RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 SLC25A26Q70HW3 274 aa14.68□□□□□ -0.06
CCDC43-204ENST00000588687 CATSPERDQ86XM0 798 aa14.68□□□□□ -0.06
CCDC43-204ENST00000588687 DNAJC9Q8WXX5 260 aa14.68□□□□□ -0.06
CCDC43-204ENST00000588687 TEX12Q9BXU0 123 aa14.68□□□□□ -0.06
CCDC43-204ENST00000588687 PAPOLBQ9NRJ5 636 aaKnown RBP14.68□□□□□ -0.06
CCDC43-204ENST00000588687 RBFOX1Q9NWB1 397 aaKnown RBP14.68□□□□□ -0.06
CCDC43-204ENST00000588687 STAB2Q8WWQ8 2551 aa14.68□□□□□ -0.06
CCDC43-204ENST00000588687 PF4P02776 101 aa14.67□□□□□ -0.06
CCDC43-204ENST00000588687 HTR1DP28221 377 aa14.67□□□□□ -0.06
CCDC43-204ENST00000588687 EPHA2P29317 976 aa14.67□□□□□ -0.06
CCDC43-204ENST00000588687 OR3A1P47881 315 aa14.67□□□□□ -0.06
CCDC43-204ENST00000588687 NPBWR2P48146 333 aa14.67□□□□□ -0.06
CCDC43-204ENST00000588687 DAPP51397 102 aa14.67□□□□□ -0.06
CCDC43-204ENST00000588687 BDH1Q02338 343 aa14.67□□□□□ -0.06
CCDC43-204ENST00000588687 ZNF146Q15072 292 aa14.67□□□□□ -0.06
CCDC43-204ENST00000588687 GRK1Q15835 563 aa14.67□□□□□ -0.06
CCDC43-204ENST00000588687 NXNL2Q5VZ03 156 aa14.67□□□□□ -0.06
CCDC43-204ENST00000588687 LINC00482Q8N8I6 264 aa14.67□□□□□ -0.06
CCDC43-204ENST00000588687 EMG1Q92979 244 aaKnown RBP14.67□□□□□ -0.06
CCDC43-204ENST00000588687 HHLA2Q9UM44 414 aa14.67□□□□□ -0.06
CCDC43-204ENST00000588687 DYNC2H1Q8NCM8 4307 aaKnown RBP14.66□□□□□ -0.06
CCDC43-204ENST00000588687 TRBV2A0A0J9YWF9 115 aa14.66□□□□□ -0.06
CCDC43-204ENST00000588687 TCRBV4S1A1TA0A5B7 111 aa14.66□□□□□ -0.06
CCDC43-204ENST00000588687 ZNF670-ZNF695F2Z2N8 137 aa14.66□□□□□ -0.06
CCDC43-204ENST00000588687 H3BSH0 61 aa14.66□□□□□ -0.06
CCDC43-204ENST00000588687 ATP8B1O43520 1251 aa14.66□□□□□ -0.06
CCDC43-204ENST00000588687 FKBP6O75344 327 aa14.66□□□□□ -0.06
CCDC43-204ENST00000588687 ENTPD6O75354 484 aa14.66□□□□□ -0.06
CCDC43-204ENST00000588687 OR2F2O95006 317 aa14.66□□□□□ -0.06
CCDC43-204ENST00000588687 LPLP06858 475 aa14.66□□□□□ -0.06
CCDC43-204ENST00000588687 HOXB6P17509 224 aaKnown RBP14.66□□□□□ -0.06
CCDC43-204ENST00000588687 ERP29P30040 261 aaKnown RBP14.66□□□□□ -0.06
CCDC43-204ENST00000588687 GDNFP39905 211 aa14.66□□□□□ -0.06
CCDC43-204ENST00000588687 P2RX3P56373 397 aa14.66□□□□□ -0.06
CCDC43-204ENST00000588687 CBX1P83916 185 aa14.66□□□□□ -0.06
CCDC43-204ENST00000588687 IL18R1Q13478 541 aa14.66□□□□□ -0.06
CCDC43-204ENST00000588687 ODF4Q2M2E3 257 aa14.66□□□□□ -0.06
CCDC43-204ENST00000588687 ABCA11PQ4W5N1 156 aa14.66□□□□□ -0.06
CCDC43-204ENST00000588687 PRAMEF5Q5TYX0 476 aa14.66□□□□□ -0.06
CCDC43-204ENST00000588687 ZBTB49Q6ZSB9 765 aa14.66□□□□□ -0.06
CCDC43-204ENST00000588687 RNF166Q96A37 237 aaPredicted RBP14.66□□□□□ -0.06
CCDC43-204ENST00000588687 SLC25A33Q9BSK2 321 aa14.66□□□□□ -0.06
CCDC43-204ENST00000588687 PLEKHA1Q9HB21 404 aa14.66□□□□□ -0.06
CCDC43-204ENST00000588687 DPM3Q9P2X0 92 aa14.66□□□□□ -0.06
CCDC43-204ENST00000588687 SLC7A11Q9UPY5 501 aa14.66□□□□□ -0.06
CCDC43-204ENST00000588687 KIAA2026Q5HYC2 2103 aa14.66□□□□□ -0.06
CCDC43-204ENST00000588687 TCRBV3S1A0A5B6 114 aa14.65□□□□□ -0.06
CCDC43-204ENST00000588687 SH2D7A6NKC9 451 aaPredicted RBP14.65□□□□□ -0.06
CCDC43-204ENST00000588687 INMTO95050 263 aa14.65□□□□□ -0.06
CCDC43-204ENST00000588687 DUS4LO95620 317 aaKnown RBP14.65□□□□□ -0.06
CCDC43-204ENST00000588687 GABRR1P24046 479 aa14.65□□□□□ -0.06
CCDC43-204ENST00000588687 PEX2P28328 305 aa14.65□□□□□ -0.06
CCDC43-204ENST00000588687 DUSP1P28562 367 aa14.65□□□□□ -0.06
CCDC43-204ENST00000588687 CD34P28906 385 aa14.65□□□□□ -0.06
CCDC43-204ENST00000588687 HOXD3P31249 432 aaPredicted RBP14.65□□□□□ -0.06
CCDC43-204ENST00000588687 FUT6P51993 359 aa14.65□□□□□ -0.06
CCDC43-204ENST00000588687 UTF1Q5T230 341 aa14.65□□□□□ -0.06
CCDC43-204ENST00000588687 SLX4IPQ5VYV7 408 aa14.65□□□□□ -0.06
CCDC43-204ENST00000588687 C12orf73Q69YU5 71 aa14.65□□□□□ -0.06
CCDC43-204ENST00000588687 CENPVQ7Z7K6 275 aaPredicted RBP14.65□□□□□ -0.06
CCDC43-204ENST00000588687 EGFL6Q8IUX8 553 aa14.65□□□□□ -0.06
CCDC43-204ENST00000588687 TMEM163Q8TC26 289 aa14.65□□□□□ -0.06
CCDC43-204ENST00000588687 NRBF2Q96F24 287 aa14.65□□□□□ -0.06
CCDC43-204ENST00000588687 RBM14Q96PK6 669 aaKnown RBP14.65□□□□□ -0.06
CCDC43-204ENST00000588687 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.65□□□□□ -0.06
CCDC43-204ENST00000588687 UBE2J1Q9Y385 318 aaPredicted RBP14.65□□□□□ -0.06
CCDC43-204ENST00000588687 DNAH7Q8WXX0 4024 aa14.65□□□□□ -0.06
CCDC43-204ENST00000588687 HUWE1Q7Z6Z7 4374 aaKnown RBP14.65□□□□□ -0.06
CCDC43-204ENST00000588687 RYR2Q92736 4967 aa14.64□□□□□ -0.07
CCDC43-204ENST00000588687 IGKV1-9A0A0C4DH69 117 aa14.64□□□□□ -0.07
CCDC43-204ENST00000588687 ZAR1LA6NP61 321 aa14.64□□□□□ -0.07
CCDC43-204ENST00000588687 MGST3O14880 152 aa14.64□□□□□ -0.07
CCDC43-204ENST00000588687 SYT7O43581 403 aa14.64□□□□□ -0.07
CCDC43-204ENST00000588687 MITFO75030 526 aaPredicted RBP14.64□□□□□ -0.07
CCDC43-204ENST00000588687 GATBO75879 557 aaKnown RBP14.64□□□□□ -0.07
CCDC43-204ENST00000588687 RPP14O95059 124 aaKnown RBP14.64□□□□□ -0.07
CCDC43-204ENST00000588687 VSIG8P0DPA2 414 aa14.64□□□□□ -0.07
CCDC43-204ENST00000588687 BCL3P20749 454 aa14.64□□□□□ -0.07
CCDC43-204ENST00000588687 ACTR3P61158 418 aa14.64□□□□□ -0.07
CCDC43-204ENST00000588687 ISL1P61371 349 aa14.64□□□□□ -0.07
CCDC43-204ENST00000588687 HEPN1Q6WQI6 88 aa14.64□□□□□ -0.07
CCDC43-204ENST00000588687 Q8IYB0 196 aa14.64□□□□□ -0.07
CCDC43-204ENST00000588687 ABHD12Q8N2K0 398 aa14.64□□□□□ -0.07
CCDC43-204ENST00000588687 PRSS35Q8N3Z0 413 aa14.64□□□□□ -0.07
CCDC43-204ENST00000588687 TCEANCQ8N8B7 351 aa14.64□□□□□ -0.07
CCDC43-204ENST00000588687 OR4X2Q8NGF9 303 aa14.64□□□□□ -0.07
CCDC43-204ENST00000588687 AKR1E2Q96JD6 320 aa14.64□□□□□ -0.07
CCDC43-204ENST00000588687 THTPAQ9BU02 230 aa14.64□□□□□ -0.07
CCDC43-204ENST00000588687 ZNF286AQ9HBT8 521 aa14.64□□□□□ -0.07
CCDC43-204ENST00000588687 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.64□□□□□ -0.07
CCDC43-204ENST00000588687 LOC107986453A0A1B0GWG9 222 aa14.63□□□□□ -0.07
CCDC43-204ENST00000588687 A0A1W2PQL4 384 aaPredicted RBP14.63□□□□□ -0.07
CCDC43-204ENST00000588687 FAM172BPA6NC97 362 aa14.63□□□□□ -0.07
CCDC43-204ENST00000588687 LY6LH3BQJ8 138 aa14.63□□□□□ -0.07
CCDC43-204ENST00000588687 SPIN3Q5JUX0 258 aa14.63□□□□□ -0.07
CCDC43-204ENST00000588687 ENTHD1Q8IYW4 607 aa14.63□□□□□ -0.07
CCDC43-204ENST00000588687 FAM58AQ8N1B3 248 aa14.63□□□□□ -0.07
CCDC43-204ENST00000588687 OSR2Q8N2R0 312 aa14.63□□□□□ -0.07
CCDC43-204ENST00000588687 DNAAF1Q8NEP3 725 aa14.63□□□□□ -0.07
CCDC43-204ENST00000588687 UTP4Q969X6 686 aaKnown RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms