RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 ADAP1O75689 374 aa12.91□□□□□ -0.34
CSNK1D-217ENST00000581241 CA6P23280 308 aa12.91□□□□□ -0.34
CSNK1D-217ENST00000581241 IRF3Q14653 427 aa12.91□□□□□ -0.34
CSNK1D-217ENST00000581241 SMUG1Q53HV7 270 aa12.91□□□□□ -0.34
CSNK1D-217ENST00000581241 THSD4Q6ZMP0 1018 aa12.91□□□□□ -0.34
CSNK1D-217ENST00000581241 ANKRD37Q7Z713 158 aa12.91□□□□□ -0.34
CSNK1D-217ENST00000581241 PLAC1Q9HBJ0 212 aa12.91□□□□□ -0.34
CSNK1D-217ENST00000581241 PRR13Q9NZ81 148 aa12.91□□□□□ -0.34
CSNK1D-217ENST00000581241 ONECUT1Q9UBC0 465 aa12.91□□□□□ -0.34
CSNK1D-217ENST00000581241 ZMIZ1Q9ULJ6 1067 aa12.91□□□□□ -0.34
CSNK1D-217ENST00000581241 DEDDO75618 318 aa12.9□□□□□ -0.34
CSNK1D-217ENST00000581241 PWWP2BQ6NUJ5 590 aa12.9□□□□□ -0.34
CSNK1D-217ENST00000581241 OIT3Q8WWZ8 545 aa12.9□□□□□ -0.34
CSNK1D-217ENST00000581241 DOCK2Q92608 1830 aa12.9□□□□□ -0.34
CSNK1D-217ENST00000581241 TRPM3Q9HCF6 1732 aaPredicted RBP12.9□□□□□ -0.34
CSNK1D-217ENST00000581241 TRDCB7Z8K6 153 aa12.9□□□□□ -0.34
CSNK1D-217ENST00000581241 POLR2GP62487 172 aaKnown RBP eCLIP12.9□□□□□ -0.34
CSNK1D-217ENST00000581241 CHAC2Q8WUX2 184 aa12.9□□□□□ -0.34
CSNK1D-217ENST00000581241 CCR2P41597 374 aa12.9□□□□□ -0.34
CSNK1D-217ENST00000581241 DPPA3Q6W0C5 159 aa12.9□□□□□ -0.34
CSNK1D-217ENST00000581241 OR10G8Q8NGN5 311 aa12.9□□□□□ -0.34
CSNK1D-217ENST00000581241 C11orf94C9JXX5 98 aa12.9□□□□□ -0.34
CSNK1D-217ENST00000581241 CDC42EP2O14613 210 aa12.9□□□□□ -0.34
CSNK1D-217ENST00000581241 PPM1DO15297 605 aa12.9□□□□□ -0.34
CSNK1D-217ENST00000581241 SLC25A30Q5SVS4 291 aa12.9□□□□□ -0.34
CSNK1D-217ENST00000581241 OR8B12Q8NGG6 310 aa12.89□□□□□ -0.35
CSNK1D-217ENST00000581241 FRRS1LQ9P0K9 344 aa12.89□□□□□ -0.35
CSNK1D-217ENST00000581241 ZNF250P15622 560 aa12.89□□□□□ -0.35
CSNK1D-217ENST00000581241 ZXDAP98168 799 aa12.89□□□□□ -0.35
CSNK1D-217ENST00000581241 CST9Q5W186 159 aa12.89□□□□□ -0.35
CSNK1D-217ENST00000581241 SCN7AQ01118 1682 aa12.89□□□□□ -0.35
CSNK1D-217ENST00000581241 C7orf77A4D0Y5 90 aa12.89□□□□□ -0.35
CSNK1D-217ENST00000581241 PDE6DO43924 150 aa12.89□□□□□ -0.35
CSNK1D-217ENST00000581241 FGF14Q92915 247 aa12.89□□□□□ -0.35
CSNK1D-217ENST00000581241 SLC7A10Q9NS82 523 aa12.89□□□□□ -0.35
CSNK1D-217ENST00000581241 ZNF345Q14585 488 aa12.89□□□□□ -0.35
CSNK1D-217ENST00000581241 OR5AU1Q8NGC0 362 aa12.89□□□□□ -0.35
CSNK1D-217ENST00000581241 UBALD1Q8TB05 177 aa12.89□□□□□ -0.35
CSNK1D-217ENST00000581241 SNX22Q96L94 193 aa12.89□□□□□ -0.35
CSNK1D-217ENST00000581241 TECRQ9NZ01 308 aaKnown RBP12.89□□□□□ -0.35
CSNK1D-217ENST00000581241 CRYBA1P05813 215 aa12.89□□□□□ -0.35
CSNK1D-217ENST00000581241 ACAA1P09110 424 aaPredicted RBP12.89□□□□□ -0.35
CSNK1D-217ENST00000581241 GLULP15104 373 aa12.89□□□□□ -0.35
CSNK1D-217ENST00000581241 TNFRSF1AP19438 455 aa12.89□□□□□ -0.35
CSNK1D-217ENST00000581241 LYG1Q8N1E2 194 aa12.89□□□□□ -0.35
CSNK1D-217ENST00000581241 MIOXQ9UGB7 285 aa12.89□□□□□ -0.35
CSNK1D-217ENST00000581241 OPN4Q9UHM6 478 aa12.89□□□□□ -0.35
CSNK1D-217ENST00000581241 SPTY2D1-AS1A0A0U1RR47 76 aa12.88□□□□□ -0.35
CSNK1D-217ENST00000581241 MPZL1O95297 269 aa12.88□□□□□ -0.35
CSNK1D-217ENST00000581241 ZIC1Q15915 447 aa12.88□□□□□ -0.35
CSNK1D-217ENST00000581241 WIPI1Q5MNZ9 446 aaPredicted RBP12.88□□□□□ -0.35
CSNK1D-217ENST00000581241 TGIF2LXQ8IUE1 241 aa12.88□□□□□ -0.35
CSNK1D-217ENST00000581241 LHFPL5Q8TAF8 219 aa12.88□□□□□ -0.35
CSNK1D-217ENST00000581241 ATG101Q9BSB4 218 aa12.88□□□□□ -0.35
CSNK1D-217ENST00000581241 SHROOM3Q8TF72 1996 aa12.88□□□□□ -0.35
CSNK1D-217ENST00000581241 C1QAP02745 245 aa12.88□□□□□ -0.35
CSNK1D-217ENST00000581241 RPL7P18124 248 aaKnown RBP12.88□□□□□ -0.35
CSNK1D-217ENST00000581241 ADAD2Q8NCV1 583 aaKnown RBP12.88□□□□□ -0.35
CSNK1D-217ENST00000581241 NPEPL1Q8NDH3 523 aa12.88□□□□□ -0.35
CSNK1D-217ENST00000581241 MFRPQ9BY79 579 aa12.88□□□□□ -0.35
CSNK1D-217ENST00000581241 A0A1W2PN81 502 aa12.88□□□□□ -0.35
CSNK1D-217ENST00000581241 ZNF32P17041 273 aa12.88□□□□□ -0.35
CSNK1D-217ENST00000581241 OR1C1Q15619 314 aa12.88□□□□□ -0.35
CSNK1D-217ENST00000581241 TMEM196Q5HYL7 178 aa12.88□□□□□ -0.35
CSNK1D-217ENST00000581241 PDPNQ86YL7 162 aa12.88□□□□□ -0.35
CSNK1D-217ENST00000581241 H3BQ15 152 aa12.88□□□□□ -0.35
CSNK1D-217ENST00000581241 FAM87AP0C7U9 286 aa12.88□□□□□ -0.35
CSNK1D-217ENST00000581241 DAOP14920 347 aa12.88□□□□□ -0.35
CSNK1D-217ENST00000581241 ZNF25P17030 456 aaPredicted RBP12.88□□□□□ -0.35
CSNK1D-217ENST00000581241 MICBQ29980 383 aa12.88□□□□□ -0.35
CSNK1D-217ENST00000581241 CAMPP49913 170 aa12.88□□□□□ -0.35
CSNK1D-217ENST00000581241 PABPC1L2AQ5JQF8 200 aa12.88□□□□□ -0.35
CSNK1D-217ENST00000581241 FAM209AQ5JX71 171 aa12.88□□□□□ -0.35
CSNK1D-217ENST00000581241 ABLIM2Q6H8Q1 611 aa12.88□□□□□ -0.35
CSNK1D-217ENST00000581241 RAB24Q969Q5 203 aa12.88□□□□□ -0.35
CSNK1D-217ENST00000581241 DOK5Q9P104 306 aa12.88□□□□□ -0.35
CSNK1D-217ENST00000581241 STAG3L2P0CL84 134 aa12.87□□□□□ -0.35
CSNK1D-217ENST00000581241 EWSR1Q01844 656 aaKnown RBP eCLIP12.87□□□□□ -0.355e-7■■■□□ 15.7
CSNK1D-217ENST00000581241 FAM109BQ6ICB4 259 aaPredicted RBP12.87□□□□□ -0.35
CSNK1D-217ENST00000581241 DYRK2Q92630 601 aa12.87□□□□□ -0.35
CSNK1D-217ENST00000581241 C10orf35Q96D05 121 aa12.87□□□□□ -0.35
CSNK1D-217ENST00000581241 MS4A7Q9GZW8 240 aaPredicted RBP12.87□□□□□ -0.35
CSNK1D-217ENST00000581241 CXXC4Q9H2H0 198 aa12.87□□□□□ -0.35
CSNK1D-217ENST00000581241 ANXA10Q9UJ72 324 aa12.87□□□□□ -0.35
CSNK1D-217ENST00000581241 PITPNC1Q9UKF7 332 aa12.87□□□□□ -0.35
CSNK1D-217ENST00000581241 FUT9Q9Y231 359 aa12.87□□□□□ -0.35
CSNK1D-217ENST00000581241 A6NDN8 102 aa12.87□□□□□ -0.35
CSNK1D-217ENST00000581241 PLA2G10O15496 165 aa12.87□□□□□ -0.35
CSNK1D-217ENST00000581241 DEFB109BQ30KR1 87 aa12.87□□□□□ -0.35
CSNK1D-217ENST00000581241 MESTQ5EB52 335 aa12.87□□□□□ -0.35
CSNK1D-217ENST00000581241 LINC01555Q8NAE3 123 aa12.87□□□□□ -0.35
CSNK1D-217ENST00000581241 NUBPLQ8TB37 319 aa12.87□□□□□ -0.35
CSNK1D-217ENST00000581241 RGP1Q92546 391 aaPredicted RBP12.87□□□□□ -0.35
CSNK1D-217ENST00000581241 OR2A5Q96R48 311 aa12.87□□□□□ -0.35
CSNK1D-217ENST00000581241 GAL3ST2Q9H3Q3 398 aa12.87□□□□□ -0.35
CSNK1D-217ENST00000581241 AMDHD2Q9Y303 409 aa12.87□□□□□ -0.35
CSNK1D-217ENST00000581241 IGHV3-43A0A0B4J1X8 118 aa12.87□□□□□ -0.35
CSNK1D-217ENST00000581241 OR2T8A6NH00 312 aa12.87□□□□□ -0.35
CSNK1D-217ENST00000581241 GEMIN2O14893 280 aaKnown RBP12.87□□□□□ -0.35
CSNK1D-217ENST00000581241 TNFSF15O95150 251 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms