RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 EMG1Q92979 244 aaKnown RBP15.21■□□□□ 0.03
CCDC43-205ENST00000592333 SLAMF9Q96A28 289 aa15.21■□□□□ 0.03
CCDC43-205ENST00000592333 SPSB1Q96BD6 273 aa15.21■□□□□ 0.03
CCDC43-205ENST00000592333 CENPNQ96H22 339 aaPredicted RBP15.21■□□□□ 0.03
CCDC43-205ENST00000592333 MYCBPQ99417 103 aaPredicted RBP15.21■□□□□ 0.03
CCDC43-205ENST00000592333 TBX5Q99593 518 aa15.21■□□□□ 0.03
CCDC43-205ENST00000592333 WNT10AQ9GZT5 417 aa15.21■□□□□ 0.03
CCDC43-205ENST00000592333 UBE2J1Q9Y385 318 aaPredicted RBP15.21■□□□□ 0.03
CCDC43-205ENST00000592333 DSCAML1Q8TD84 2053 aa15.21■□□□□ 0.03
CCDC43-205ENST00000592333 LOC107986453A0A1B0GWG9 222 aa15.2■□□□□ 0.02
CCDC43-205ENST00000592333 FUOMA2VDF0 154 aa15.2■□□□□ 0.02
CCDC43-205ENST00000592333 FAM90A22PA8MWA6 464 aa15.2■□□□□ 0.02
CCDC43-205ENST00000592333 ACTA2P62736 377 aa15.2■□□□□ 0.02
CCDC43-205ENST00000592333 ACTG2P63267 376 aa15.2■□□□□ 0.02
CCDC43-205ENST00000592333 ACTC1P68032 377 aa15.2■□□□□ 0.02
CCDC43-205ENST00000592333 ACTA1P68133 377 aa15.2■□□□□ 0.02
CCDC43-205ENST00000592333 ZNF91Q05481 1191 aa15.2■□□□□ 0.02
CCDC43-205ENST00000592333 GRK1Q15835 563 aa15.2■□□□□ 0.02
CCDC43-205ENST00000592333 ODF4Q2M2E3 257 aa15.2■□□□□ 0.02
CCDC43-205ENST00000592333 C1orf146Q5VVC0 180 aa15.2■□□□□ 0.02
CCDC43-205ENST00000592333 OR52W1Q6IF63 320 aa15.2■□□□□ 0.02
CCDC43-205ENST00000592333 CCBE1Q6UXH8 406 aaPredicted RBP15.2■□□□□ 0.02
CCDC43-205ENST00000592333 LHFPL2Q6ZUX7 228 aa15.2■□□□□ 0.02
CCDC43-205ENST00000592333 RTN4RL2Q86UN3 420 aa15.2■□□□□ 0.02
CCDC43-205ENST00000592333 C1QL4Q86Z23 238 aa15.2■□□□□ 0.02
CCDC43-205ENST00000592333 FAM58AQ8N1B3 248 aa15.2■□□□□ 0.02
CCDC43-205ENST00000592333 PRSS35Q8N3Z0 413 aa15.2■□□□□ 0.02
CCDC43-205ENST00000592333 OR4F17Q8NGA8 305 aa15.2■□□□□ 0.02
CCDC43-205ENST00000592333 EME1Q96AY2 570 aa15.2■□□□□ 0.02
CCDC43-205ENST00000592333 OR4F4Q96R69 305 aa15.2■□□□□ 0.02
CCDC43-205ENST00000592333 NKX3-1Q99801 234 aaPredicted RBP15.2■□□□□ 0.02
CCDC43-205ENST00000592333 CLEC7AQ9BXN2 247 aa15.2■□□□□ 0.02
CCDC43-205ENST00000592333 TMEM133Q9H2Q1 129 aa15.2■□□□□ 0.02
CCDC43-205ENST00000592333 FAM53CQ9NYF3 392 aa15.2■□□□□ 0.02
CCDC43-205ENST00000592333 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.2■□□□□ 0.02
CCDC43-205ENST00000592333 IGHV2-26A0A0B4J1V2 119 aa15.19■□□□□ 0.02
CCDC43-205ENST00000592333 PAX6P26367 422 aa15.19■□□□□ 0.02
CCDC43-205ENST00000592333 CCR9P51686 369 aa15.19■□□□□ 0.02
CCDC43-205ENST00000592333 MTCP1P56278 107 aa15.19■□□□□ 0.02
CCDC43-205ENST00000592333 DYNC1I2Q13409 638 aaKnown RBP15.19■□□□□ 0.02
CCDC43-205ENST00000592333 LDLRAD2Q5SZI1 272 aa15.19■□□□□ 0.02
CCDC43-205ENST00000592333 TCF23Q7RTU1 214 aa15.19■□□□□ 0.02
CCDC43-205ENST00000592333 BATF2Q8N1L9 274 aa15.19■□□□□ 0.02
CCDC43-205ENST00000592333 ZNF676Q8N7Q3 588 aa15.19■□□□□ 0.02
CCDC43-205ENST00000592333 AKR1E2Q96JD6 320 aa15.19■□□□□ 0.02
CCDC43-205ENST00000592333 MBOAT4Q96T53 435 aa15.19■□□□□ 0.02
CCDC43-205ENST00000592333 GAL3ST2Q9H3Q3 398 aa15.19■□□□□ 0.02
CCDC43-205ENST00000592333 GNG8Q9UK08 70 aa15.19■□□□□ 0.02
CCDC43-205ENST00000592333 G3V4G9 280 aa15.18■□□□□ 0.02
CCDC43-205ENST00000592333 F2RL2O00254 374 aa15.18■□□□□ 0.02
CCDC43-205ENST00000592333 SH2D1BO14796 132 aa15.18■□□□□ 0.02
CCDC43-205ENST00000592333 PLXNB1O43157 2135 aa15.18■□□□□ 0.02
CCDC43-205ENST00000592333 PSPNO60542 156 aa15.18■□□□□ 0.02
CCDC43-205ENST00000592333 PEX14O75381 377 aa15.18■□□□□ 0.02
CCDC43-205ENST00000592333 MT-ND2P03891 347 aa15.18■□□□□ 0.02
CCDC43-205ENST00000592333 ATF1P18846 271 aa15.18■□□□□ 0.02
CCDC43-205ENST00000592333 LMO1P25800 156 aa15.18■□□□□ 0.02
CCDC43-205ENST00000592333 RAB13P51153 203 aa15.18■□□□□ 0.02
CCDC43-205ENST00000592333 ARHGDIBP52566 201 aa15.18■□□□□ 0.02
CCDC43-205ENST00000592333 ZNF85Q03923 595 aa15.18■□□□□ 0.02
CCDC43-205ENST00000592333 MEDAGQ5VYS4 303 aa15.18■□□□□ 0.02
CCDC43-205ENST00000592333 AMIGO2Q86SJ2 522 aa15.18■□□□□ 0.02
CCDC43-205ENST00000592333 C11orf44Q8N8P7 122 aa15.18■□□□□ 0.02
CCDC43-205ENST00000592333 OR52N4Q8NGI2 321 aa15.18■□□□□ 0.02
CCDC43-205ENST00000592333 OR2G2Q8NGZ5 317 aa15.18■□□□□ 0.02
CCDC43-205ENST00000592333 CORO2AQ92828 525 aa15.18■□□□□ 0.02
CCDC43-205ENST00000592333 CREB3L1Q96BA8 519 aa15.18■□□□□ 0.02
CCDC43-205ENST00000592333 NEK6Q9HC98 313 aa15.18■□□□□ 0.02
CCDC43-205ENST00000592333 TAS2R3Q9NYW6 316 aa15.18■□□□□ 0.02
CCDC43-205ENST00000592333 OAZ3Q9UMX2 235 aa15.18■□□□□ 0.02
CCDC43-205ENST00000592333 PCDHGB5Q9Y5G0 923 aa15.18■□□□□ 0.02
CCDC43-205ENST00000592333 IGKV1-9A0A0C4DH69 117 aa15.17■□□□□ 0.02
CCDC43-205ENST00000592333 SNTNA6NMZ2 147 aa15.17■□□□□ 0.02
CCDC43-205ENST00000592333 ENTPD6O75354 484 aa15.17■□□□□ 0.02
CCDC43-205ENST00000592333 IGHA1P01876 353 aa15.17■□□□□ 0.02
CCDC43-205ENST00000592333 GABRR1P24046 479 aa15.17■□□□□ 0.02
CCDC43-205ENST00000592333 HTR1DP28221 377 aa15.17■□□□□ 0.02
CCDC43-205ENST00000592333 POLR2IP36954 125 aaKnown RBP15.17■□□□□ 0.02
CCDC43-205ENST00000592333 KIR3DL2P43630 455 aa15.17■□□□□ 0.02
CCDC43-205ENST00000592333 P2RX3P56373 397 aa15.17■□□□□ 0.02
CCDC43-205ENST00000592333 PDZK1IP1Q13113 114 aa15.17■□□□□ 0.02
CCDC43-205ENST00000592333 EDDM3AQ14507 147 aa15.17■□□□□ 0.02
CCDC43-205ENST00000592333 SAXO1Q8IYX7 474 aa15.17■□□□□ 0.02
CCDC43-205ENST00000592333 ZNF596Q8TC21 504 aa15.17■□□□□ 0.02
CCDC43-205ENST00000592333 RNF166Q96A37 237 aaPredicted RBP15.17■□□□□ 0.02
CCDC43-205ENST00000592333 RIBC2Q9H4K1 309 aa15.17■□□□□ 0.02
CCDC43-205ENST00000592333 HMG20AQ9NP66 347 aa15.17■□□□□ 0.02
CCDC43-205ENST00000592333 J3QRE1 110 aa15.16■□□□□ 0.02
CCDC43-205ENST00000592333 ALX3O95076 343 aa15.16■□□□□ 0.02
CCDC43-205ENST00000592333 CSN2P05814 226 aa15.16■□□□□ 0.02
CCDC43-205ENST00000592333 ZNF20P17024 532 aa15.16■□□□□ 0.02
CCDC43-205ENST00000592333 BRS3P32247 399 aa15.16■□□□□ 0.02
CCDC43-205ENST00000592333 NPBWR2P48146 333 aa15.16■□□□□ 0.02
CCDC43-205ENST00000592333 BDH1Q02338 343 aa15.16■□□□□ 0.02
CCDC43-205ENST00000592333 SLC34A1Q06495 639 aa15.16■□□□□ 0.02
CCDC43-205ENST00000592333 TP53I3Q53FA7 332 aa15.16■□□□□ 0.02
CCDC43-205ENST00000592333 HEPN1Q6WQI6 88 aa15.16■□□□□ 0.02
CCDC43-205ENST00000592333 CHST4Q8NCG5 386 aa15.16■□□□□ 0.02
CCDC43-205ENST00000592333 ADAT3Q96EY9 351 aaPredicted RBP15.16■□□□□ 0.02
CCDC43-205ENST00000592333 MRPL48Q96GC5 212 aaKnown RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms