RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 ZNF367Q7RTV3 350 aa11.42□□□□□ -0.58
PRKCSH-202ENST00000585540 SPARTQ8N0X7 666 aa11.42□□□□□ -0.58
PRKCSH-202ENST00000585540 OR5T2Q8NGG2 359 aa11.42□□□□□ -0.58
PRKCSH-202ENST00000585540 TMEM158Q8WZ71 300 aa11.42□□□□□ -0.58
PRKCSH-202ENST00000585540 SLAMF9Q96A28 289 aa11.42□□□□□ -0.58
PRKCSH-202ENST00000585540 SEH1LQ96EE3 360 aa11.42□□□□□ -0.58
PRKCSH-202ENST00000585540 GPER1Q99527 375 aa11.42□□□□□ -0.58
PRKCSH-202ENST00000585540 SIRPDQ9H106 197 aa11.42□□□□□ -0.58
PRKCSH-202ENST00000585540 UNKLQ9H9P5 680 aaKnown RBP11.42□□□□□ -0.58
PRKCSH-202ENST00000585540 HMG20AQ9NP66 347 aa11.42□□□□□ -0.58
PRKCSH-202ENST00000585540 TAS2R4Q9NYW5 299 aa11.42□□□□□ -0.58
PRKCSH-202ENST00000585540 IL36GQ9NZH8 169 aa11.42□□□□□ -0.58
PRKCSH-202ENST00000585540 ANK3Q12955 4377 aaKnown RBP11.42□□□□□ -0.58
PRKCSH-202ENST00000585540 ARHGAP32A7KAX9 2087 aa11.41□□□□□ -0.58
PRKCSH-202ENST00000585540 TRBV5-7A0A0A0MS05 114 aa11.41□□□□□ -0.58
PRKCSH-202ENST00000585540 MEGF11A6BM72 1044 aa11.41□□□□□ -0.58
PRKCSH-202ENST00000585540 K7N7A8 449 aa11.41□□□□□ -0.58
PRKCSH-202ENST00000585540 INMTO95050 263 aa11.41□□□□□ -0.58
PRKCSH-202ENST00000585540 RBP4P02753 201 aa11.41□□□□□ -0.58
PRKCSH-202ENST00000585540 TK1P04183 234 aa11.41□□□□□ -0.58
PRKCSH-202ENST00000585540 MMP9P14780 707 aa11.41□□□□□ -0.58
PRKCSH-202ENST00000585540 HILS1P60008 231 aa11.41□□□□□ -0.58
PRKCSH-202ENST00000585540 MEF2CQ06413 473 aaPredicted RBP11.41□□□□□ -0.58
PRKCSH-202ENST00000585540 MLLT11Q13015 90 aaPredicted RBP11.41□□□□□ -0.58
PRKCSH-202ENST00000585540 IL13RA2Q14627 380 aa11.41□□□□□ -0.58
PRKCSH-202ENST00000585540 INSL4Q14641 139 aa11.41□□□□□ -0.58
PRKCSH-202ENST00000585540 ZNF773Q6PK81 442 aa11.41□□□□□ -0.58
PRKCSH-202ENST00000585540 RBMS3Q6XE24 437 aaKnown RBP11.41□□□□□ -0.58
PRKCSH-202ENST00000585540 RNF144BQ7Z419 303 aa11.41□□□□□ -0.58
PRKCSH-202ENST00000585540 LINC00596Q86U02 117 aa11.41□□□□□ -0.58
PRKCSH-202ENST00000585540 OR8H2Q8N162 312 aa11.41□□□□□ -0.58
PRKCSH-202ENST00000585540 SVOPQ8N4V2 548 aa11.41□□□□□ -0.58
PRKCSH-202ENST00000585540 CD177Q8N6Q3 437 aa11.41□□□□□ -0.58
PRKCSH-202ENST00000585540 Q8NFD4 153 aa11.41□□□□□ -0.58
PRKCSH-202ENST00000585540 OR51A2Q8NGJ7 313 aa11.41□□□□□ -0.58
PRKCSH-202ENST00000585540 H1FXQ92522 213 aaKnown RBP11.41□□□□□ -0.58
PRKCSH-202ENST00000585540 ZNF488Q96MN9 340 aa11.41□□□□□ -0.58
PRKCSH-202ENST00000585540 OR14A2Q96R54 314 aa11.41□□□□□ -0.58
PRKCSH-202ENST00000585540 S100A13Q99584 98 aa11.41□□□□□ -0.58
PRKCSH-202ENST00000585540 MGLLQ99685 303 aa11.41□□□□□ -0.58
PRKCSH-202ENST00000585540 TMED9Q9BVK6 235 aa11.41□□□□□ -0.58
PRKCSH-202ENST00000585540 MS4A7Q9GZW8 240 aaPredicted RBP11.41□□□□□ -0.58
PRKCSH-202ENST00000585540 EXOSC4Q9NPD3 245 aaKnown RBP11.41□□□□□ -0.58
PRKCSH-202ENST00000585540 OR14J1Q9UGF5 321 aa11.41□□□□□ -0.58
PRKCSH-202ENST00000585540 JMJD1CQ15652 2540 aa11.4□□□□□ -0.58
PRKCSH-202ENST00000585540 TRAV40A0A0B4J280 105 aa11.4□□□□□ -0.58
PRKCSH-202ENST00000585540 A0A1W2PPK0 400 aa11.4□□□□□ -0.58
PRKCSH-202ENST00000585540 A0A1W2PQ09 198 aa11.4□□□□□ -0.58
PRKCSH-202ENST00000585540 H3BUI4 141 aa11.4□□□□□ -0.58
PRKCSH-202ENST00000585540 SH2D1BO14796 132 aa11.4□□□□□ -0.58
PRKCSH-202ENST00000585540 HAND1O96004 215 aa11.4□□□□□ -0.58
PRKCSH-202ENST00000585540 CSN2P05814 226 aa11.4□□□□□ -0.58
PRKCSH-202ENST00000585540 TMEM225BP0DP42 221 aa11.4□□□□□ -0.58
PRKCSH-202ENST00000585540 PRKACAP17612 351 aa11.4□□□□□ -0.58
PRKCSH-202ENST00000585540 BCL3P20749 454 aa11.4□□□□□ -0.58
PRKCSH-202ENST00000585540 ERP29P30040 261 aaKnown RBP11.4□□□□□ -0.58
PRKCSH-202ENST00000585540 ZNF93P35789 620 aaPredicted RBP11.4□□□□□ -0.58
PRKCSH-202ENST00000585540 KCNJ3P48549 501 aa11.4□□□□□ -0.58
PRKCSH-202ENST00000585540 RPS25P62851 125 aaKnown RBP11.4□□□□□ -0.58
PRKCSH-202ENST00000585540 NHLRC3Q5JS37 347 aa11.4□□□□□ -0.58
PRKCSH-202ENST00000585540 DDI2Q5TDH0 399 aa11.4□□□□□ -0.58
PRKCSH-202ENST00000585540 ASCL4Q6XD76 172 aa11.4□□□□□ -0.58
PRKCSH-202ENST00000585540 BATF2Q8N1L9 274 aa11.4□□□□□ -0.58
PRKCSH-202ENST00000585540 ZNRF1Q8ND25 227 aa11.4□□□□□ -0.58
PRKCSH-202ENST00000585540 RFT1Q96AA3 541 aa11.4□□□□□ -0.58
PRKCSH-202ENST00000585540 FOXRED1Q96CU9 486 aaPredicted RBP11.4□□□□□ -0.58
PRKCSH-202ENST00000585540 DERL3Q96Q80 235 aa11.4□□□□□ -0.58
PRKCSH-202ENST00000585540 SPACA5Q96QH8 159 aa11.4□□□□□ -0.58
PRKCSH-202ENST00000585540 METTL8Q9H825 291 aaKnown RBP11.4□□□□□ -0.58
PRKCSH-202ENST00000585540 GHRLQ9UBU3 117 aa11.4□□□□□ -0.58
PRKCSH-202ENST00000585540 NF1P21359 2839 aa11.39□□□□□ -0.59
PRKCSH-202ENST00000585540 A0A1B0GW55 424 aa11.39□□□□□ -0.59
PRKCSH-202ENST00000585540 GABRPO00591 440 aa11.39□□□□□ -0.59
PRKCSH-202ENST00000585540 MGST3O14880 152 aa11.39□□□□□ -0.59
PRKCSH-202ENST00000585540 PIN1P1O15428 100 aa11.39□□□□□ -0.59
PRKCSH-202ENST00000585540 SPRY1O43609 319 aaPredicted RBP11.39□□□□□ -0.59
PRKCSH-202ENST00000585540 ZNF737O75373 536 aa11.39□□□□□ -0.59
PRKCSH-202ENST00000585540 FCN3O75636 299 aa11.39□□□□□ -0.59
PRKCSH-202ENST00000585540 TNFAIP8O95379 198 aa11.39□□□□□ -0.59
PRKCSH-202ENST00000585540 DUX4L2P0CJ85 424 aa11.39□□□□□ -0.59
PRKCSH-202ENST00000585540 DUX4L3P0CJ86 424 aa11.39□□□□□ -0.59
PRKCSH-202ENST00000585540 DUX4L4P0CJ87 422 aa11.39□□□□□ -0.59
PRKCSH-202ENST00000585540 DUX4L5P0CJ88 424 aa11.39□□□□□ -0.59
PRKCSH-202ENST00000585540 DUX4L6P0CJ89 424 aa11.39□□□□□ -0.59
PRKCSH-202ENST00000585540 DUX4L7P0CJ90 424 aa11.39□□□□□ -0.59
PRKCSH-202ENST00000585540 CPEP16870 476 aa11.39□□□□□ -0.59
PRKCSH-202ENST00000585540 LMO1P25800 156 aa11.39□□□□□ -0.59
PRKCSH-202ENST00000585540 RPL31P62899 125 aaKnown RBP11.39□□□□□ -0.59
PRKCSH-202ENST00000585540 COL10A1Q03692 680 aa11.39□□□□□ -0.59
PRKCSH-202ENST00000585540 TPBGQ13641 420 aa11.39□□□□□ -0.59
PRKCSH-202ENST00000585540 SSX1Q16384 188 aa11.39□□□□□ -0.59
PRKCSH-202ENST00000585540 KLF17Q5JT82 389 aaPredicted RBP11.39□□□□□ -0.59
PRKCSH-202ENST00000585540 UBE2UQ5VVX9 321 aa11.39□□□□□ -0.59
PRKCSH-202ENST00000585540 CRIP3Q6Q6R5 217 aa11.39□□□□□ -0.59
PRKCSH-202ENST00000585540 DUX4L9Q6RFH8 374 aaPredicted RBP11.39□□□□□ -0.59
PRKCSH-202ENST00000585540 GDPD3Q7L5L3 318 aa11.39□□□□□ -0.59
PRKCSH-202ENST00000585540 ASCC1Q8N9N2 400 aaKnown RBP11.39□□□□□ -0.59
PRKCSH-202ENST00000585540 OR51T1Q8NGJ9 327 aa11.39□□□□□ -0.59
PRKCSH-202ENST00000585540 TNFAIP8L1Q8WVP5 186 aa11.39□□□□□ -0.59
PRKCSH-202ENST00000585540 FCGR1BQ92637 280 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms