RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 LRP12Q9Y561 859 aa6.27□□□□□ -1.41
SMCHD1-210ENST00000583800 FAM90A8PA6NJQ4 464 aa6.26□□□□□ -1.41
SMCHD1-210ENST00000583800 ODF3BA8MYP8 253 aa6.26□□□□□ -1.41
SMCHD1-210ENST00000583800 H3BN98 237 aa6.26□□□□□ -1.41
SMCHD1-210ENST00000583800 PSMD9O00233 223 aa6.26□□□□□ -1.41
SMCHD1-210ENST00000583800 SLC1A7O00341 560 aa6.26□□□□□ -1.41
SMCHD1-210ENST00000583800 SYNGR1O43759 233 aa6.26□□□□□ -1.41
SMCHD1-210ENST00000583800 ARG1P05089 322 aa6.26□□□□□ -1.41
SMCHD1-210ENST00000583800 PAICSP22234 425 aaKnown RBP6.26□□□□□ -1.41
SMCHD1-210ENST00000583800 VDAC2P45880 294 aaPredicted RBP6.26□□□□□ -1.41
SMCHD1-210ENST00000583800 DLX6P56179 175 aa6.26□□□□□ -1.41
SMCHD1-210ENST00000583800 BLCAPP62952 87 aa6.26□□□□□ -1.41
SMCHD1-210ENST00000583800 SSX2Q16385 188 aa6.26□□□□□ -1.41
SMCHD1-210ENST00000583800 MICAQ29983 383 aa6.26□□□□□ -1.41
SMCHD1-210ENST00000583800 SMIM21Q3B7S5 101 aa6.26□□□□□ -1.41
SMCHD1-210ENST00000583800 TRPM8Q7Z2W7 1104 aa6.26□□□□□ -1.41
SMCHD1-210ENST00000583800 ZNF561Q8N587 486 aa6.26□□□□□ -1.41
SMCHD1-210ENST00000583800 OR10G2Q8NGC3 310 aa6.26□□□□□ -1.41
SMCHD1-210ENST00000583800 OR2T27Q8NH04 317 aa6.26□□□□□ -1.41
SMCHD1-210ENST00000583800 RPS4Y2Q8TD47 263 aa6.26□□□□□ -1.41
SMCHD1-210ENST00000583800 TTTY10Q9BZA0 68 aa6.26□□□□□ -1.41
SMCHD1-210ENST00000583800 PRSS22Q9GZN4 317 aa6.26□□□□□ -1.41
SMCHD1-210ENST00000583800 C1orf21Q9H246 121 aa6.26□□□□□ -1.41
SMCHD1-210ENST00000583800 REEP1Q9H902 201 aa6.26□□□□□ -1.41
SMCHD1-210ENST00000583800 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.26□□□□□ -1.41
SMCHD1-210ENST00000583800 ABCB10Q9NRK6 738 aa6.26□□□□□ -1.41
SMCHD1-210ENST00000583800 C19orf73Q9NVV2 129 aa6.26□□□□□ -1.41
SMCHD1-210ENST00000583800 FAM206AQ9NX38 181 aa6.26□□□□□ -1.41
SMCHD1-210ENST00000583800 FAM30AQ9NZY2 134 aa6.26□□□□□ -1.41
SMCHD1-210ENST00000583800 OR14J1Q9UGF5 321 aa6.26□□□□□ -1.41
SMCHD1-210ENST00000583800 PLA2G2DQ9UNK4 145 aa6.26□□□□□ -1.41
SMCHD1-210ENST00000583800 SAMHD1Q9Y3Z3 626 aaKnown RBP6.26□□□□□ -1.41
SMCHD1-210ENST00000583800 COL7A1Q02388 2944 aa6.26□□□□□ -1.41
SMCHD1-210ENST00000583800 KIAA2026Q5HYC2 2103 aa6.26□□□□□ -1.41
SMCHD1-210ENST00000583800 hCG_1809904A0A1W2PP81 198 aa6.25□□□□□ -1.41
SMCHD1-210ENST00000583800 A0A1W2PPE2 198 aa6.25□□□□□ -1.41
SMCHD1-210ENST00000583800 A0A1W2PR64 198 aa6.25□□□□□ -1.41
SMCHD1-210ENST00000583800 A0A1W2PRV1 198 aa6.25□□□□□ -1.41
SMCHD1-210ENST00000583800 OR5B21A6NL26 309 aa6.25□□□□□ -1.41
SMCHD1-210ENST00000583800 C17orf98A8MV24 154 aa6.25□□□□□ -1.41
SMCHD1-210ENST00000583800 PRR32B1ATL7 298 aa6.25□□□□□ -1.41
SMCHD1-210ENST00000583800 PRR23D1E9PI22 279 aaPredicted RBP6.25□□□□□ -1.41
SMCHD1-210ENST00000583800 J3QT63 122 aa6.25□□□□□ -1.41
SMCHD1-210ENST00000583800 PGA5P0DJD9 388 aa6.25□□□□□ -1.41
SMCHD1-210ENST00000583800 PRR23D2P0DMB1 279 aaPredicted RBP6.25□□□□□ -1.41
SMCHD1-210ENST00000583800 PRDX2P32119 198 aa6.25□□□□□ -1.41
SMCHD1-210ENST00000583800 HAAOP46952 286 aa6.25□□□□□ -1.41
SMCHD1-210ENST00000583800 HCCSP53701 268 aa6.25□□□□□ -1.41
SMCHD1-210ENST00000583800 RPS7P62081 194 aaKnown RBP6.25□□□□□ -1.41
SMCHD1-210ENST00000583800 ZNF626Q68DY1 528 aa6.25□□□□□ -1.41
SMCHD1-210ENST00000583800 OR2T5Q6IEZ7 315 aa6.25□□□□□ -1.41
SMCHD1-210ENST00000583800 ZNF529Q6P280 563 aa6.25□□□□□ -1.41
SMCHD1-210ENST00000583800 DEFB107AQ8IZN7 70 aa6.25□□□□□ -1.41
SMCHD1-210ENST00000583800 BBS1Q8NFJ9 593 aa6.25□□□□□ -1.41
SMCHD1-210ENST00000583800 OR5A2Q8NGI9 324 aa6.25□□□□□ -1.41
SMCHD1-210ENST00000583800 OR2T29Q8NH02 315 aa6.25□□□□□ -1.41
SMCHD1-210ENST00000583800 OR51E1Q8TCB6 317 aa6.25□□□□□ -1.41
SMCHD1-210ENST00000583800 ABHD5Q8WTS1 349 aa6.25□□□□□ -1.41
SMCHD1-210ENST00000583800 OR8B4Q96RC9 309 aa6.25□□□□□ -1.41
SMCHD1-210ENST00000583800 FAM107BQ9H098 131 aa6.25□□□□□ -1.41
SMCHD1-210ENST00000583800 PLEKHA2Q9HB19 425 aa6.25□□□□□ -1.41
SMCHD1-210ENST00000583800 GPR84Q9NQS5 396 aa6.25□□□□□ -1.41
SMCHD1-210ENST00000583800 GPR173Q9NS66 373 aa6.25□□□□□ -1.41
SMCHD1-210ENST00000583800 ARL8BQ9NVJ2 186 aa6.25□□□□□ -1.41
SMCHD1-210ENST00000583800 MRPS18AQ9NVS2 196 aaKnown RBP6.25□□□□□ -1.41
SMCHD1-210ENST00000583800 ZNF446Q9NWS9 450 aa6.25□□□□□ -1.41
SMCHD1-210ENST00000583800 RASL12Q9NYN1 266 aa6.25□□□□□ -1.41
SMCHD1-210ENST00000583800 PITPNC1Q9UKF7 332 aa6.25□□□□□ -1.41
SMCHD1-210ENST00000583800 PIGLQ9Y2B2 252 aa6.25□□□□□ -1.41
SMCHD1-210ENST00000583800 TBL2Q9Y4P3 447 aaKnown RBP6.25□□□□□ -1.41
SMCHD1-210ENST00000583800 A0A0U1RQV5 110 aa6.24□□□□□ -1.41
SMCHD1-210ENST00000583800 TMEM269A0A1B0GVZ9 245 aa6.24□□□□□ -1.41
SMCHD1-210ENST00000583800 WI2-2373I1.2A0A1W2PRP0 233 aa6.24□□□□□ -1.41
SMCHD1-210ENST00000583800 TSPAN4O14817 238 aa6.24□□□□□ -1.41
SMCHD1-210ENST00000583800 NXPH2O95156 264 aa6.24□□□□□ -1.41
SMCHD1-210ENST00000583800 NRASP01111 189 aa6.24□□□□□ -1.41
SMCHD1-210ENST00000583800 IGLV3-1P01715 115 aa6.24□□□□□ -1.41
SMCHD1-210ENST00000583800 MRPL3P09001 348 aaKnown RBP6.24□□□□□ -1.41
SMCHD1-210ENST00000583800 ATP6V1B1P15313 513 aa6.24□□□□□ -1.41
SMCHD1-210ENST00000583800 ALOX5APP20292 161 aa6.24□□□□□ -1.41
SMCHD1-210ENST00000583800 EDDM3BP56851 147 aa6.24□□□□□ -1.41
SMCHD1-210ENST00000583800 KRTAP10-11P60412 298 aa6.24□□□□□ -1.41
SMCHD1-210ENST00000583800 SLC35A2P78381 396 aa6.24□□□□□ -1.41
SMCHD1-210ENST00000583800 SLC34A1Q06495 639 aa6.24□□□□□ -1.41
SMCHD1-210ENST00000583800 MFGE8Q08431 387 aaPredicted RBP6.24□□□□□ -1.41
SMCHD1-210ENST00000583800 RIPPLY1Q0D2K3 151 aa6.24□□□□□ -1.41
SMCHD1-210ENST00000583800 DYNC1I2Q13409 638 aaKnown RBP6.24□□□□□ -1.41
SMCHD1-210ENST00000583800 DCTN2Q13561 401 aaKnown RBP6.24□□□□□ -1.41
SMCHD1-210ENST00000583800 FHL3Q13643 280 aa6.24□□□□□ -1.41
SMCHD1-210ENST00000583800 GINS1Q14691 196 aa6.24□□□□□ -1.41
SMCHD1-210ENST00000583800 ZNF684Q5T5D7 378 aa6.24□□□□□ -1.41
SMCHD1-210ENST00000583800 C16orf89Q6UX73 402 aa6.24□□□□□ -1.41
SMCHD1-210ENST00000583800 LCNL1Q6ZST4 164 aa6.24□□□□□ -1.41
SMCHD1-210ENST00000583800 CCDC121Q6ZUS5 278 aa6.24□□□□□ -1.41
SMCHD1-210ENST00000583800 TCF23Q7RTU1 214 aa6.24□□□□□ -1.41
SMCHD1-210ENST00000583800 ASCC1Q8N9N2 400 aaKnown RBP6.24□□□□□ -1.41
SMCHD1-210ENST00000583800 WFDC9Q8NEX5 89 aa6.24□□□□□ -1.41
SMCHD1-210ENST00000583800 OR5AU1Q8NGC0 362 aa6.24□□□□□ -1.41
SMCHD1-210ENST00000583800 OR13D1Q8NGV5 346 aa6.24□□□□□ -1.41
SMCHD1-210ENST00000583800 MALSU1Q96EH3 234 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms