RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 SDSLQ96GA7 329 aa10.06□□□□□ -0.8
APOC1-206ENST00000590334 C1orf159Q96HA4 380 aa10.06□□□□□ -0.8
APOC1-206ENST00000590334 GAL3ST1Q99999 423 aa10.06□□□□□ -0.8
APOC1-206ENST00000590334 CST11Q9H112 138 aa10.06□□□□□ -0.8
APOC1-206ENST00000590334 DCSTAMPQ9H295 470 aa10.06□□□□□ -0.8
APOC1-206ENST00000590334 IFT22Q9H7X7 185 aa10.06□□□□□ -0.8
APOC1-206ENST00000590334 LIN7BQ9HAP6 207 aa10.06□□□□□ -0.8
APOC1-206ENST00000590334 ELL3Q9HB65 397 aaPredicted RBP10.06□□□□□ -0.8
APOC1-206ENST00000590334 PATZ1Q9HBE1 687 aaKnown RBP10.06□□□□□ -0.8
APOC1-206ENST00000590334 IL36RNQ9UBH0 155 aa10.06□□□□□ -0.8
APOC1-206ENST00000590334 MIOXQ9UGB7 285 aa10.06□□□□□ -0.8
APOC1-206ENST00000590334 ZANQ9Y493 2812 aa10.06□□□□□ -0.8
APOC1-206ENST00000590334 DSCAML1Q8TD84 2053 aa10.05□□□□□ -0.8
APOC1-206ENST00000590334 A0A1W2PP11 408 aa10.05□□□□□ -0.8
APOC1-206ENST00000590334 DPPA5A6NC42 116 aa10.05□□□□□ -0.8
APOC1-206ENST00000590334 FAM90A10PA6NDY2 464 aa10.05□□□□□ -0.8
APOC1-206ENST00000590334 FAM90A18PA6NE21 464 aa10.05□□□□□ -0.8
APOC1-206ENST00000590334 FAM90A16PA6NEW6 464 aa10.05□□□□□ -0.8
APOC1-206ENST00000590334 FAM90A20PA6NIJ5 464 aa10.05□□□□□ -0.8
APOC1-206ENST00000590334 FAM90A8PA6NJQ4 464 aa10.05□□□□□ -0.8
APOC1-206ENST00000590334 FAM90A7PA6NKC0 464 aa10.05□□□□□ -0.8
APOC1-206ENST00000590334 RFPL4AA6NLU0 287 aa10.05□□□□□ -0.8
APOC1-206ENST00000590334 FAM90A22PA8MWA6 464 aa10.05□□□□□ -0.8
APOC1-206ENST00000590334 FAM90A12PA8MX19 464 aa10.05□□□□□ -0.8
APOC1-206ENST00000590334 FAM90A5PA8MXJ8 464 aa10.05□□□□□ -0.8
APOC1-206ENST00000590334 FAM90A23PA8MXZ1 464 aa10.05□□□□□ -0.8
APOC1-206ENST00000590334 RNF223E7ERA6 249 aa10.05□□□□□ -0.8
APOC1-206ENST00000590334 RFPL4AL1F8VTS6 287 aa10.05□□□□□ -0.8
APOC1-206ENST00000590334 SH2D1BO14796 132 aa10.05□□□□□ -0.8
APOC1-206ENST00000590334 SIGLEC5O15389 551 aa10.05□□□□□ -0.8
APOC1-206ENST00000590334 NOL3O60936 208 aaKnown RBP10.05□□□□□ -0.8
APOC1-206ENST00000590334 FAM90A15PP0C7V4 464 aa10.05□□□□□ -0.8
APOC1-206ENST00000590334 FAM90A13PP0C7W8 464 aa10.05□□□□□ -0.8
APOC1-206ENST00000590334 FAM90A14PP0C7W9 464 aa10.05□□□□□ -0.8
APOC1-206ENST00000590334 FAM90A24PP0C7X0 464 aa10.05□□□□□ -0.8
APOC1-206ENST00000590334 CALCBP10092 127 aa10.05□□□□□ -0.8
APOC1-206ENST00000590334 SLC2A2P11168 524 aaPredicted RBP10.05□□□□□ -0.8
APOC1-206ENST00000590334 MGMTP16455 207 aa10.05□□□□□ -0.8
APOC1-206ENST00000590334 SERPINA2P20848 420 aa10.05□□□□□ -0.8
APOC1-206ENST00000590334 LMO1P25800 156 aa10.05□□□□□ -0.8
APOC1-206ENST00000590334 PRDX2P32119 198 aa10.05□□□□□ -0.8
APOC1-206ENST00000590334 CLDN12P56749 244 aa10.05□□□□□ -0.8
APOC1-206ENST00000590334 UNC119Q13432 240 aa10.05□□□□□ -0.8
APOC1-206ENST00000590334 SPCS2Q15005 226 aa10.05□□□□□ -0.8
APOC1-206ENST00000590334 C2orf76Q3KRA6 126 aa10.05□□□□□ -0.8
APOC1-206ENST00000590334 LYPD2Q6UXB3 125 aa10.05□□□□□ -0.8
APOC1-206ENST00000590334 ZNF841Q6ZN19 808 aa10.05□□□□□ -0.8
APOC1-206ENST00000590334 ZNF561Q8N587 486 aa10.05□□□□□ -0.8
APOC1-206ENST00000590334 CD177Q8N6Q3 437 aa10.05□□□□□ -0.8
APOC1-206ENST00000590334 PTX4Q96A99 478 aa10.05□□□□□ -0.8
APOC1-206ENST00000590334 RAB39BQ96DA2 213 aa10.05□□□□□ -0.8
APOC1-206ENST00000590334 NEIL1Q96FI4 390 aaPredicted RBP10.05□□□□□ -0.8
APOC1-206ENST00000590334 MED30Q96HR3 178 aa10.05□□□□□ -0.8
APOC1-206ENST00000590334 Q96M66 194 aa10.05□□□□□ -0.8
APOC1-206ENST00000590334 GAFA1Q96PS6 74 aa10.05□□□□□ -0.8
APOC1-206ENST00000590334 MRI1Q9BV20 369 aa10.05□□□□□ -0.8
APOC1-206ENST00000590334 BARHL1Q9BZE3 327 aa10.05□□□□□ -0.8
APOC1-206ENST00000590334 ZNF665Q9H7R5 613 aa10.05□□□□□ -0.8
APOC1-206ENST00000590334 CTSZQ9UBR2 303 aa10.05□□□□□ -0.8
APOC1-206ENST00000590334 GLS2Q9UI32 602 aa10.05□□□□□ -0.8
APOC1-206ENST00000590334 DAPK2Q9UIK4 370 aa10.05□□□□□ -0.8
APOC1-206ENST00000590334 ST3GAL6Q9Y274 331 aa10.05□□□□□ -0.8
APOC1-206ENST00000590334 DOCK11Q5JSL3 2073 aa10.05□□□□□ -0.8
APOC1-206ENST00000590334 NKX6-3A6NJ46 265 aa10.04□□□□□ -0.8
APOC1-206ENST00000590334 ADAM20O43506 726 aa10.04□□□□□ -0.8
APOC1-206ENST00000590334 FCN3O75636 299 aa10.04□□□□□ -0.8
APOC1-206ENST00000590334 CRTAPO75718 401 aaPredicted RBP10.04□□□□□ -0.8
APOC1-206ENST00000590334 HAND1O96004 215 aa10.04□□□□□ -0.8
APOC1-206ENST00000590334 CHRM2P08172 466 aa10.04□□□□□ -0.8
APOC1-206ENST00000590334 RPS2P15880 293 aaKnown RBP10.04□□□□□ -0.8
APOC1-206ENST00000590334 RAB6AP20340 208 aa10.04□□□□□ -0.8
APOC1-206ENST00000590334 RPS27AP62979 156 aaKnown RBP10.04□□□□□ -0.8
APOC1-206ENST00000590334 IL13RA1P78552 427 aa10.04□□□□□ -0.8
APOC1-206ENST00000590334 MPV17LQ2QL34 196 aa10.04□□□□□ -0.8
APOC1-206ENST00000590334 PIGYQ3MUY2 71 aa10.04□□□□□ -0.8
APOC1-206ENST00000590334 Q6P435 159 aa10.04□□□□□ -0.8
APOC1-206ENST00000590334 SLC36A1Q7Z2H8 476 aa10.04□□□□□ -0.8
APOC1-206ENST00000590334 CHST4Q8NCG5 386 aa10.04□□□□□ -0.8
APOC1-206ENST00000590334 DYNC2LI1Q8TCX1 351 aa10.04□□□□□ -0.8
APOC1-206ENST00000590334 KCTD12Q96CX2 325 aaKnown RBP10.04□□□□□ -0.8
APOC1-206ENST00000590334 CCL13Q99616 98 aa10.04□□□□□ -0.8
APOC1-206ENST00000590334 TM2D1Q9BX74 207 aa10.04□□□□□ -0.8
APOC1-206ENST00000590334 BANF2Q9H503 90 aa10.04□□□□□ -0.8
APOC1-206ENST00000590334 NARFLQ9H6Q4 476 aa10.04□□□□□ -0.8
APOC1-206ENST00000590334 OR14J1Q9UGF5 321 aa10.04□□□□□ -0.8
APOC1-206ENST00000590334 OR5V1Q9UGF6 321 aa10.04□□□□□ -0.8
APOC1-206ENST00000590334 RSL24D1Q9UHA3 163 aaKnown RBP10.04□□□□□ -0.8
APOC1-206ENST00000590334 RAB22AQ9UL26 194 aa10.04□□□□□ -0.8
APOC1-206ENST00000590334 PCDHB10Q9UN67 800 aa10.04□□□□□ -0.8
APOC1-206ENST00000590334 MYO9AB2RTY4 2548 aa10.04□□□□□ -0.8
APOC1-206ENST00000590334 ABCA2Q9BZC7 2435 aa10.04□□□□□ -0.8
APOC1-206ENST00000590334 A0A0B4J203 849 aa10.03□□□□□ -0.8
APOC1-206ENST00000590334 TMEM272A0A1B0GTI8 110 aa10.03□□□□□ -0.8
APOC1-206ENST00000590334 GEMIN2O14893 280 aaKnown RBP10.03□□□□□ -0.8
APOC1-206ENST00000590334 TMPRSS2O15393 492 aa10.03□□□□□ -0.8
APOC1-206ENST00000590334 ZNF737O75373 536 aa10.03□□□□□ -0.8
APOC1-206ENST00000590334 TFF1P04155 84 aa10.03□□□□□ -0.8
APOC1-206ENST00000590334 HEXAP06865 529 aa10.03□□□□□ -0.8
APOC1-206ENST00000590334 FLNAP21333 2647 aaKnown RBP10.03□□□□□ -0.8
APOC1-206ENST00000590334 DUSP1P28562 367 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms