RNA–Protein interactions for RNA: ENST00000584525.5

CDK5RAP3-234, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 530 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-234	ENST00000584525	FAM192A	Q9GZU8	254 aa		10.81	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	RASSF4	Q9H2L5	321 aa		10.81	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	ELL3	Q9HB65	397 aa	Predicted RBP	10.81	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	KAAG1	Q9UBP8	84 aa		10.81	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	CTSZ	Q9UBR2	303 aa		10.81	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	SLC25A10	Q9UBX3	287 aa	Predicted RBP	10.81	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	GPR137B	O60478	399 aa		10.8	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	CLPX	O76031	633 aa		10.8	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	CEL	P19835	753 aa		10.8	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	C21orf33	P30042	268 aa	Predicted RBP	10.8	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	RPL15	P61313	204 aa	Known RBP	10.8	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	BLMH	Q13867	455 aa		10.8	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	YIF1B	Q5BJH7	314 aa		10.8	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	RBM48	Q5RL73	367 aa	Known RBP	10.8	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	BTN2A1	Q7KYR7	527 aa		10.8	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	CALHM1	Q8IU99	346 aa		10.8	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	ASCC1	Q8N9N2	400 aa	Known RBP	10.8	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	GHSR	Q92847	366 aa		10.8	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	LHX4	Q969G2	390 aa		10.8	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	WDFY2	Q96P53	400 aa		10.8	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	TBX15	Q96SF7	602 aa		10.8	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	ZNF184	Q99676	751 aa	Predicted RBP	10.8	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	ZNF649	Q9BS31	505 aa		10.8	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	SMURF1	Q9HCE7	757 aa		10.8	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	ONECUT1	Q9UBC0	465 aa		10.8	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	IGHV1-69D	A0A0B4J2H0	117 aa		10.79	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525		A0A1W2PPH5	198 aa		10.79	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	RFPL4A	A6NLU0	287 aa		10.79	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	RFPL4AL1	F8VTS6	287 aa		10.79	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	OGG1	O15527	345 aa		10.79	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	TSPAN15	O95858	294 aa		10.79	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	IGHV1-69	P01742	117 aa		10.79	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	IGHV4-59	P01825	116 aa		10.79	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	HSMCR30	P0CW71	290 aa		10.79	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	TMEM225B	P0DP42	221 aa		10.79	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	PSG2	P11465	335 aa		10.79	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	MMP9	P14780	707 aa		10.79	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	PRKACA	P17612	351 aa		10.79	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	MPZ	P25189	248 aa		10.79	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	MAPK3	P27361	379 aa	Predicted RBP	10.79	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	SNU13	P55769	128 aa	Known RBP	10.79	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	PROK1	P58294	105 aa		10.79	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	C11orf91	Q3C1V1	193 aa		10.79	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525		Q499Y3	187 aa		10.79	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	XAF1	Q6GPH4	301 aa		10.79	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	PARP16	Q8N5Y8	322 aa		10.79	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	NANOGP1	Q8N7R0	232 aa		10.79	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	10.79	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	OR5D18	Q8NGL1	313 aa		10.79	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	ANGPTL6	Q8NI99	470 aa		10.79	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	PPP1R35	Q8TAP8	253 aa		10.79	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	UFD1	Q92890	307 aa		10.79	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	TAS2R4	Q9NYW5	299 aa		10.79	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525		A0A0U1RQK1	487 aa		10.78	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	10.78	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	SIGLEC5	O15389	551 aa		10.78	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	NOS1AP	O75052	506 aa	Predicted RBP	10.78	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	ACAA1	P09110	424 aa	Predicted RBP	10.78	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	PRDX2	P32119	198 aa		10.78	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	ARF6	P62330	175 aa		10.78	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	BDH1	Q02338	343 aa		10.78	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	SPHAR	Q15513	63 aa		10.78	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	DDI2	Q5TDH0	399 aa		10.78	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	LAIR2	Q6ISS4	152 aa		10.78	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	ZNF788	Q6ZQV5	615 aa		10.78	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	PDZD9	Q8IXQ8	264 aa		10.78	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	FAM185A	Q8N0U4	392 aa		10.78	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	ZNF561	Q8N587	486 aa		10.78	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	TNFAIP8L1	Q8WVP5	186 aa		10.78	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	RNF166	Q96A37	237 aa	Predicted RBP	10.78	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	GAFA1	Q96PS6	74 aa		10.78	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	SPACA5	Q96QH8	159 aa		10.78	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	NRIP2	Q9BQI9	281 aa		10.78	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	FKBP14	Q9NWM8	211 aa		10.78	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	FAM96B	Q9Y3D0	163 aa		10.78	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	DOCK11	Q5JSL3	2073 aa		10.78	□□□□□ -0.68
CDK5RAP3-234	ENST00000584525	IGKV1-27	A0A075B6S5	117 aa		10.77	□□□□□ -0.69
CDK5RAP3-234	ENST00000584525	IGKV1-9	A0A0C4DH69	117 aa		10.77	□□□□□ -0.69
CDK5RAP3-234	ENST00000584525	LALBA	P00709	142 aa		10.77	□□□□□ -0.69
CDK5RAP3-234	ENST00000584525	MT-ND2	P03891	347 aa		10.77	□□□□□ -0.69
CDK5RAP3-234	ENST00000584525	CHRM2	P08172	466 aa		10.77	□□□□□ -0.69
CDK5RAP3-234	ENST00000584525	BCL3	P20749	454 aa		10.77	□□□□□ -0.69
CDK5RAP3-234	ENST00000584525	GABRR1	P24046	479 aa		10.77	□□□□□ -0.69
CDK5RAP3-234	ENST00000584525	BDKRB2	P30411	391 aa		10.77	□□□□□ -0.69
CDK5RAP3-234	ENST00000584525	IER3	P46695	156 aa		10.77	□□□□□ -0.69
CDK5RAP3-234	ENST00000584525	SLC35A2	P78381	396 aa		10.77	□□□□□ -0.69
CDK5RAP3-234	ENST00000584525	PDZK1IP1	Q13113	114 aa		10.77	□□□□□ -0.69
CDK5RAP3-234	ENST00000584525	KISS1	Q15726	138 aa		10.77	□□□□□ -0.69
CDK5RAP3-234	ENST00000584525	ATPAF1	Q5TC12	328 aa	Predicted RBP	10.77	□□□□□ -0.69
CDK5RAP3-234	ENST00000584525	DMKN	Q6E0U4	476 aa	Predicted RBP	10.77	□□□□□ -0.69
CDK5RAP3-234	ENST00000584525	GDPGP1	Q6ZNW5	385 aa		10.77	□□□□□ -0.69
CDK5RAP3-234	ENST00000584525	GDPD3	Q7L5L3	318 aa		10.77	□□□□□ -0.69
CDK5RAP3-234	ENST00000584525	FAM58A	Q8N1B3	248 aa		10.77	□□□□□ -0.69
CDK5RAP3-234	ENST00000584525	OR13C5	Q8NGS8	318 aa		10.77	□□□□□ -0.69
CDK5RAP3-234	ENST00000584525	CDCA4	Q9BXL8	241 aa		10.77	□□□□□ -0.69
CDK5RAP3-234	ENST00000584525	DPAGT1	Q9H3H5	408 aa		10.77	□□□□□ -0.69
CDK5RAP3-234	ENST00000584525	CNTD2	Q9H8S5	307 aa		10.77	□□□□□ -0.69
CDK5RAP3-234	ENST00000584525	EXOSC4	Q9NPD3	245 aa	Known RBP	10.77	□□□□□ -0.69
CDK5RAP3-234	ENST00000584525	RPUSD1	Q9UJJ7	312 aa	Known RBP	10.77	□□□□□ -0.69
CDK5RAP3-234	ENST00000584525	IGKV1D-17	A0A075B6S4	117 aa		10.76	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms