RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 HNRNPA0Q13151 305 aaKnown RBP13.48□□□□□ -0.25
ATG4D-205ENST00000586477 SLC22A6Q4U2R8 563 aa13.48□□□□□ -0.25
ATG4D-205ENST00000586477 HES5Q5TA89 166 aa13.48□□□□□ -0.25
ATG4D-205ENST00000586477 TEX36Q5VZQ5 186 aa13.48□□□□□ -0.25
ATG4D-205ENST00000586477 CRIP3Q6Q6R5 217 aa13.48□□□□□ -0.25
ATG4D-205ENST00000586477 FAM58AQ8N1B3 248 aa13.48□□□□□ -0.25
ATG4D-205ENST00000586477 SPICQ8N5J4 248 aa13.48□□□□□ -0.25
ATG4D-205ENST00000586477 Q8NFD4 153 aa13.48□□□□□ -0.25
ATG4D-205ENST00000586477 NDNFQ8TB73 568 aa13.48□□□□□ -0.25
ATG4D-205ENST00000586477 FAM3DQ96BQ1 224 aa13.48□□□□□ -0.25
ATG4D-205ENST00000586477 GFI1Q99684 422 aa13.48□□□□□ -0.25
ATG4D-205ENST00000586477 URM1Q9BTM9 101 aaKnown RBP13.48□□□□□ -0.25
ATG4D-205ENST00000586477 DNTTIP1Q9H147 329 aa13.48□□□□□ -0.25
ATG4D-205ENST00000586477 LIN7BQ9HAP6 207 aa13.48□□□□□ -0.25
ATG4D-205ENST00000586477 HES4Q9HCC6 221 aa13.48□□□□□ -0.25
ATG4D-205ENST00000586477 TREM2Q9NZC2 230 aa13.48□□□□□ -0.25
ATG4D-205ENST00000586477 CCDC59Q9P031 241 aaKnown RBP13.48□□□□□ -0.25
ATG4D-205ENST00000586477 FBLN5Q9UBX5 448 aa13.48□□□□□ -0.25
ATG4D-205ENST00000586477 DAPK2Q9UIK4 370 aa13.48□□□□□ -0.25
ATG4D-205ENST00000586477 CDC42EP3Q9UKI2 254 aa13.48□□□□□ -0.25
ATG4D-205ENST00000586477 A0A0G2JK05 382 aa13.47□□□□□ -0.25
ATG4D-205ENST00000586477 NKX6-3A6NJ46 265 aa13.47□□□□□ -0.25
ATG4D-205ENST00000586477 RNF212BA8MTL3 300 aa13.47□□□□□ -0.25
ATG4D-205ENST00000586477 HTR3BO95264 441 aa13.47□□□□□ -0.25
ATG4D-205ENST00000586477 ZNF182P17025 639 aaPredicted RBP13.47□□□□□ -0.25
ATG4D-205ENST00000586477 BCL3P20749 454 aa13.47□□□□□ -0.25
ATG4D-205ENST00000586477 SERPINA2P20848 420 aa13.47□□□□□ -0.25
ATG4D-205ENST00000586477 TMEM155Q4W5P6 130 aa13.47□□□□□ -0.25
ATG4D-205ENST00000586477 NHLRC3Q5JS37 347 aa13.47□□□□□ -0.25
ATG4D-205ENST00000586477 IDNKQ5T6J7 187 aa13.47□□□□□ -0.25
ATG4D-205ENST00000586477 MZT2AQ6P582 158 aa13.47□□□□□ -0.25
ATG4D-205ENST00000586477 ACP7Q6ZNF0 438 aa13.47□□□□□ -0.25
ATG4D-205ENST00000586477 IL17RELQ6ZVW7 336 aa13.47□□□□□ -0.25
ATG4D-205ENST00000586477 OSR2Q8N2R0 312 aa13.47□□□□□ -0.25
ATG4D-205ENST00000586477 BOLLQ8N9W6 283 aaKnown RBP13.47□□□□□ -0.25
ATG4D-205ENST00000586477 PTX4Q96A99 478 aa13.47□□□□□ -0.25
ATG4D-205ENST00000586477 SEBOXQ9HB31 216 aaPredicted RBP13.47□□□□□ -0.25
ATG4D-205ENST00000586477 HMG20AQ9NP66 347 aa13.47□□□□□ -0.25
ATG4D-205ENST00000586477 NLKQ9UBE8 527 aa13.47□□□□□ -0.25
ATG4D-205ENST00000586477 CACNG2Q9Y698 323 aa13.47□□□□□ -0.25
ATG4D-205ENST00000586477 IGKV1-12A0A0C4DH73 117 aa13.46□□□□□ -0.25
ATG4D-205ENST00000586477 ISPDA4D126 451 aa13.46□□□□□ -0.25
ATG4D-205ENST00000586477 FAM90A10PA6NDY2 464 aa13.46□□□□□ -0.25
ATG4D-205ENST00000586477 FAM90A18PA6NE21 464 aa13.46□□□□□ -0.25
ATG4D-205ENST00000586477 FAM90A16PA6NEW6 464 aa13.46□□□□□ -0.25
ATG4D-205ENST00000586477 FAM90A20PA6NIJ5 464 aa13.46□□□□□ -0.25
ATG4D-205ENST00000586477 FAM90A8PA6NJQ4 464 aa13.46□□□□□ -0.25
ATG4D-205ENST00000586477 FAM90A7PA6NKC0 464 aa13.46□□□□□ -0.25
ATG4D-205ENST00000586477 FAM90A22PA8MWA6 464 aa13.46□□□□□ -0.25
ATG4D-205ENST00000586477 FAM90A12PA8MX19 464 aa13.46□□□□□ -0.25
ATG4D-205ENST00000586477 FAM90A5PA8MXJ8 464 aa13.46□□□□□ -0.25
ATG4D-205ENST00000586477 FAM90A23PA8MXZ1 464 aa13.46□□□□□ -0.25
ATG4D-205ENST00000586477 CRTAPO75718 401 aaPredicted RBP13.46□□□□□ -0.25
ATG4D-205ENST00000586477 SCGNO76038 276 aa13.46□□□□□ -0.25
ATG4D-205ENST00000586477 IGKV1D-12P01611 117 aa13.46□□□□□ -0.25
ATG4D-205ENST00000586477 FAM90A15PP0C7V4 464 aa13.46□□□□□ -0.25
ATG4D-205ENST00000586477 FAM90A13PP0C7W8 464 aa13.46□□□□□ -0.25
ATG4D-205ENST00000586477 FAM90A14PP0C7W9 464 aa13.46□□□□□ -0.25
ATG4D-205ENST00000586477 FAM90A24PP0C7X0 464 aa13.46□□□□□ -0.25
ATG4D-205ENST00000586477 PRKACAP17612 351 aa13.46□□□□□ -0.25
ATG4D-205ENST00000586477 RAB6AP20340 208 aa13.46□□□□□ -0.25
ATG4D-205ENST00000586477 TGFBR1P36897 503 aa13.46□□□□□ -0.25
ATG4D-205ENST00000586477 RBMXP38159 391 aaKnown RBP13.46□□□□□ -0.25
ATG4D-205ENST00000586477 IL13RA2Q14627 380 aa13.46□□□□□ -0.25
ATG4D-205ENST00000586477 DCDC5Q6ZRR9 648 aa13.46□□□□□ -0.25
ATG4D-205ENST00000586477 NR2C2APQ86WQ0 139 aa13.46□□□□□ -0.25
ATG4D-205ENST00000586477 CHST4Q8NCG5 386 aa13.46□□□□□ -0.25
ATG4D-205ENST00000586477 OR51T1Q8NGJ9 327 aa13.46□□□□□ -0.25
ATG4D-205ENST00000586477 CLDND2Q8NHS1 167 aa13.46□□□□□ -0.25
ATG4D-205ENST00000586477 SLC25A28Q96A46 364 aa13.46□□□□□ -0.25
ATG4D-205ENST00000586477 TMEM59Q9BXS4 323 aa13.46□□□□□ -0.25
ATG4D-205ENST00000586477 BEX2Q9BXY8 128 aa13.46□□□□□ -0.25
ATG4D-205ENST00000586477 SPACA1Q9HBV2 294 aa13.46□□□□□ -0.25
ATG4D-205ENST00000586477 RBFOX1Q9NWB1 397 aaKnown RBP13.46□□□□□ -0.25
ATG4D-205ENST00000586477 WIPI2Q9Y4P8 454 aa13.46□□□□□ -0.25
ATG4D-205ENST00000586477 SMIM30A4D0T7 59 aa13.45□□□□□ -0.26
ATG4D-205ENST00000586477 METTL21EPA6NDL7 271 aa13.45□□□□□ -0.26
ATG4D-205ENST00000586477 A6NHS1 94 aa13.45□□□□□ -0.26
ATG4D-205ENST00000586477 OR2AT4A6NND4 320 aa13.45□□□□□ -0.26
ATG4D-205ENST00000586477 FAM157AC9JC47 383 aa13.45□□□□□ -0.26
ATG4D-205ENST00000586477 SH2D1BO14796 132 aa13.45□□□□□ -0.26
ATG4D-205ENST00000586477 TGFAP01135 160 aa13.45□□□□□ -0.26
ATG4D-205ENST00000586477 IGHV2-70P01814 119 aa13.45□□□□□ -0.26
ATG4D-205ENST00000586477 SFTPBP07988 381 aa13.45□□□□□ -0.26
ATG4D-205ENST00000586477 CLEC2LP0C7M8 214 aa13.45□□□□□ -0.26
ATG4D-205ENST00000586477 FAM157CP0CG43 387 aa13.45□□□□□ -0.26
ATG4D-205ENST00000586477 MGMTP16455 207 aa13.45□□□□□ -0.26
ATG4D-205ENST00000586477 NPBWR2P48146 333 aa13.45□□□□□ -0.26
ATG4D-205ENST00000586477 LMO4P61968 165 aa13.45□□□□□ -0.26
ATG4D-205ENST00000586477 SPCS2Q15005 226 aa13.45□□□□□ -0.26
ATG4D-205ENST00000586477 ZNF146Q15072 292 aa13.45□□□□□ -0.26
ATG4D-205ENST00000586477 P2RY14Q15391 338 aa13.45□□□□□ -0.26
ATG4D-205ENST00000586477 MPV17LQ2QL34 196 aa13.45□□□□□ -0.26
ATG4D-205ENST00000586477 C2orf76Q3KRA6 126 aa13.45□□□□□ -0.26
ATG4D-205ENST00000586477 ZNF404Q494X3 552 aa13.45□□□□□ -0.26
ATG4D-205ENST00000586477 FAM120AOSQ5T036 256 aa13.45□□□□□ -0.26
ATG4D-205ENST00000586477 NLRC3Q7RTR2 1065 aa13.45□□□□□ -0.26
ATG4D-205ENST00000586477 SLC36A1Q7Z2H8 476 aa13.45□□□□□ -0.26
ATG4D-205ENST00000586477 C1QL2Q7Z5L3 287 aa13.45□□□□□ -0.26
ATG4D-205ENST00000586477 LRRC28Q86X40 367 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms