RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 USP9YO00507 2555 aaPredicted RBP12.48□□□□□ -0.41
MKS1-211ENST00000581761 UBE2QL1A1L167 161 aa12.48□□□□□ -0.41
MKS1-211ENST00000581761 LRP5LA4QPB2 252 aa12.48□□□□□ -0.41
MKS1-211ENST00000581761 FAM90A10PA6NDY2 464 aa12.48□□□□□ -0.41
MKS1-211ENST00000581761 FAM90A18PA6NE21 464 aa12.48□□□□□ -0.41
MKS1-211ENST00000581761 FAM90A16PA6NEW6 464 aa12.48□□□□□ -0.41
MKS1-211ENST00000581761 FAM90A20PA6NIJ5 464 aa12.48□□□□□ -0.41
MKS1-211ENST00000581761 FAM90A8PA6NJQ4 464 aa12.48□□□□□ -0.41
MKS1-211ENST00000581761 FAM90A7PA6NKC0 464 aa12.48□□□□□ -0.41
MKS1-211ENST00000581761 FAM90A22PA8MWA6 464 aa12.48□□□□□ -0.41
MKS1-211ENST00000581761 SNRPGP15A8MWD9 76 aa12.48□□□□□ -0.41
MKS1-211ENST00000581761 FAM90A12PA8MX19 464 aa12.48□□□□□ -0.41
MKS1-211ENST00000581761 FAM90A5PA8MXJ8 464 aa12.48□□□□□ -0.41
MKS1-211ENST00000581761 FAM90A23PA8MXZ1 464 aa12.48□□□□□ -0.41
MKS1-211ENST00000581761 TIMM8AO60220 97 aaPredicted RBP12.48□□□□□ -0.41
MKS1-211ENST00000581761 CREBL2O60519 120 aaPredicted RBP12.48□□□□□ -0.41
MKS1-211ENST00000581761 OR7C1O76099 320 aaPredicted RBP12.48□□□□□ -0.41
MKS1-211ENST00000581761 FAM90A15PP0C7V4 464 aa12.48□□□□□ -0.41
MKS1-211ENST00000581761 FAM90A13PP0C7W8 464 aa12.48□□□□□ -0.41
MKS1-211ENST00000581761 FAM90A14PP0C7W9 464 aa12.48□□□□□ -0.41
MKS1-211ENST00000581761 FAM90A24PP0C7X0 464 aa12.48□□□□□ -0.41
MKS1-211ENST00000581761 SULT1A3P0DMM9 295 aa12.48□□□□□ -0.41
MKS1-211ENST00000581761 SULT1A4P0DMN0 295 aa12.48□□□□□ -0.41
MKS1-211ENST00000581761 TAS2R46P59540 309 aa12.48□□□□□ -0.41
MKS1-211ENST00000581761 FAM27E3Q08E93 113 aa12.48□□□□□ -0.41
MKS1-211ENST00000581761 IL24Q13007 206 aa12.48□□□□□ -0.41
MKS1-211ENST00000581761 C3orf36Q3SXR2 165 aa12.48□□□□□ -0.41
MKS1-211ENST00000581761 ZNF626Q68DY1 528 aa12.48□□□□□ -0.41
MKS1-211ENST00000581761 OR11H7Q8NGC8 314 aa12.48□□□□□ -0.41
MKS1-211ENST00000581761 ZNF442Q9H7R0 627 aa12.48□□□□□ -0.41
MKS1-211ENST00000581761 TMEM100Q9NV29 134 aa12.48□□□□□ -0.41
MKS1-211ENST00000581761 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.47□□□□□ -0.41
MKS1-211ENST00000581761 PRSS44E7EML9 344 aa12.47□□□□□ -0.41
MKS1-211ENST00000581761 F8VVB4 439 aa12.47□□□□□ -0.41
MKS1-211ENST00000581761 F8VWA3 439 aa12.47□□□□□ -0.41
MKS1-211ENST00000581761 PRKACAP17612 351 aa12.47□□□□□ -0.41
MKS1-211ENST00000581761 FUT3P21217 361 aa12.47□□□□□ -0.41
MKS1-211ENST00000581761 KITLGP21583 273 aa12.47□□□□□ -0.41
MKS1-211ENST00000581761 OR3A3P47888 321 aa12.47□□□□□ -0.41
MKS1-211ENST00000581761 CHRFAM7AQ494W8 412 aa12.47□□□□□ -0.41
MKS1-211ENST00000581761 NHLRC3Q5JS37 347 aa12.47□□□□□ -0.41
MKS1-211ENST00000581761 ATPAF1Q5TC12 328 aaPredicted RBP12.47□□□□□ -0.41
MKS1-211ENST00000581761 MBNL2Q5VZF2 373 aaKnown RBP12.47□□□□□ -0.41
MKS1-211ENST00000581761 RGS7BPQ6MZT1 257 aaPredicted RBP12.47□□□□□ -0.41
MKS1-211ENST00000581761 BRICD5Q6PL45 260 aa12.47□□□□□ -0.41
MKS1-211ENST00000581761 TMED4Q7Z7H5 227 aa12.47□□□□□ -0.41
MKS1-211ENST00000581761 C1orf174Q8IYL3 243 aa12.47□□□□□ -0.41
MKS1-211ENST00000581761 ZDHHC22Q8N966 263 aa12.47□□□□□ -0.41
MKS1-211ENST00000581761 OR8G5Q8NG78 346 aa12.47□□□□□ -0.41
MKS1-211ENST00000581761 OR52B4Q8NGK2 314 aa12.47□□□□□ -0.41
MKS1-211ENST00000581761 DYRK2Q92630 601 aa12.47□□□□□ -0.41
MKS1-211ENST00000581761 ZNF488Q96MN9 340 aa12.47□□□□□ -0.41
MKS1-211ENST00000581761 HS3ST6Q96QI5 342 aa12.47□□□□□ -0.41
MKS1-211ENST00000581761 CHST6Q9GZX3 395 aa12.47□□□□□ -0.41
MKS1-211ENST00000581761 ELOVL5Q9NYP7 299 aa12.47□□□□□ -0.41
MKS1-211ENST00000581761 FZR1Q9UM11 496 aa12.47□□□□□ -0.41
MKS1-211ENST00000581761 VSIG4Q9Y279 399 aa12.47□□□□□ -0.41
MKS1-211ENST00000581761 MAST4O15021 2626 aa12.46□□□□□ -0.41
MKS1-211ENST00000581761 TMEM210A6NLX4 147 aa12.46□□□□□ -0.41
MKS1-211ENST00000581761 H0YL77 283 aa12.46□□□□□ -0.41
MKS1-211ENST00000581761 ANXA3P12429 323 aa12.46□□□□□ -0.41
MKS1-211ENST00000581761 DTYMKP23919 212 aa12.46□□□□□ -0.41
MKS1-211ENST00000581761 PMELP40967 661 aa12.46□□□□□ -0.41
MKS1-211ENST00000581761 FABP6P51161 128 aa12.46□□□□□ -0.41
MKS1-211ENST00000581761 ARPC4P59998 168 aa12.46□□□□□ -0.41
MKS1-211ENST00000581761 TSPAN5P62079 268 aa12.46□□□□□ -0.41
MKS1-211ENST00000581761 SRSF1Q07955 248 aaKnown RBP eCLIP12.46□□□□□ -0.41
MKS1-211ENST00000581761 IL13RA2Q14627 380 aa12.46□□□□□ -0.41
MKS1-211ENST00000581761 MPV17LQ2QL34 196 aa12.46□□□□□ -0.41
MKS1-211ENST00000581761 C4orf46Q504U0 113 aa12.46□□□□□ -0.41
MKS1-211ENST00000581761 C1QTNF12Q5T7M4 302 aa12.46□□□□□ -0.41
MKS1-211ENST00000581761 TMEM211Q6ICI0 200 aa12.46□□□□□ -0.41
MKS1-211ENST00000581761 WDR86Q86TI4 376 aa12.46□□□□□ -0.41
MKS1-211ENST00000581761 NOXA1Q86UR1 476 aa12.46□□□□□ -0.41
MKS1-211ENST00000581761 TMEM17Q86X19 198 aa12.46□□□□□ -0.41
MKS1-211ENST00000581761 LIX1LQ8IVB5 337 aa12.46□□□□□ -0.41
MKS1-211ENST00000581761 FAM58AQ8N1B3 248 aa12.46□□□□□ -0.41
MKS1-211ENST00000581761 ARRDC1Q8N5I2 433 aa12.46□□□□□ -0.41
MKS1-211ENST00000581761 ST6GALNAC3Q8NDV1 305 aa12.46□□□□□ -0.41
MKS1-211ENST00000581761 ALX4Q9H161 411 aaPredicted RBP12.46□□□□□ -0.41
MKS1-211ENST00000581761 PPA2Q9H2U2 334 aa12.46□□□□□ -0.41
MKS1-211ENST00000581761 PLK3Q9H4B4 646 aa12.46□□□□□ -0.41
MKS1-211ENST00000581761 EHFQ9NZC4 300 aa12.46□□□□□ -0.41
MKS1-211ENST00000581761 IL36RNQ9UBH0 155 aa12.46□□□□□ -0.41
MKS1-211ENST00000581761 MGAT4CQ9UBM8 478 aa12.46□□□□□ -0.41
MKS1-211ENST00000581761 EDARQ9UNE0 448 aa12.46□□□□□ -0.41
MKS1-211ENST00000581761 SPEF1Q9Y4P9 236 aa12.46□□□□□ -0.41
MKS1-211ENST00000581761 DOPEY2Q9Y3R5 2298 aa12.46□□□□□ -0.42
MKS1-211ENST00000581761 MEIKINA0A087WXM9 373 aa12.45□□□□□ -0.42
MKS1-211ENST00000581761 TRGV8A0A0C4DH27 118 aa12.45□□□□□ -0.42
MKS1-211ENST00000581761 OR2AT4A6NND4 320 aa12.45□□□□□ -0.42
MKS1-211ENST00000581761 SMLR1H3BR10 107 aa12.45□□□□□ -0.42
MKS1-211ENST00000581761 RHBDL1O75783 438 aa12.45□□□□□ -0.42
MKS1-211ENST00000581761 CRYAAP02489 173 aa12.45□□□□□ -0.42
MKS1-211ENST00000581761 FCGR3AP08637 254 aa12.45□□□□□ -0.42
MKS1-211ENST00000581761 CXCL3P19876 107 aa12.45□□□□□ -0.42
MKS1-211ENST00000581761 CASP6P55212 293 aa12.45□□□□□ -0.42
MKS1-211ENST00000581761 IKZF1Q13422 519 aa12.45□□□□□ -0.42
MKS1-211ENST00000581761 C17orf107Q6ZR85 190 aa12.45□□□□□ -0.42
MKS1-211ENST00000581761 LINC00596Q86U02 117 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms