Q92782 380 aa11.22□□□□□ -0.61
DNMT1-228ENST00000592705 TMEM74BQ9NUR3 256 aa11.22□□□□□ -0.61
DNMT1-228ENST00000592705 CEP250Q9BV73 2442 aa11.22□□□□□ -0.61
DNMT1-228ENST00000592705 NCOR1O75376 2440 aa11.22□□□□□ -0.61
DNMT1-228ENST00000592705 TCRBV16S1A1N1A0A5B0 115 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms