RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 GUSBP1Q15486 140 aa12.96□□□□□ -0.33
CDK5RAP3-236ENST00000584991 FAM214BQ7L5A3 538 aa12.96□□□□□ -0.33
CDK5RAP3-236ENST00000584991 FAM57AQ8TBR7 257 aa12.96□□□□□ -0.33
CDK5RAP3-236ENST00000584991 DCUN1D4Q92564 292 aa12.96□□□□□ -0.33
CDK5RAP3-236ENST00000584991 TMEM230Q96A57 120 aa12.96□□□□□ -0.33
CDK5RAP3-236ENST00000584991 FBXO17Q96EF6 278 aa12.96□□□□□ -0.33
CDK5RAP3-236ENST00000584991 SAT2Q96F10 170 aaPredicted RBP12.96□□□□□ -0.33
CDK5RAP3-236ENST00000584991 RTBDNQ9BSG5 229 aaPredicted RBP12.96□□□□□ -0.33
CDK5RAP3-236ENST00000584991 ZGRF1Q86YA3 2104 aa12.96□□□□□ -0.34
CDK5RAP3-236ENST00000584991 KLRB1Q12918 225 aa12.95□□□□□ -0.34
CDK5RAP3-236ENST00000584991 AADACL3Q5VUY0 350 aa12.95□□□□□ -0.34
CDK5RAP3-236ENST00000584991 OR2A2Q6IF42 318 aa12.95□□□□□ -0.34
CDK5RAP3-236ENST00000584991 SEM1Q6ZVN7 128 aa12.95□□□□□ -0.34
CDK5RAP3-236ENST00000584991 CNEP1R1Q8N9A8 125 aa12.95□□□□□ -0.34
CDK5RAP3-236ENST00000584991 BPIFCQ8NFQ6 507 aa12.95□□□□□ -0.34
CDK5RAP3-236ENST00000584991 ARL11Q969Q4 196 aa12.95□□□□□ -0.34
CDK5RAP3-236ENST00000584991 SPTSSAQ969W0 71 aa12.95□□□□□ -0.34
CDK5RAP3-236ENST00000584991 LRRC46Q96FV0 321 aa12.95□□□□□ -0.34
CDK5RAP3-236ENST00000584991 BANF2Q9H503 90 aa12.95□□□□□ -0.34
CDK5RAP3-236ENST00000584991 DECR2Q9NUI1 292 aa12.95□□□□□ -0.34
CDK5RAP3-236ENST00000584991 MBD3L4A6NDZ8 208 aaPredicted RBP12.95□□□□□ -0.34
CDK5RAP3-236ENST00000584991 MBD3L3A6NE82 208 aaPredicted RBP12.95□□□□□ -0.34
CDK5RAP3-236ENST00000584991 MBD3L5A6NJ08 208 aaPredicted RBP12.95□□□□□ -0.34
CDK5RAP3-236ENST00000584991 TPD52L2O43399 206 aaKnown RBP12.95□□□□□ -0.34
CDK5RAP3-236ENST00000584991 ATG12O94817 140 aa12.95□□□□□ -0.34
CDK5RAP3-236ENST00000584991 CST2P09228 141 aa12.95□□□□□ -0.34
CDK5RAP3-236ENST00000584991 KIR2DL2P43627 348 aaPredicted RBP12.95□□□□□ -0.34
CDK5RAP3-236ENST00000584991 SNU13P55769 128 aaKnown RBP12.95□□□□□ -0.34
CDK5RAP3-236ENST00000584991 FOXF2Q12947 444 aa12.95□□□□□ -0.34
CDK5RAP3-236ENST00000584991 IL15RAQ13261 267 aa12.95□□□□□ -0.34
CDK5RAP3-236ENST00000584991 FAM74A1Q5RGS3 127 aa12.95□□□□□ -0.34
CDK5RAP3-236ENST00000584991 C10orf91Q5T1B1 145 aa12.95□□□□□ -0.34
CDK5RAP3-236ENST00000584991 C1orf185Q5T7R7 199 aa12.95□□□□□ -0.34
