RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 IGHV3-64DA0A0J9YX35 117 aa16.88■□□□□ 0.29
TRIM47-204ENST00000587339 ZNF250P15622 560 aa16.88■□□□□ 0.29
TRIM47-204ENST00000587339 METTL11BQ5VVY1 283 aa16.88■□□□□ 0.29
TRIM47-204ENST00000587339 VHLLQ6RSH7 139 aa16.88■□□□□ 0.29
TRIM47-204ENST00000587339 WFDC8Q8IUA0 241 aa16.88■□□□□ 0.29
TRIM47-204ENST00000587339 FAM58AQ8N1B3 248 aa16.88■□□□□ 0.29
TRIM47-204ENST00000587339 SPERTQ8NA61 448 aa16.88■□□□□ 0.29
TRIM47-204ENST00000587339 MAFIPQ8WZ33 124 aa16.88■□□□□ 0.29
TRIM47-204ENST00000587339 ST6GAL2Q96JF0 529 aa16.88■□□□□ 0.29
TRIM47-204ENST00000587339 MED28Q9H204 178 aa16.88■□□□□ 0.29
TRIM47-204ENST00000587339 CXXC4Q9H2H0 198 aa16.88■□□□□ 0.29
TRIM47-204ENST00000587339 ZNF442Q9H7R0 627 aa16.88■□□□□ 0.29
TRIM47-204ENST00000587339 ZNF221Q9UK13 617 aa16.88■□□□□ 0.29
TRIM47-204ENST00000587339 UBE2QL1A1L167 161 aa16.88■□□□□ 0.29
TRIM47-204ENST00000587339 A8MV72 311 aaPredicted RBP16.88■□□□□ 0.29
TRIM47-204ENST00000587339 ERVH48-1M5A8F1 160 aa16.88■□□□□ 0.29
TRIM47-204ENST00000587339 TPD52L2O43399 206 aaKnown RBP16.88■□□□□ 0.29
TRIM47-204ENST00000587339 EIF2B2P49770 351 aaKnown RBP16.88■□□□□ 0.29
TRIM47-204ENST00000587339 TAS2R46P59540 309 aa16.88■□□□□ 0.29
TRIM47-204ENST00000587339 RPS23P62266 143 aaKnown RBP16.88■□□□□ 0.29
TRIM47-204ENST00000587339 ST3GAL2Q16842 350 aa16.88■□□□□ 0.29
TRIM47-204ENST00000587339 MSMPQ1L6U9 139 aa16.88■□□□□ 0.29
TRIM47-204ENST00000587339 VAX1Q5SQQ9 334 aa16.88■□□□□ 0.29
TRIM47-204ENST00000587339 LINC00596Q86U02 117 aa16.88■□□□□ 0.29
TRIM47-204ENST00000587339 PIAS4Q8N2W9 510 aaPredicted RBP16.88■□□□□ 0.29
TRIM47-204ENST00000587339 OR5H2Q8NGV7 314 aa16.88■□□□□ 0.29
TRIM47-204ENST00000587339 ITPR1Q14643 2758 aa16.87■□□□□ 0.29
TRIM47-204ENST00000587339 F5H5P2 479 aa16.87■□□□□ 0.29
TRIM47-204ENST00000587339 PTAFRP25105 342 aa16.87■□□□□ 0.29
TRIM47-204ENST00000587339 PMELP40967 661 aa16.87■□□□□ 0.29
TRIM47-204ENST00000587339 OR3A3P47888 321 aa16.87■□□□□ 0.29
TRIM47-204ENST00000587339 KLF3P57682 345 aaPredicted RBP16.87■□□□□ 0.29
TRIM47-204ENST00000587339 CD83Q01151 205 aa16.87■□□□□ 0.29
TRIM47-204ENST00000587339 IKZF1Q13422 519 aa16.87■□□□□ 0.29
TRIM47-204ENST00000587339 GLDNQ6ZMI3 551 aaPredicted RBP16.87■□□□□ 0.29
TRIM47-204ENST00000587339 LRP11Q86VZ4 500 aa16.87■□□□□ 0.29
TRIM47-204ENST00000587339 Q8IYB0 196 aa16.87■□□□□ 0.29
TRIM47-204ENST00000587339 OR13C8Q8NGS7 320 aa16.87■□□□□ 0.29
TRIM47-204ENST00000587339 TMEM171Q8WVE6 324 aa16.87■□□□□ 0.29
TRIM47-204ENST00000587339 EDARQ9UNE0 448 aa16.87■□□□□ 0.29
TRIM47-204ENST00000587339 POLEQ07864 2286 aa16.86■□□□□ 0.29
TRIM47-204ENST00000587339 H3BUI4 141 aa16.86■□□□□ 0.29
TRIM47-204ENST00000587339 IGHV3-13P01766 116 aa16.86■□□□□ 0.29
TRIM47-204ENST00000587339 DTYMKP23919 212 aa16.86■□□□□ 0.29
TRIM47-204ENST00000587339 DUSP1P28562 367 aa16.86■□□□□ 0.29
TRIM47-204ENST00000587339 MAB21L1Q13394 359 aa16.86■□□□□ 0.29
TRIM47-204ENST00000587339 CHRFAM7AQ494W8 412 aa16.86■□□□□ 0.29
TRIM47-204ENST00000587339 ARRDC1Q8N5I2 433 aa16.86■□□□□ 0.29
TRIM47-204ENST00000587339 OR5AP2Q8NGF4 316 aa16.86■□□□□ 0.29
TRIM47-204ENST00000587339 DYRK2Q92630 601 aa16.86■□□□□ 0.29
TRIM47-204ENST00000587339 MED30Q96HR3 178 aa16.86■□□□□ 0.29
TRIM47-204ENST00000587339 RANGRFQ9HD47 186 aaPredicted RBP16.86■□□□□ 0.29
TRIM47-204ENST00000587339 SHANK1Q9Y566 2161 aa16.86■□□□□ 0.29
TRIM47-204ENST00000587339 ESPL1Q14674 2120 aa16.86■□□□□ 0.29
TRIM47-204ENST00000587339 A0A1B0GWJ7 208 aa16.86■□□□□ 0.29
TRIM47-204ENST00000587339 TMEM82A0PJX8 343 aa16.86■□□□□ 0.29
TRIM47-204ENST00000587339 HPXP02790 462 aa16.86■□□□□ 0.29
TRIM47-204ENST00000587339 IL5P05113 134 aa16.86■□□□□ 0.29
TRIM47-204ENST00000587339 THBDP07204 575 aa16.86■□□□□ 0.29
TRIM47-204ENST00000587339 FCGR3AP08637 254 aa16.86■□□□□ 0.29
TRIM47-204ENST00000587339 PPP3CBP16298 524 aa16.86■□□□□ 0.29
TRIM47-204ENST00000587339 ASCL1P50553 236 aa16.86■□□□□ 0.29
TRIM47-204ENST00000587339 CHST6Q9GZX3 395 aa16.86■□□□□ 0.29
TRIM47-204ENST00000587339 GPN1Q9HCN4 374 aaPredicted RBP16.86■□□□□ 0.29
TRIM47-204ENST00000587339 C12orf4Q9NQ89 552 aa16.86■□□□□ 0.29
TRIM47-204ENST00000587339 RCC2Q9P258 522 aaKnown RBP16.86■□□□□ 0.29
TRIM47-204ENST00000587339 SSNA1O43805 119 aa16.85■□□□□ 0.29
TRIM47-204ENST00000587339 PGA5P0DJD9 388 aa16.85■□□□□ 0.29
TRIM47-204ENST00000587339 CHRNB4P30926 498 aa16.85■□□□□ 0.29
TRIM47-204ENST00000587339 ERVK11-1P61568 191 aa16.85■□□□□ 0.29
TRIM47-204ENST00000587339 TSPAN5P62079 268 aa16.85■□□□□ 0.29
TRIM47-204ENST00000587339 IL13RA2Q14627 380 aa16.85■□□□□ 0.29
TRIM47-204ENST00000587339 CD276Q5ZPR3 534 aa16.85■□□□□ 0.29
TRIM47-204ENST00000587339 SYT3Q9BQG1 590 aa16.85■□□□□ 0.29
TRIM47-204ENST00000587339 NRIP2Q9BQI9 281 aa16.85■□□□□ 0.29
TRIM47-204ENST00000587339 SEC22CQ9BRL7 303 aa16.85■□□□□ 0.29
TRIM47-204ENST00000587339 SPACA1Q9HBV2 294 aa16.85■□□□□ 0.29
TRIM47-204ENST00000587339 ING3Q9NXR8 418 aa16.85■□□□□ 0.29
TRIM47-204ENST00000587339 COQ3Q9NZJ6 369 aa16.85■□□□□ 0.29
TRIM47-204ENST00000587339 PCNX1Q96RV3 2341 aa16.85■□□□□ 0.29
TRIM47-204ENST00000587339 PLSCR5A0PG75 271 aa16.84■□□□□ 0.29
TRIM47-204ENST00000587339 SELENOVP59797 346 aa16.84■□□□□ 0.29
TRIM47-204ENST00000587339 MZT1Q08AG7 82 aa16.84■□□□□ 0.29
TRIM47-204ENST00000587339 FCN2Q15485 313 aa16.84■□□□□ 0.29
TRIM47-204ENST00000587339 PCSK4Q6UW60 755 aa16.84■□□□□ 0.29
TRIM47-204ENST00000587339 OR2Z1Q8NG97 314 aa16.84■□□□□ 0.29
TRIM47-204ENST00000587339 NBEAQ8NFP9 2946 aa16.84■□□□□ 0.29
TRIM47-204ENST00000587339 IGLV3-9A0A075B6K5 115 aa16.84■□□□□ 0.29
TRIM47-204ENST00000587339 IGKV1D-8A0A087WSZ0 117 aa16.84■□□□□ 0.29
TRIM47-204ENST00000587339 FAM221AA4D161 298 aa16.84■□□□□ 0.29
TRIM47-204ENST00000587339 A6NLC8 198 aa16.84■□□□□ 0.29
TRIM47-204ENST00000587339 C3orf80F5H4A9 247 aa16.84■□□□□ 0.29
TRIM47-204ENST00000587339 ABCD4O14678 606 aa16.84■□□□□ 0.29
TRIM47-204ENST00000587339 CREBL2O60519 120 aaPredicted RBP16.84■□□□□ 0.29
TRIM47-204ENST00000587339 VSIG10L2P0DP72 767 aa16.84■□□□□ 0.29
TRIM47-204ENST00000587339 ARPC4P59998 168 aa16.84■□□□□ 0.29
TRIM47-204ENST00000587339 SLC36A1Q7Z2H8 476 aa16.84■□□□□ 0.29
TRIM47-204ENST00000587339 TMED4Q7Z7H5 227 aa16.84■□□□□ 0.29
TRIM47-204ENST00000587339 TMEM17Q86X19 198 aa16.84■□□□□ 0.29
TRIM47-204ENST00000587339 NUP37Q8NFH4 326 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms