RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 TMEM100Q9NV29 134 aa11.85□□□□□ -0.51
SRSF1-205ENST00000582730 ANAPC10Q9UM13 185 aa11.85□□□□□ -0.51
SRSF1-205ENST00000582730 DHRS7CA6NNS2 312 aa11.85□□□□□ -0.51
SRSF1-205ENST00000582730 HEXAP06865 529 aa11.85□□□□□ -0.51
SRSF1-205ENST00000582730 EDN3P14138 238 aa11.85□□□□□ -0.51
SRSF1-205ENST00000582730 CBR1P16152 277 aa11.85□□□□□ -0.51
SRSF1-205ENST00000582730 HLA-GP17693 338 aa11.85□□□□□ -0.51
SRSF1-205ENST00000582730 FPR2P25090 351 aa11.85□□□□□ -0.51
SRSF1-205ENST00000582730 MEOX1P50221 254 aa11.85□□□□□ -0.51
SRSF1-205ENST00000582730 ARL6IP1Q15041 203 aa11.85□□□□□ -0.51
SRSF1-205ENST00000582730 LHFPL2Q6ZUX7 228 aa11.85□□□□□ -0.51
SRSF1-205ENST00000582730 FBXL14Q8N1E6 418 aa11.85□□□□□ -0.51
SRSF1-205ENST00000582730 CHMP1AQ9HD42 196 aaPredicted RBP11.85□□□□□ -0.51
SRSF1-205ENST00000582730 ACKR4Q9NPB9 350 aa11.85□□□□□ -0.51
SRSF1-205ENST00000582730 hCG_38984A0A1B0GV85 526 aa11.84□□□□□ -0.51
SRSF1-205ENST00000582730 C5orf49A4QMS7 147 aa11.84□□□□□ -0.51
SRSF1-205ENST00000582730 ARGFXA6NJG6 315 aa11.84□□□□□ -0.51
SRSF1-205ENST00000582730 ZNF850A8MQ14 1090 aa11.84□□□□□ -0.51
SRSF1-205ENST00000582730 FOXI3A8MTJ6 420 aaPredicted RBP11.84□□□□□ -0.51
SRSF1-205ENST00000582730 GEMIN2O14893 280 aaKnown RBP11.84□□□□□ -0.51
SRSF1-205ENST00000582730 TPT1P13693 172 aaKnown RBP11.84□□□□□ -0.51
SRSF1-205ENST00000582730 HABP2Q14520 560 aaPredicted RBP11.84□□□□□ -0.51
SRSF1-205ENST00000582730 BAP18Q8IXM2 172 aa11.84□□□□□ -0.51
SRSF1-205ENST00000582730 RNF141Q8WVD5 230 aa11.84□□□□□ -0.51
SRSF1-205ENST00000582730 EMG1Q92979 244 aaKnown RBP11.84□□□□□ -0.51
SRSF1-205ENST00000582730 ZNF2Q9BSG1 426 aaPredicted RBP11.84□□□□□ -0.51
SRSF1-205ENST00000582730 PAPOLGQ9BWT3 736 aaKnown RBP11.84□□□□□ -0.51
SRSF1-205ENST00000582730 DEFB127Q9H1M4 99 aa11.84□□□□□ -0.51
SRSF1-205ENST00000582730 C12orf49Q9H741 205 aa11.84□□□□□ -0.51
SRSF1-205ENST00000582730 PARPBPQ9NWS1 579 aa11.84□□□□□ -0.51
SRSF1-205ENST00000582730 A0A0B4J2A0 478 aa11.84□□□□□ -0.51
SRSF1-205ENST00000582730 F8VVB4 439 aa11.84□□□□□ -0.51
SRSF1-205ENST00000582730 F8VWA3 439 aa11.84□□□□□ -0.51
SRSF1-205ENST00000582730 MMP7P09237 267 aaPredicted RBP11.84□□□□□ -0.51
SRSF1-205ENST00000582730 AADACL3Q5VUY0 350 aa11.84□□□□□ -0.51
SRSF1-205ENST00000582730 ZNF100Q8IYN0 542 aa11.84□□□□□ -0.51
SRSF1-205ENST00000582730 OR51F2Q8NH61 342 aa11.84□□□□□ -0.51
SRSF1-205ENST00000582730 STOML3Q8TAV4 291 aa11.84□□□□□ -0.51
SRSF1-205ENST00000582730 DCUN1D4Q92564 292 aa11.84□□□□□ -0.51
SRSF1-205ENST00000582730 OR51B6Q9H340 312 aa11.84□□□□□ -0.51
SRSF1-205ENST00000582730 MMP26Q9NRE1 261 aa11.84□□□□□ -0.51
SRSF1-205ENST00000582730 SHPKQ9UHJ6 478 aa11.84□□□□□ -0.51
SRSF1-205ENST00000582730 AK3Q9UIJ7 227 aa11.84□□□□□ -0.51
SRSF1-205ENST00000582730 C14orf166Q9Y224 244 aaKnown RBP11.84□□□□□ -0.51
SRSF1-205ENST00000582730 CSAG2Q9Y5P2 127 aa11.84□□□□□ -0.51
SRSF1-205ENST00000582730 DOCK7Q96N67 2140 aa11.84□□□□□ -0.51
SRSF1-205ENST00000582730 CACNA1HO95180 2353 aa11.84□□□□□ -0.51
SRSF1-205ENST00000582730 COLCA2A8K830 154 aa11.84□□□□□ -0.51
SRSF1-205ENST00000582730 SFT2D2O95562 160 aa11.84□□□□□ -0.51
SRSF1-205ENST00000582730 HOXB5P09067 269 aa11.84□□□□□ -0.51
SRSF1-205ENST00000582730 Q6ZSR3 168 aa11.84□□□□□ -0.51
SRSF1-205ENST00000582730 ZSCAN4Q8NAM6 433 aaPredicted RBP11.84□□□□□ -0.51
SRSF1-205ENST00000582730 SLC30A7Q8NEW0 376 aa11.84□□□□□ -0.51
SRSF1-205ENST00000582730 ADAMTS17Q8TE56 1095 aa11.84□□□□□ -0.51
SRSF1-205ENST00000582730 TOMM40LQ969M1 308 aa11.84□□□□□ -0.51
SRSF1-205ENST00000582730 APH1AQ96BI3 265 aa11.84□□□□□ -0.51
SRSF1-205ENST00000582730 RTBDNQ9BSG5 229 aaPredicted RBP11.84□□□□□ -0.51
SRSF1-205ENST00000582730 GSKIPQ9P0R6 139 aa11.84□□□□□ -0.51
SRSF1-205ENST00000582730 IGKV1-12A0A0C4DH73 117 aa11.83□□□□□ -0.52
SRSF1-205ENST00000582730 ZNF816-ZNF321PA0A0X1KG74 233 aa11.83□□□□□ -0.52
SRSF1-205ENST00000582730 FIGNL2A6NMB9 653 aa11.83□□□□□ -0.52
SRSF1-205ENST00000582730 IGKV1D-12P01611 117 aa11.83□□□□□ -0.52
SRSF1-205ENST00000582730 ZNF708P17019 499 aa11.83□□□□□ -0.52
SRSF1-205ENST00000582730 SPINK2P20155 84 aa11.83□□□□□ -0.52
SRSF1-205ENST00000582730 PJVKQ0ZLH3 352 aa11.83□□□□□ -0.52
SRSF1-205ENST00000582730 PEA15Q15121 130 aa11.83□□□□□ -0.52
SRSF1-205ENST00000582730 MST1LQ2TV78 715 aa11.83□□□□□ -0.52
SRSF1-205ENST00000582730 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.83□□□□□ -0.52
SRSF1-205ENST00000582730 FOXRED2Q8IWF2 684 aa11.83□□□□□ -0.52
SRSF1-205ENST00000582730 TMEM45BQ96B21 275 aa11.83□□□□□ -0.52
SRSF1-205ENST00000582730 FER1L6-AS2Q96M78 137 aa11.83□□□□□ -0.52
SRSF1-205ENST00000582730 RGCCQ9H4X1 137 aa11.83□□□□□ -0.52
SRSF1-205ENST00000582730 RYDENQ9NUL5 291 aaKnown RBP11.83□□□□□ -0.52
SRSF1-205ENST00000582730 OSGIN2Q9Y236 505 aa11.83□□□□□ -0.52
SRSF1-205ENST00000582730 ST3GAL6Q9Y274 331 aa11.83□□□□□ -0.52
SRSF1-205ENST00000582730 EP300Q09472 2414 aaPredicted RBP11.83□□□□□ -0.52
SRSF1-205ENST00000582730 XRCC2O43543 280 aa11.83□□□□□ -0.52
SRSF1-205ENST00000582730 S100A9P06702 114 aaKnown RBP11.83□□□□□ -0.52
SRSF1-205ENST00000582730 SFTPBP07988 381 aa11.83□□□□□ -0.52
SRSF1-205ENST00000582730 SP1P08047 785 aa11.83□□□□□ -0.52
SRSF1-205ENST00000582730 FAM157CP0CG43 387 aa11.83□□□□□ -0.52
SRSF1-205ENST00000582730 SMIM6P0DI80 62 aa11.83□□□□□ -0.52
SRSF1-205ENST00000582730 RAB5BP61020 215 aa11.83□□□□□ -0.52
SRSF1-205ENST00000582730 RBM39Q14498 530 aaKnown RBP11.83□□□□□ -0.52
SRSF1-205ENST00000582730 RPUSD3Q6P087 351 aaKnown RBP11.83□□□□□ -0.52
SRSF1-205ENST00000582730 OR56B2PQ8NGI1 322 aa11.83□□□□□ -0.52
SRSF1-205ENST00000582730 NRIP2Q9BQI9 281 aa11.83□□□□□ -0.52
SRSF1-205ENST00000582730 SULT4A1Q9BR01 284 aa11.83□□□□□ -0.52
SRSF1-205ENST00000582730 NIT2Q9NQR4 276 aa11.83□□□□□ -0.52
SRSF1-205ENST00000582730 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.83□□□□□ -0.52
SRSF1-205ENST00000582730 RCC2Q9P258 522 aaKnown RBP11.83□□□□□ -0.52
SRSF1-205ENST00000582730 LIPGQ9Y5X9 500 aa11.83□□□□□ -0.52
SRSF1-205ENST00000582730 PCNX2A6NKB5 2137 aa11.83□□□□□ -0.52
SRSF1-205ENST00000582730 TERTO14746 1132 aaKnown RBP11.82□□□□□ -0.52
SRSF1-205ENST00000582730 MUC1P15941 1255 aaPredicted RBP11.82□□□□□ -0.52
SRSF1-205ENST00000582730 PSMB6P28072 239 aa11.82□□□□□ -0.52
SRSF1-205ENST00000582730 ARG2P78540 354 aa11.82□□□□□ -0.52
SRSF1-205ENST00000582730 ANKRD55Q3KP44 614 aa11.82□□□□□ -0.52
SRSF1-205ENST00000582730 SLC25A26Q70HW3 274 aa11.82□□□□□ -0.52
SRSF1-205ENST00000582730 OSR2Q8N2R0 312 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms