RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 CRIP3Q6Q6R5 217 aa12.66□□□□□ -0.38
CCDC43-203ENST00000588210 ITLN2Q8WWU7 325 aaPredicted RBP12.66□□□□□ -0.38
CCDC43-203ENST00000588210 PGAM5Q96HS1 289 aa12.66□□□□□ -0.38
CCDC43-203ENST00000588210 ZNF845Q96IR2 970 aaPredicted RBP12.66□□□□□ -0.38
CCDC43-203ENST00000588210 ZNF416Q9BWM5 594 aa12.66□□□□□ -0.38
CCDC43-203ENST00000588210 A0A0G2JNJ9 132 aa12.65□□□□□ -0.38
CCDC43-203ENST00000588210 SLC22A20A6NK97 555 aa12.65□□□□□ -0.38
CCDC43-203ENST00000588210 KLK2P20151 261 aa12.65□□□□□ -0.38
CCDC43-203ENST00000588210 KISS1Q15726 138 aa12.65□□□□□ -0.38
CCDC43-203ENST00000588210 ANKRD55Q3KP44 614 aa12.65□□□□□ -0.38
CCDC43-203ENST00000588210 PABPC1L2AQ5JQF8 200 aa12.65□□□□□ -0.38
CCDC43-203ENST00000588210 C10orf128Q5T292 105 aa12.65□□□□□ -0.38
CCDC43-203ENST00000588210 FOXL2NBQ6ZUU3 175 aa12.65□□□□□ -0.38
CCDC43-203ENST00000588210 P4HA3Q7Z4N8 544 aa12.65□□□□□ -0.38
CCDC43-203ENST00000588210 RNF141Q8WVD5 230 aa12.65□□□□□ -0.38
CCDC43-203ENST00000588210 ARL11Q969Q4 196 aa12.65□□□□□ -0.38
CCDC43-203ENST00000588210 CPNE4Q96A23 557 aaPredicted RBP12.65□□□□□ -0.38
CCDC43-203ENST00000588210 CYYR1Q96J86 154 aa12.65□□□□□ -0.38
CCDC43-203ENST00000588210 LYZL4Q96KX0 146 aa12.65□□□□□ -0.38
CCDC43-203ENST00000588210 AQP10Q96PS8 301 aa12.65□□□□□ -0.38
CCDC43-203ENST00000588210 TM2D1Q9BX74 207 aa12.65□□□□□ -0.38
CCDC43-203ENST00000588210 Q9UFV3 132 aa12.65□□□□□ -0.38
CCDC43-203ENST00000588210 MCTS1Q9ULC4 181 aaKnown RBP12.65□□□□□ -0.38
CCDC43-203ENST00000588210 V9GYS6 101 aa12.65□□□□□ -0.38
CCDC43-203ENST00000588210 DIDO1Q9BTC0 2240 aaKnown RBP12.65□□□□□ -0.38
CCDC43-203ENST00000588210 GCN1Q92616 2671 aaKnown RBP12.65□□□□□ -0.38
CCDC43-203ENST00000588210 A0A0U1RQV5 110 aa12.65□□□□□ -0.39
CCDC43-203ENST00000588210 CXCL13O43927 109 aa12.65□□□□□ -0.39
CCDC43-203ENST00000588210 CA11O75493 328 aa12.65□□□□□ -0.39
CCDC43-203ENST00000588210 ADAP1O75689 374 aa12.65□□□□□ -0.39
CCDC43-203ENST00000588210 RNF224P0DH78 156 aa12.65□□□□□ -0.39
CCDC43-203ENST00000588210 FCGR2AP12318 317 aa12.65□□□□□ -0.39
CCDC43-203ENST00000588210 RPS2P15880 293 aaKnown RBP12.65□□□□□ -0.39
CCDC43-203ENST00000588210 MSR1P21757 451 aa12.65□□□□□ -0.39
CCDC43-203ENST00000588210 CHRNB4P30926 498 aa12.65□□□□□ -0.39
CCDC43-203ENST00000588210 PTGFRP43088 359 aa12.65□□□□□ -0.39
CCDC43-203ENST00000588210 ZNF133P52736 654 aaPredicted RBP12.65□□□□□ -0.39
CCDC43-203ENST00000588210 CLDN17P56750 224 aa12.65□□□□□ -0.39
CCDC43-203ENST00000588210 RAC3P60763 192 aa12.65□□□□□ -0.39
CCDC43-203ENST00000588210 SURF2Q15527 256 aaPredicted RBP12.65□□□□□ -0.39
CCDC43-203ENST00000588210 Q6ZSR3 168 aa12.65□□□□□ -0.39
CCDC43-203ENST00000588210 C9orf106Q8NAJ2 232 aa12.65□□□□□ -0.39
CCDC43-203ENST00000588210 OR51T1Q8NGJ9 327 aa12.65□□□□□ -0.39
CCDC43-203ENST00000588210 ROBO4Q8WZ75 1007 aa12.65□□□□□ -0.39
CCDC43-203ENST00000588210 PURGQ9UJV8 347 aaKnown RBP12.65□□□□□ -0.39
CCDC43-203ENST00000588210 TENM4Q6N022 2769 aa12.65□□□□□ -0.39
CCDC43-203ENST00000588210 DHRS3O75911 302 aa12.64□□□□□ -0.39
CCDC43-203ENST00000588210 SYNGR4O95473 234 aa12.64□□□□□ -0.39
CCDC43-203ENST00000588210 OR3A2P47893 321 aa12.64□□□□□ -0.39
CCDC43-203ENST00000588210 SNU13P55769 128 aaKnown RBP12.64□□□□□ -0.39
CCDC43-203ENST00000588210 CSNK2A1P68400 391 aaPredicted RBP12.64□□□□□ -0.39
CCDC43-203ENST00000588210 ARL6IP1Q15041 203 aa12.64□□□□□ -0.39
CCDC43-203ENST00000588210 OR2A2Q6IF42 318 aa12.64□□□□□ -0.39
CCDC43-203ENST00000588210 DRAM2Q6UX65 266 aa12.64□□□□□ -0.39
CCDC43-203ENST00000588210 SLC16A14Q7RTX9 510 aa12.64□□□□□ -0.39
CCDC43-203ENST00000588210 POC1AQ8NBT0 407 aa12.64□□□□□ -0.39
CCDC43-203ENST00000588210 FNDC9Q8TBE3 224 aa12.64□□□□□ -0.39
CCDC43-203ENST00000588210 TMEM54Q969K7 222 aa12.64□□□□□ -0.39
CCDC43-203ENST00000588210 C2orf50Q96LR7 162 aa12.64□□□□□ -0.39
CCDC43-203ENST00000588210 TSNAXQ99598 290 aaKnown RBP12.64□□□□□ -0.39
CCDC43-203ENST00000588210 PRRG4Q9BZD6 226 aa12.64□□□□□ -0.39
CCDC43-203ENST00000588210 NELFAQ9H3P2 528 aa12.64□□□□□ -0.39
CCDC43-203ENST00000588210 PCDHB16Q9NRJ7 776 aa12.64□□□□□ -0.39
CCDC43-203ENST00000588210 OR5AC2Q9NZP5 309 aa12.64□□□□□ -0.39
CCDC43-203ENST00000588210 DNAJB11Q9UBS4 358 aa12.64□□□□□ -0.39
CCDC43-203ENST00000588210 C5orf63A6NC05 138 aa12.63□□□□□ -0.39
CCDC43-203ENST00000588210 MSGN1A6NI15 193 aa12.63□□□□□ -0.39
CCDC43-203ENST00000588210 SERPINE3A8MV23 424 aa12.63□□□□□ -0.39
CCDC43-203ENST00000588210 PLATP00750 562 aa12.63□□□□□ -0.39
CCDC43-203ENST00000588210 PET100P0DJ07 73 aa12.63□□□□□ -0.39
CCDC43-203ENST00000588210 ADCYAP1P18509 176 aa12.63□□□□□ -0.39
CCDC43-203ENST00000588210 IL32P24001 234 aa12.63□□□□□ -0.39
CCDC43-203ENST00000588210 CSNK1A1P48729 337 aa12.63□□□□□ -0.39
CCDC43-203ENST00000588210 PPA1Q15181 289 aa12.63□□□□□ -0.39
CCDC43-203ENST00000588210 NKAPLQ5M9Q1 402 aa12.63□□□□□ -0.39
CCDC43-203ENST00000588210 C10orf91Q5T1B1 145 aa12.63□□□□□ -0.39
CCDC43-203ENST00000588210 PLXDC2Q6UX71 529 aa12.63□□□□□ -0.39
CCDC43-203ENST00000588210 SVBPQ8N300 66 aa12.63□□□□□ -0.39
CCDC43-203ENST00000588210 BOLLQ8N9W6 283 aaKnown RBP12.63□□□□□ -0.39
CCDC43-203ENST00000588210 NAXEQ8NCW5 288 aa12.63□□□□□ -0.39
CCDC43-203ENST00000588210 CCDC54Q8NEL0 328 aa12.63□□□□□ -0.39
CCDC43-203ENST00000588210 CSNK2A3Q8NEV1 391 aa12.63□□□□□ -0.39
CCDC43-203ENST00000588210 GJC3Q8NFK1 279 aa12.63□□□□□ -0.39
CCDC43-203ENST00000588210 CA5BP1Q8WTZ4 195 aa12.63□□□□□ -0.39
CCDC43-203ENST00000588210 PP6455Q8WZ26 134 aa12.63□□□□□ -0.39
CCDC43-203ENST00000588210 EMG1Q92979 244 aaKnown RBP12.63□□□□□ -0.39
CCDC43-203ENST00000588210 PECRQ9BY49 303 aa12.63□□□□□ -0.39
CCDC43-203ENST00000588210 CHST5Q9GZS9 411 aa12.63□□□□□ -0.39
CCDC43-203ENST00000588210 RNF122Q9H9V4 155 aa12.63□□□□□ -0.39
CCDC43-203ENST00000588210 MMP26Q9NRE1 261 aa12.63□□□□□ -0.39
CCDC43-203ENST00000588210 EHFQ9NZC4 300 aa12.63□□□□□ -0.39
CCDC43-203ENST00000588210 ZNF629Q9UEG4 869 aaPredicted RBP12.63□□□□□ -0.39
CCDC43-203ENST00000588210 FLNCQ14315 2725 aa12.63□□□□□ -0.39
CCDC43-203ENST00000588210 PI3P19957 117 aa12.63□□□□□ -0.39
CCDC43-203ENST00000588210 HIST1H3AP68431 136 aa12.63□□□□□ -0.39
CCDC43-203ENST00000588210 H3F3AP84243 136 aa12.63□□□□□ -0.39
CCDC43-203ENST00000588210 IL15RAQ13261 267 aa12.63□□□□□ -0.39
CCDC43-203ENST00000588210 ENDOGQ14249 297 aaKnown RBP12.63□□□□□ -0.39
CCDC43-203ENST00000588210 HIST2H3PS2Q5TEC6 136 aa12.63□□□□□ -0.39
CCDC43-203ENST00000588210 HIST2H3AQ71DI3 136 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms