RNA–Protein interactions for RNA: ENST00000588617.1

VMP1-208, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 884 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-208ENST00000588617 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.03□□□□□ -1.6
VMP1-208ENST00000588617 IGHV7-4-1A0A0J9YVY3 117 aa5.03□□□□□ -1.6
VMP1-208ENST00000588617 CENPBD1B2RD01 187 aa5.03□□□□□ -1.6
VMP1-208ENST00000588617 PLIN3O60664 434 aa5.03□□□□□ -1.6
VMP1-208ENST00000588617 ME2P23368 584 aa5.03□□□□□ -1.6
VMP1-208ENST00000588617 GRPRP30550 384 aa5.03□□□□□ -1.6
VMP1-208ENST00000588617 KRTAP10-6P60371 365 aaPredicted RBP5.03□□□□□ -1.6
VMP1-208ENST00000588617 Q499Y3 187 aa5.03□□□□□ -1.6
VMP1-208ENST00000588617 LCE1FQ5T754 118 aa5.03□□□□□ -1.6
VMP1-208ENST00000588617 TMEM156Q8N614 296 aa5.03□□□□□ -1.6
VMP1-208ENST00000588617 CCL17Q92583 94 aa5.03□□□□□ -1.6
VMP1-208ENST00000588617 RBMXL1Q96E39 390 aaKnown RBP5.03□□□□□ -1.6
VMP1-208ENST00000588617 NDFIP1Q9BT67 221 aa5.03□□□□□ -1.6
VMP1-208ENST00000588617 ASB7Q9H672 318 aa5.03□□□□□ -1.6
VMP1-208ENST00000588617 ASB8Q9H765 288 aa5.03□□□□□ -1.6
VMP1-208ENST00000588617 ZNF355PQ9NSJ1 428 aa5.03□□□□□ -1.6
VMP1-208ENST00000588617 PRR34Q9NV39 138 aa5.03□□□□□ -1.6
VMP1-208ENST00000588617 ZNF223Q9UK11 482 aaPredicted RBP5.03□□□□□ -1.6
VMP1-208ENST00000588617 AGRNO00468 2067 aa5.03□□□□□ -1.6
VMP1-208ENST00000588617 LRP4O75096 1905 aa5.02□□□□□ -1.61
VMP1-208ENST00000588617 LOC102724200A0A096LPH7 203 aaPredicted RBP5.02□□□□□ -1.61
VMP1-208ENST00000588617 F5H5K5 113 aa5.02□□□□□ -1.61
VMP1-208ENST00000588617 H3BP45 60 aa5.02□□□□□ -1.61
VMP1-208ENST00000588617 GPR171O14626 319 aa5.02□□□□□ -1.61
VMP1-208ENST00000588617 CYTH3O43739 400 aa5.02□□□□□ -1.61
VMP1-208ENST00000588617 OR2A4O95047 310 aa5.02□□□□□ -1.61
VMP1-208ENST00000588617 IGLV3-25P01717 112 aa5.02□□□□□ -1.61
VMP1-208ENST00000588617 SLC2A1P11166 492 aa5.02□□□□□ -1.61
VMP1-208ENST00000588617 SPNP16150 400 aa5.02□□□□□ -1.61
VMP1-208ENST00000588617 HIST1H1CP16403 213 aaKnown RBP5.02□□□□□ -1.61
VMP1-208ENST00000588617 ATF1P18846 271 aa5.02□□□□□ -1.61
VMP1-208ENST00000588617 TAF6P49848 677 aa5.02□□□□□ -1.61
VMP1-208ENST00000588617 RAB25P57735 213 aa5.02□□□□□ -1.61
VMP1-208ENST00000588617 ZNF404Q494X3 552 aa5.02□□□□□ -1.61
VMP1-208ENST00000588617 SLC36A2Q495M3 483 aa5.02□□□□□ -1.61
VMP1-208ENST00000588617 DNAL1Q4LDG9 190 aa5.02□□□□□ -1.61
VMP1-208ENST00000588617 TEX30Q5JUR7 227 aa5.02□□□□□ -1.61
VMP1-208ENST00000588617 KCTD16Q68DU8 428 aa5.02□□□□□ -1.61
VMP1-208ENST00000588617 FAM231DQ6ZW35 169 aa5.02□□□□□ -1.61
VMP1-208ENST00000588617 SLC13A5Q86YT5 568 aaPredicted RBP5.02□□□□□ -1.61
VMP1-208ENST00000588617 SYNPRQ8TBG9 265 aa5.02□□□□□ -1.61
VMP1-208ENST00000588617 ITFG2Q969R8 447 aa5.02□□□□□ -1.61
VMP1-208ENST00000588617 RBP7Q96R05 134 aa5.02□□□□□ -1.61
VMP1-208ENST00000588617 OR2A7Q96R45 310 aa5.02□□□□□ -1.61
VMP1-208ENST00000588617 ZNF649Q9BS31 505 aa5.02□□□□□ -1.61
VMP1-208ENST00000588617 UCK1Q9HA47 277 aa5.02□□□□□ -1.61
VMP1-208ENST00000588617 TRAV8-2A0A0B4J237 113 aa5.01□□□□□ -1.61
VMP1-208ENST00000588617 PHYHO14832 338 aa5.01□□□□□ -1.61
VMP1-208ENST00000588617 SCO1O75880 301 aa5.01□□□□□ -1.61
VMP1-208ENST00000588617 KRTAP10-7P60409 375 aaPredicted RBP5.01□□□□□ -1.61
VMP1-208ENST00000588617 DGAT2L6Q6ZPD8 337 aa5.01□□□□□ -1.61
VMP1-208ENST00000588617 DCXRQ7Z4W1 244 aa5.01□□□□□ -1.61
VMP1-208ENST00000588617 LINC01551Q86U37 167 aa5.01□□□□□ -1.61
VMP1-208ENST00000588617 C2orf73Q8N5S3 287 aaPredicted RBP5.01□□□□□ -1.61
VMP1-208ENST00000588617 CYB561D1Q8N8Q1 229 aa5.01□□□□□ -1.61
VMP1-208ENST00000588617 SLC25A29Q8N8R3 303 aa5.01□□□□□ -1.61
VMP1-208ENST00000588617 OR5T1Q8NG75 326 aa5.01□□□□□ -1.61
VMP1-208ENST00000588617 OR8J2Q8NGG1 315 aa5.01□□□□□ -1.61
VMP1-208ENST00000588617 OR5M1Q8NGP8 315 aa5.01□□□□□ -1.61
VMP1-208ENST00000588617 OR6K3Q8NGY3 331 aa5.01□□□□□ -1.61
VMP1-208ENST00000588617 ZNF420Q8TAQ5 688 aaPredicted RBP5.01□□□□□ -1.61
VMP1-208ENST00000588617 CPNE4Q96A23 557 aaPredicted RBP5.01□□□□□ -1.61
VMP1-208ENST00000588617 PARD6GQ9BYG4 376 aaPredicted RBP5.01□□□□□ -1.61
VMP1-208ENST00000588617 CA10Q9NS85 328 aa5.01□□□□□ -1.61
VMP1-208ENST00000588617 TBX21Q9UL17 535 aa5.01□□□□□ -1.61
VMP1-208ENST00000588617 TSPOAP1O95153 1857 aa5□□□□□ -1.61
VMP1-208ENST00000588617 TMEM72A0PK05 275 aa5□□□□□ -1.61
VMP1-208ENST00000588617 PGPA6NDG6 321 aa5□□□□□ -1.61
VMP1-208ENST00000588617 PDCD6O75340 191 aa5□□□□□ -1.61
VMP1-208ENST00000588617 MAGP20916 626 aa5□□□□□ -1.61
VMP1-208ENST00000588617 MEF2CQ06413 473 aaPredicted RBP5□□□□□ -1.61
VMP1-208ENST00000588617 TBC1D28Q2M2D7 210 aa5□□□□□ -1.61
VMP1-208ENST00000588617 UBE2NLQ5JXB2 153 aa5□□□□□ -1.61
VMP1-208ENST00000588617 CLLU1OSQ5K130 101 aa5□□□□□ -1.61
VMP1-208ENST00000588617 GALNT10Q86SR1 603 aa5□□□□□ -1.61
VMP1-208ENST00000588617 WDR86Q86TI4 376 aa5□□□□□ -1.61
VMP1-208ENST00000588617 ZNF786Q8N393 782 aa5□□□□□ -1.61
VMP1-208ENST00000588617 CIRBP-AS1Q8TBR5 109 aa5□□□□□ -1.61
VMP1-208ENST00000588617 TBL1YQ9BQ87 522 aa5□□□□□ -1.61
VMP1-208ENST00000588617 FBXL15Q9H469 300 aa5□□□□□ -1.61
VMP1-208ENST00000588617 RBM12B-AS1Q9P1G2 102 aa5□□□□□ -1.61
VMP1-208ENST00000588617 ENOPH1Q9UHY7 261 aa5□□□□□ -1.61
VMP1-208ENST00000588617 POLR3HQ9Y535 204 aaPredicted RBP5□□□□□ -1.61
VMP1-208ENST00000588617 ZNF780BQ9Y6R6 833 aa5□□□□□ -1.61
VMP1-208ENST00000588617 ARHGAP21Q5T5U3 1957 aa5□□□□□ -1.61
VMP1-208ENST00000588617 SIGLEC1Q9BZZ2 1709 aa5□□□□□ -1.61
VMP1-208ENST00000588617 IGHV3-49A0A0A0MS15 119 aa4.99□□□□□ -1.61
VMP1-208ENST00000588617 CEACAM18A8MTB9 384 aa4.99□□□□□ -1.61
VMP1-208ENST00000588617 F5H768 121 aa4.99□□□□□ -1.61
VMP1-208ENST00000588617 CCRL2O00421 344 aa4.99□□□□□ -1.61
VMP1-208ENST00000588617 CTDNEP1O95476 244 aa4.99□□□□□ -1.61
VMP1-208ENST00000588617 MRPL3P09001 348 aaKnown RBP4.99□□□□□ -1.61
VMP1-208ENST00000588617 AKR1C4P17516 323 aa4.99□□□□□ -1.61
VMP1-208ENST00000588617 PRTN3P24158 256 aa4.99□□□□□ -1.61
VMP1-208ENST00000588617 RCVRNP35243 200 aa4.99□□□□□ -1.61
VMP1-208ENST00000588617 CXCL12P48061 93 aa4.99□□□□□ -1.61
VMP1-208ENST00000588617 ZNF133P52736 654 aaPredicted RBP4.99□□□□□ -1.61
VMP1-208ENST00000588617 MAGOHP61326 146 aaKnown RBP4.99□□□□□ -1.61
VMP1-208ENST00000588617 DYNLL1P63167 89 aaKnown RBP4.99□□□□□ -1.61
VMP1-208ENST00000588617 MRPS15P82914 257 aaKnown RBP4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms