RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 MSI2Q96DH6 328 aaKnown RBP12.31□□□□□ -0.44
CDK5RAP3-237ENST00000585163 C12orf57Q99622 126 aa12.31□□□□□ -0.44
CDK5RAP3-237ENST00000585163 GINS3Q9BRX5 216 aa12.31□□□□□ -0.44
CDK5RAP3-237ENST00000585163 PARP12Q9H0J9 701 aaKnown RBP12.31□□□□□ -0.44
CDK5RAP3-237ENST00000585163 BCO1Q9HAY6 547 aa12.31□□□□□ -0.44
CDK5RAP3-237ENST00000585163 BORCS7-ASMTA0A0B4J1R7 106 aa12.31□□□□□ -0.44
CDK5RAP3-237ENST00000585163 MASP2O00187 686 aa12.31□□□□□ -0.44
CDK5RAP3-237ENST00000585163 GPR137BO60478 399 aa12.31□□□□□ -0.44
CDK5RAP3-237ENST00000585163 DIRAS3O95661 229 aa12.31□□□□□ -0.44
CDK5RAP3-237ENST00000585163 ZNF32P17041 273 aa12.31□□□□□ -0.44
CDK5RAP3-237ENST00000585163 P2RY1P47900 373 aa12.31□□□□□ -0.44
CDK5RAP3-237ENST00000585163 MIDNQ504T8 468 aa12.31□□□□□ -0.44
CDK5RAP3-237ENST00000585163 PHLDA2Q53GA4 152 aa12.31□□□□□ -0.44
CDK5RAP3-237ENST00000585163 LYSMD4Q5XG99 296 aa12.31□□□□□ -0.44
CDK5RAP3-237ENST00000585163 BRICD5Q6PL45 260 aa12.31□□□□□ -0.44
CDK5RAP3-237ENST00000585163 SLC22A25Q6T423 547 aa12.31□□□□□ -0.44
CDK5RAP3-237ENST00000585163 RPS19BP1Q86WX3 136 aaKnown RBP12.31□□□□□ -0.44
CDK5RAP3-237ENST00000585163 FBXL14Q8N1E6 418 aa12.31□□□□□ -0.44
CDK5RAP3-237ENST00000585163 C15orf54Q8N8G6 183 aa12.31□□□□□ -0.44
CDK5RAP3-237ENST00000585163 MR1Q95460 341 aa12.31□□□□□ -0.44
CDK5RAP3-237ENST00000585163 SCRT1Q9BWW7 348 aa12.31□□□□□ -0.44
CDK5RAP3-237ENST00000585163 EGLN1Q9GZT9 426 aa12.31□□□□□ -0.44
CDK5RAP3-237ENST00000585163 WFDC1Q9HC57 220 aa12.31□□□□□ -0.44
CDK5RAP3-237ENST00000585163 FSCN3Q9NQT6 498 aa12.31□□□□□ -0.44
CDK5RAP3-237ENST00000585163 IL36GQ9NZH8 169 aa12.31□□□□□ -0.44
CDK5RAP3-237ENST00000585163 ZNF391Q9UJN7 358 aa12.31□□□□□ -0.44
CDK5RAP3-237ENST00000585163 SDK2Q58EX2 2172 aa12.3□□□□□ -0.44
CDK5RAP3-237ENST00000585163 PRSS44E7EML9 344 aa12.3□□□□□ -0.44
CDK5RAP3-237ENST00000585163 PPT1P50897 306 aa12.3□□□□□ -0.44
CDK5RAP3-237ENST00000585163 UCP3P55916 312 aa12.3□□□□□ -0.44
CDK5RAP3-237ENST00000585163 ZNF100Q8IYN0 542 aa12.3□□□□□ -0.44
CDK5RAP3-237ENST00000585163 CPT1CQ8TCG5 803 aa12.3□□□□□ -0.44
CDK5RAP3-237ENST00000585163 MOB3AQ96BX8 217 aa12.3□□□□□ -0.44
CDK5RAP3-237ENST00000585163 SYT3Q9BQG1 590 aa12.3□□□□□ -0.44
CDK5RAP3-237ENST00000585163 ST3GAL6Q9Y274 331 aa12.3□□□□□ -0.44
CDK5RAP3-237ENST00000585163 FAM221AA4D161 298 aa12.3□□□□□ -0.44
CDK5RAP3-237ENST00000585163 XRCC2O43543 280 aa12.3□□□□□ -0.44
CDK5RAP3-237ENST00000585163 B4GALT1P15291 398 aa12.3□□□□□ -0.44
CDK5RAP3-237ENST00000585163 DUSP1P28562 367 aa12.3□□□□□ -0.44
CDK5RAP3-237ENST00000585163 MLF1P58340 268 aa12.3□□□□□ -0.44
CDK5RAP3-237ENST00000585163 B3GALT5-AS1P59052 145 aa12.3□□□□□ -0.44
CDK5RAP3-237ENST00000585163 IL13RA2Q14627 380 aa12.3□□□□□ -0.44
CDK5RAP3-237ENST00000585163 ETV3LQ6ZN32 361 aa12.3□□□□□ -0.44
CDK5RAP3-237ENST00000585163 ZFP82Q8N141 532 aa12.3□□□□□ -0.44
CDK5RAP3-237ENST00000585163 LGI3Q8N145 548 aa12.3□□□□□ -0.44
CDK5RAP3-237ENST00000585163 AGBL5Q8NDL9 886 aa12.3□□□□□ -0.44
CDK5RAP3-237ENST00000585163 OR52M1Q8NGK5 317 aa12.3□□□□□ -0.44
CDK5RAP3-237ENST00000585163 OR5L1Q8NGL2 311 aa12.3□□□□□ -0.44
CDK5RAP3-237ENST00000585163 AKR7LQ8NHP1 331 aa12.3□□□□□ -0.44
CDK5RAP3-237ENST00000585163 ZNF286AQ9HBT8 521 aa12.3□□□□□ -0.44
CDK5RAP3-237ENST00000585163 LUZP4Q9P127 313 aa12.3□□□□□ -0.44
CDK5RAP3-237ENST00000585163 ZDHHC8Q9ULC8 765 aa12.3□□□□□ -0.44
CDK5RAP3-237ENST00000585163 CNTRLQ7Z7A1 2325 aa12.29□□□□□ -0.44
CDK5RAP3-237ENST00000585163 ZNF716A6NP11 495 aa12.29□□□□□ -0.44
CDK5RAP3-237ENST00000585163 IFNA4P05014 189 aa12.29□□□□□ -0.44
CDK5RAP3-237ENST00000585163 PATE4P0C8F1 98 aa12.29□□□□□ -0.44
CDK5RAP3-237ENST00000585163 HTR5AP47898 357 aa12.29□□□□□ -0.44
CDK5RAP3-237ENST00000585163 HLA-BQ31612 363 aa12.29□□□□□ -0.44
CDK5RAP3-237ENST00000585163 ZNF468Q5VIY5 522 aaPredicted RBP12.29□□□□□ -0.44
CDK5RAP3-237ENST00000585163 SFT2D1Q8WV19 159 aa12.29□□□□□ -0.44
CDK5RAP3-237ENST00000585163 ALKBH3Q96Q83 286 aaPredicted RBP12.29□□□□□ -0.44
CDK5RAP3-237ENST00000585163 RGCCQ9H4X1 137 aa12.29□□□□□ -0.44
CDK5RAP3-237ENST00000585163 hCG_38984A0A1B0GV85 526 aa12.29□□□□□ -0.44
CDK5RAP3-237ENST00000585163 ST8SIA3O43173 380 aa12.29□□□□□ -0.44
CDK5RAP3-237ENST00000585163 NME2P1O60361 137 aa12.29□□□□□ -0.44
CDK5RAP3-237ENST00000585163 GLI4P10075 376 aa12.29□□□□□ -0.44
CDK5RAP3-237ENST00000585163 TCN2P20062 427 aa12.29□□□□□ -0.44
CDK5RAP3-237ENST00000585163 FUT6P51993 359 aa12.29□□□□□ -0.44
CDK5RAP3-237ENST00000585163 PSG4Q00888 419 aa12.29□□□□□ -0.44
CDK5RAP3-237ENST00000585163 ZNF616Q08AN1 781 aa12.29□□□□□ -0.44
CDK5RAP3-237ENST00000585163 GUK1Q16774 197 aa12.29□□□□□ -0.44
CDK5RAP3-237ENST00000585163 FBXW12Q6X9E4 464 aa12.29□□□□□ -0.44
CDK5RAP3-237ENST00000585163 Q6ZPA2 131 aa12.29□□□□□ -0.44
CDK5RAP3-237ENST00000585163 KDF1Q8NAX2 398 aaPredicted RBP12.29□□□□□ -0.44
CDK5RAP3-237ENST00000585163 OR11L1Q8NGX0 322 aa12.29□□□□□ -0.44
CDK5RAP3-237ENST00000585163 IFI44Q8TCB0 444 aa12.29□□□□□ -0.44
CDK5RAP3-237ENST00000585163 CLCC1Q96S66 551 aa12.29□□□□□ -0.44
CDK5RAP3-237ENST00000585163 C9J4A7 227 aa12.28□□□□□ -0.44
CDK5RAP3-237ENST00000585163 PDCD6O75340 191 aa12.28□□□□□ -0.44
CDK5RAP3-237ENST00000585163 FHITP49789 147 aa12.28□□□□□ -0.44
CDK5RAP3-237ENST00000585163 RAB5CP51148 216 aa12.28□□□□□ -0.44
CDK5RAP3-237ENST00000585163 CARD18P57730 90 aa12.28□□□□□ -0.44
CDK5RAP3-237ENST00000585163 ZNF92Q03936 586 aa12.28□□□□□ -0.44
CDK5RAP3-237ENST00000585163 HABP2Q14520 560 aaPredicted RBP12.28□□□□□ -0.44
CDK5RAP3-237ENST00000585163 GGNQ86UU5 652 aa12.28□□□□□ -0.44
CDK5RAP3-237ENST00000585163 NAXEQ8NCW5 288 aa12.28□□□□□ -0.44
CDK5RAP3-237ENST00000585163 OR2Y1Q8NGV0 311 aa12.28□□□□□ -0.44
CDK5RAP3-237ENST00000585163 HPSE2Q8WWQ2 592 aa12.28□□□□□ -0.44
CDK5RAP3-237ENST00000585163 C14orf79Q96F83 325 aa12.28□□□□□ -0.44
CDK5RAP3-237ENST00000585163 RSRP1Q9BUV0 290 aa12.28□□□□□ -0.44
CDK5RAP3-237ENST00000585163 TMED3Q9Y3Q3 217 aa12.28□□□□□ -0.44
CDK5RAP3-237ENST00000585163 SHANK1Q9Y566 2161 aa12.28□□□□□ -0.44
CDK5RAP3-237ENST00000585163 NSG1A0A0A6YYJ2 146 aa12.28□□□□□ -0.44
CDK5RAP3-237ENST00000585163 LMO1P25800 156 aa12.28□□□□□ -0.44
CDK5RAP3-237ENST00000585163 SRD5A2P31213 254 aa12.28□□□□□ -0.44
CDK5RAP3-237ENST00000585163 CAMLGP49069 296 aa12.28□□□□□ -0.44
CDK5RAP3-237ENST00000585163 RAB5BP61020 215 aa12.28□□□□□ -0.44
CDK5RAP3-237ENST00000585163 MALLQ13021 153 aa12.28□□□□□ -0.44
CDK5RAP3-237ENST00000585163 OR8B8Q15620 311 aa12.28□□□□□ -0.44
CDK5RAP3-237ENST00000585163 TMEM211Q6ICI0 200 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms