RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-238	ENST00000592412	MRM2	Q9UI43	246 aa	Known RBP	14.54	□□□□□ -0.08
CIRBP-238	ENST00000592412	OR2F2	O95006	317 aa		14.53	□□□□□ -0.08
CIRBP-238	ENST00000592412	HAND1	O96004	215 aa		14.53	□□□□□ -0.08
CIRBP-238	ENST00000592412	GDNF	P39905	211 aa		14.53	□□□□□ -0.08
CIRBP-238	ENST00000592412	ZNF91	Q05481	1191 aa		14.53	□□□□□ -0.08
CIRBP-238	ENST00000592412	GRK1	Q15835	563 aa		14.53	□□□□□ -0.08
CIRBP-238	ENST00000592412	SNAPC1	Q16533	368 aa		14.53	□□□□□ -0.08
CIRBP-238	ENST00000592412	CANT1	Q8WVQ1	401 aa		14.53	□□□□□ -0.08
CIRBP-238	ENST00000592412	RBM14	Q96PK6	669 aa	Known RBP	14.53	□□□□□ -0.08
CIRBP-238	ENST00000592412	CNN2	Q99439	309 aa	Known RBP	14.53	□□□□□ -0.08
CIRBP-238	ENST00000592412	SEBOX	Q9HB31	216 aa	Predicted RBP	14.53	□□□□□ -0.08
CIRBP-238	ENST00000592412	DPM3	Q9P2X0	92 aa		14.53	□□□□□ -0.08
CIRBP-238	ENST00000592412	HHLA2	Q9UM44	414 aa		14.53	□□□□□ -0.08
CIRBP-238	ENST00000592412		H3BSH0	61 aa		14.52	□□□□□ -0.09
CIRBP-238	ENST00000592412		M0R129	80 aa		14.52	□□□□□ -0.09
CIRBP-238	ENST00000592412	PRKY	O43930	277 aa		14.52	□□□□□ -0.09
CIRBP-238	ENST00000592412	IGLV1-47	P01700	117 aa		14.52	□□□□□ -0.09
CIRBP-238	ENST00000592412	DUSP1	P28562	367 aa		14.52	□□□□□ -0.09
CIRBP-238	ENST00000592412	OR3A1	P47881	315 aa		14.52	□□□□□ -0.09
CIRBP-238	ENST00000592412	BDH1	Q02338	343 aa		14.52	□□□□□ -0.09
CIRBP-238	ENST00000592412	IL18R1	Q13478	541 aa		14.52	□□□□□ -0.09
CIRBP-238	ENST00000592412	KHDC1L	Q5JSQ8	128 aa		14.52	□□□□□ -0.09
CIRBP-238	ENST00000592412	PRAMEF5	Q5TYX0	476 aa		14.52	□□□□□ -0.09
CIRBP-238	ENST00000592412	SLC25A26	Q70HW3	274 aa		14.52	□□□□□ -0.09
CIRBP-238	ENST00000592412	SSX6	Q7RTT6	188 aa		14.52	□□□□□ -0.09
CIRBP-238	ENST00000592412	ABHD12	Q8N2K0	398 aa		14.52	□□□□□ -0.09
CIRBP-238	ENST00000592412	ASB9	Q96DX5	294 aa		14.52	□□□□□ -0.09
CIRBP-238	ENST00000592412	AKR1E2	Q96JD6	320 aa		14.52	□□□□□ -0.09
CIRBP-238	ENST00000592412	ADGRL4	Q9HBW9	690 aa		14.52	□□□□□ -0.09
CIRBP-238	ENST00000592412	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	14.52	□□□□□ -0.09	4e-8	■■■□□ 15.2
CIRBP-238	ENST00000592412	FAM172BP	A6NC97	362 aa		14.51	□□□□□ -0.09
CIRBP-238	ENST00000592412	GABRR1	P24046	479 aa		14.51	□□□□□ -0.09
CIRBP-238	ENST00000592412	PEX2	P28328	305 aa		14.51	□□□□□ -0.09
CIRBP-238	ENST00000592412	NPBWR2	P48146	333 aa		14.51	□□□□□ -0.09
CIRBP-238	ENST00000592412	ODF4	Q2M2E3	257 aa		14.51	□□□□□ -0.09
CIRBP-238	ENST00000592412	UTF1	Q5T230	341 aa		14.51	□□□□□ -0.09
CIRBP-238	ENST00000592412	ZBTB49	Q6ZSB9	765 aa		14.51	□□□□□ -0.09
CIRBP-238	ENST00000592412	C18orf65	Q6ZTR6	163 aa		14.51	□□□□□ -0.09
CIRBP-238	ENST00000592412	EGFL6	Q8IUX8	553 aa		14.51	□□□□□ -0.09
CIRBP-238	ENST00000592412	SLC35F2	Q8IXU6	374 aa		14.51	□□□□□ -0.09
CIRBP-238	ENST00000592412	EMG1	Q92979	244 aa	Known RBP	14.51	□□□□□ -0.09
CIRBP-238	ENST00000592412	CCDC124	Q96CT7	223 aa	Known RBP	14.51	□□□□□ -0.09
CIRBP-238	ENST00000592412	ZNF556	Q9HAH1	456 aa		14.51	□□□□□ -0.09
CIRBP-238	ENST00000592412	RBFOX1	Q9NWB1	397 aa	Known RBP	14.51	□□□□□ -0.09
CIRBP-238	ENST00000592412	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	14.51	□□□□□ -0.09
CIRBP-238	ENST00000592412	SNX5	Q9Y5X3	404 aa		14.51	□□□□□ -0.09
CIRBP-238	ENST00000592412		E9PQ18	207 aa		14.5	□□□□□ -0.09
CIRBP-238	ENST00000592412	CCDC159	P0C7I6	412 aa		14.5	□□□□□ -0.09
CIRBP-238	ENST00000592412	ANXA8	P13928	327 aa		14.5	□□□□□ -0.09
CIRBP-238	ENST00000592412	ERP29	P30040	261 aa	Known RBP	14.5	□□□□□ -0.09
CIRBP-238	ENST00000592412	THBS3	P49746	956 aa		14.5	□□□□□ -0.09
CIRBP-238	ENST00000592412	CRISP1	P54107	249 aa		14.5	□□□□□ -0.09
CIRBP-238	ENST00000592412	P2RX3	P56373	397 aa		14.5	□□□□□ -0.09
CIRBP-238	ENST00000592412	MEPCE	Q7L2J0	689 aa	Known RBP	14.5	□□□□□ -0.09
CIRBP-238	ENST00000592412	OSR2	Q8N2R0	312 aa		14.5	□□□□□ -0.09
CIRBP-238	ENST00000592412	CHST5	Q9GZS9	411 aa		14.5	□□□□□ -0.09
CIRBP-238	ENST00000592412	ZNF286A	Q9HBT8	521 aa		14.5	□□□□□ -0.09
CIRBP-238	ENST00000592412	SLC7A11	Q9UPY5	501 aa		14.5	□□□□□ -0.09
CIRBP-238	ENST00000592412	UBE2J1	Q9Y385	318 aa	Predicted RBP	14.5	□□□□□ -0.09
CIRBP-238	ENST00000592412	EPPK1	P58107	5090 aa	Known RBP	14.5	□□□□□ -0.09
CIRBP-238	ENST00000592412	LY6L	H3BQJ8	138 aa		14.49	□□□□□ -0.09
CIRBP-238	ENST00000592412	GNGT2	O14610	69 aa		14.49	□□□□□ -0.09
CIRBP-238	ENST00000592412	MGST3	O14880	152 aa		14.49	□□□□□ -0.09
CIRBP-238	ENST00000592412	ENTPD6	O75354	484 aa		14.49	□□□□□ -0.09
CIRBP-238	ENST00000592412	CLIC3	O95833	236 aa		14.49	□□□□□ -0.09
CIRBP-238	ENST00000592412	CALCB	P10092	127 aa		14.49	□□□□□ -0.09
CIRBP-238	ENST00000592412	CDK2	P24941	298 aa		14.49	□□□□□ -0.09
CIRBP-238	ENST00000592412	BRS3	P32247	399 aa		14.49	□□□□□ -0.09
CIRBP-238	ENST00000592412	FUT6	P51993	359 aa		14.49	□□□□□ -0.09
CIRBP-238	ENST00000592412	EFNB1	P98172	346 aa		14.49	□□□□□ -0.09
CIRBP-238	ENST00000592412	ZNF146	Q15072	292 aa		14.49	□□□□□ -0.09
CIRBP-238	ENST00000592412	AADACL4	Q5VUY2	407 aa		14.49	□□□□□ -0.09
CIRBP-238	ENST00000592412	HEPN1	Q6WQI6	88 aa		14.49	□□□□□ -0.09
CIRBP-238	ENST00000592412	CATSPERD	Q86XM0	798 aa		14.49	□□□□□ -0.09
CIRBP-238	ENST00000592412	STMN2	Q93045	179 aa		14.49	□□□□□ -0.09
CIRBP-238	ENST00000592412	CLN6	Q9NWW5	311 aa		14.49	□□□□□ -0.09
CIRBP-238	ENST00000592412	TRBV2	A0A0J9YWF9	115 aa		14.48	□□□□□ -0.09
CIRBP-238	ENST00000592412		H3BUI4	141 aa		14.48	□□□□□ -0.09
CIRBP-238	ENST00000592412	RPP14	O95059	124 aa	Known RBP	14.48	□□□□□ -0.09
CIRBP-238	ENST00000592412	BCL3	P20749	454 aa		14.48	□□□□□ -0.09
CIRBP-238	ENST00000592412	CD34	P28906	385 aa		14.48	□□□□□ -0.09
CIRBP-238	ENST00000592412	RPL23A	P62750	156 aa	Known RBP	14.48	□□□□□ -0.09
CIRBP-238	ENST00000592412	PTGES3	Q15185	160 aa	Known RBP	14.48	□□□□□ -0.09
CIRBP-238	ENST00000592412	TPTE2P1	Q5T6R2	138 aa		14.48	□□□□□ -0.09
CIRBP-238	ENST00000592412	SLX4IP	Q5VYV7	408 aa		14.48	□□□□□ -0.09
CIRBP-238	ENST00000592412	TRAPPC6B	Q86SZ2	158 aa		14.48	□□□□□ -0.09
CIRBP-238	ENST00000592412	ZNF329	Q86UD4	541 aa		14.48	□□□□□ -0.09
CIRBP-238	ENST00000592412	RTN4RL2	Q86UN3	420 aa		14.48	□□□□□ -0.09
CIRBP-238	ENST00000592412	FAM58A	Q8N1B3	248 aa		14.48	□□□□□ -0.09
CIRBP-238	ENST00000592412	ZNF596	Q8TC21	504 aa		14.48	□□□□□ -0.09
CIRBP-238	ENST00000592412	LRGUK	Q96M69	825 aa		14.48	□□□□□ -0.09
CIRBP-238	ENST00000592412	ZNF649	Q9BS31	505 aa		14.48	□□□□□ -0.09
CIRBP-238	ENST00000592412	TEX12	Q9BXU0	123 aa		14.48	□□□□□ -0.09
CIRBP-238	ENST00000592412	PLEKHA1	Q9HB21	404 aa		14.48	□□□□□ -0.09
CIRBP-238	ENST00000592412	KIAA2026	Q5HYC2	2103 aa		14.48	□□□□□ -0.09
CIRBP-238	ENST00000592412	IGKV1-9	A0A0C4DH69	117 aa		14.47	□□□□□ -0.09
CIRBP-238	ENST00000592412	LEUTX	A8MZ59	168 aa		14.47	□□□□□ -0.09
CIRBP-238	ENST00000592412	ZNF670-ZNF695	F2Z2N8	137 aa		14.47	□□□□□ -0.09
CIRBP-238	ENST00000592412	BUB1B-PAK6	H3BSN5	160 aa		14.47	□□□□□ -0.09
CIRBP-238	ENST00000592412	SYT7	O43581	403 aa		14.47	□□□□□ -0.09

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