CDK5RAP3-236ENST00000584991 FBXW9Q5XUX1 488 aa12.95□□□□□ -0.34
CDK5RAP3-236ENST00000584991 GFRALQ6UXV0 394 aa12.95□□□□□ -0.34
CDK5RAP3-236ENST00000584991 IL34Q6ZMJ4 242 aa12.95□□□□□ -0.34
CDK5RAP3-236ENST00000584991 SVBPQ8N300 66 aa12.95□□□□□ -0.34
CDK5RAP3-236ENST00000584991 MBD3L2Q8NHZ7 208 aaPredicted RBP12.95□□□□□ -0.34
CDK5RAP3-236ENST00000584991 POM121Q96HA1 1249 aa12.95□□□□□ -0.34
CDK5RAP3-236ENST00000584991 PECRQ9BY49 303 aa12.95□□□□□ -0.34
CDK5RAP3-236ENST00000584991 ZNF391Q9UJN7 358 aa12.95□□□□□ -0.34
CDK5RAP3-236ENST00000584991 PCDHB10Q9UN67 800 aa12.95□□□□□ -0.34
CDK5RAP3-236ENST00000584991 C14orf166Q9Y224 244 aaKnown RBP12.95□□□□□ -0.34
CDK5RAP3-236ENST00000584991 PRELID1Q9Y255 219 aa12.95□□□□□ -0.34
CDK5RAP3-236ENST00000584991 FAM215AQ9Y5M1 114 aa12.95□□□□□ -0.34
CDK5RAP3-236ENST00000584991 TMEM218A2RU14 115 aa12.94□□□□□ -0.34
CDK5RAP3-236ENST00000584991 RAD51DO75771 328 aa12.94□□□□□ -0.34
CDK5RAP3-236ENST00000584991 PATE4P0C8F1 98 aa12.94□□□□□ -0.34
CDK5RAP3-236ENST00000584991 SLC2A1P11166 492 aa12.94□□□□□ -0.34
CDK5RAP3-236ENST00000584991 BLVRBP30043 206 aaPredicted RBP12.94□□□□□ -0.34
CDK5RAP3-236ENST00000584991 PTGER4P35408 488 aa12.94□□□□□ -0.34
CDK5RAP3-236ENST00000584991 NPY4RP50391 375 aa12.94□□□□□ -0.34
CDK5RAP3-236ENST00000584991 SUPT4H1P63272 117 aaKnown RBP12.94□□□□□ -0.34
CDK5RAP3-236ENST00000584991 ATXN7L3Q14CW9 347 aaPredicted RBP12.94□□□□□ -0.34
CDK5RAP3-236ENST00000584991 CHRFAM7AQ494W8 412 aa12.94□□□□□ -0.34
CDK5RAP3-236ENST00000584991 BEX5Q5H9J7 111 aa12.94□□□□□ -0.34
CDK5RAP3-236ENST00000584991 VWA1Q6PCB0 445 aa12.94□□□□□ -0.34
CDK5RAP3-236ENST00000584991 SKA3Q8IX90 412 aa12.94□□□□□ -0.34
CDK5RAP3-236ENST00000584991 RPRMLQ8N4K4 120 aa12.94□□□□□ -0.34
CDK5RAP3-236ENST00000584991 CSNK2A3Q8NEV1 391 aa12.94□□□□□ -0.34
CDK5RAP3-236ENST00000584991 SPSB1Q96BD6 273 aa12.94□□□□□ -0.34
CDK5RAP3-236ENST00000584991 SPACA5Q96QH8 159 aa12.94□□□□□ -0.34
CDK5RAP3-236ENST00000584991 NKX6-2Q9C056 277 aaPredicted RBP12.94□□□□□ -0.34
CDK5RAP3-236ENST00000584991 CYTL1Q9NRR1 136 aa12.94□□□□□ -0.34
CDK5RAP3-236ENST00000584991 C1orf123Q9NWV4 160 aa12.94□□□□□ -0.34
CDK5RAP3-236ENST00000584991 HSF4Q9ULV5 492 aa12.94□□□□□ -0.34
CDK5RAP3-236ENST00000584991 ZZEF1O43149 2961 aa12.94□□□□□ -0.34
CDK5RAP3-236ENST00000584991 A0A096LPE4 126 aa12.93□□□□□ -0.34
CDK5RAP3-236ENST00000584991 A0A1W2PPZ6 126 aa12.93□□□□□ -0.34
CDK5RAP3-236ENST00000584991 DNASE2O00115 360 aaPredicted RBP12.93□□□□□ -0.34
CDK5RAP3-236ENST00000584991 FARS2O95363 451 aaKnown RBP12.93□□□□□ -0.34
CDK5RAP3-236ENST00000584991 H2AFB1P0C5Y9 115 aa12.93□□□□□ -0.34
CDK5RAP3-236ENST00000584991 CRIP3Q6Q6R5 217 aa12.93□□□□□ -0.34
CDK5RAP3-236ENST00000584991 CLRN3Q8NCR9 226 aa12.93□□□□□ -0.34
CDK5RAP3-236ENST00000584991 OR13G1Q8NGZ3 307 aa12.93□□□□□ -0.34
CDK5RAP3-236ENST00000584991 FGFBP3Q8TAT2 258 aa12.93□□□□□ -0.34
CDK5RAP3-236ENST00000584991 METTL8Q9H825 291 aaKnown RBP12.93□□□□□ -0.34
CDK5RAP3-236ENST00000584991 MMP26Q9NRE1 261 aa12.93□□□□□ -0.34
CDK5RAP3-236ENST00000584991 PLEK2Q9NYT0 353 aa12.93□□□□□ -0.34
CDK5RAP3-236ENST00000584991 MAP1BP46821 2468 aaKnown RBP12.93□□□□□ -0.34
CDK5RAP3-236ENST00000584991 INTS1Q8N201 2190 aaKnown RBP12.93□□□□□ -0.34
CDK5RAP3-236ENST00000584991 CSTBP04080 98 aaKnown RBP12.93□□□□□ -0.34
CDK5RAP3-236ENST00000584991 ZNF32P17041 273 aa12.93□□□□□ -0.34
CDK5RAP3-236ENST00000584991 NRN1LQ496H8 165 aa12.93□□□□□ -0.34
CDK5RAP3-236ENST00000584991 PABPC1L2AQ5JQF8 200 aa12.93□□□□□ -0.34
CDK5RAP3-236ENST00000584991 NKAPLQ5M9Q1 402 aa12.93□□□□□ -0.34
CDK5RAP3-236ENST00000584991 ZSCAN4Q8NAM6 433 aaPredicted RBP12.93□□□□□ -0.34
CDK5RAP3-236ENST00000584991 OR1S2Q8NGQ3 325 aa12.93□□□□□ -0.34
CDK5RAP3-236ENST00000584991 LYZL4Q96KX0 146 aa12.93□□□□□ -0.34
CDK5RAP3-236ENST00000584991 SOX7Q9BT81 388 aa12.93□□□□□ -0.34
CDK5RAP3-236ENST00000584991 MS4A7Q9GZW8 240 aaPredicted RBP12.93□□□□□ -0.34
CDK5RAP3-236ENST00000584991 PCDHB16Q9NRJ7 776 aa12.93□□□□□ -0.34
CDK5RAP3-236ENST00000584991 EHFQ9NZC4 300 aa12.93□□□□□ -0.34
CDK5RAP3-236ENST00000584991 DSPP15924 2871 aaKnown RBP12.92□□□□□ -0.34
CDK5RAP3-236ENST00000584991 PRRG2O14669 202 aa12.92□□□□□ -0.34
CDK5RAP3-236ENST00000584991 SGCEO43556 437 aa12.92□□□□□ -0.34
CDK5RAP3-236ENST00000584991 TSPAN9O75954 239 aa12.92□□□□□ -0.34
CDK5RAP3-236ENST00000584991 RPS2P15880 293 aaKnown RBP12.92□□□□□ -0.34
CDK5RAP3-236ENST00000584991 DEFA5Q01523 94 aa12.92□□□□□ -0.34
CDK5RAP3-236ENST00000584991 SCRN3Q0VDG4 424 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms