RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 XRCC2O43543 280 aa9.09□□□□□ -0.95
TOP3A-209ENST00000580095 NRASP01111 189 aa9.09□□□□□ -0.95
TOP3A-209ENST00000580095 NR2C1P13056 603 aa9.09□□□□□ -0.95
TOP3A-209ENST00000580095 EIF2S3P41091 472 aaKnown RBP9.09□□□□□ -0.95
TOP3A-209ENST00000580095 ASCL1P50553 236 aa9.09□□□□□ -0.95
TOP3A-209ENST00000580095 PIGPP57054 158 aa9.09□□□□□ -0.95
TOP3A-209ENST00000580095 SPCS3P61009 180 aa9.09□□□□□ -0.95
TOP3A-209ENST00000580095 CYCSP99999 105 aaKnown RBP9.09□□□□□ -0.95
TOP3A-209ENST00000580095 AKIRIN2Q53H80 203 aa9.09□□□□□ -0.95
TOP3A-209ENST00000580095 VASH2Q86V25 355 aa9.09□□□□□ -0.95
TOP3A-209ENST00000580095 CALHM1Q8IU99 346 aa9.09□□□□□ -0.95
TOP3A-209ENST00000580095 HS3ST6Q96QI5 342 aa9.09□□□□□ -0.95
TOP3A-209ENST00000580095 NKX6-2Q9C056 277 aaPredicted RBP9.09□□□□□ -0.95
TOP3A-209ENST00000580095 METTL9Q9H1A3 318 aa9.09□□□□□ -0.95
TOP3A-209ENST00000580095 OR51B6Q9H340 312 aa9.09□□□□□ -0.95
TOP3A-209ENST00000580095 UFSP2Q9NUQ7 469 aa9.09□□□□□ -0.95
TOP3A-209ENST00000580095 ANXA10Q9UJ72 324 aa9.09□□□□□ -0.95
TOP3A-209ENST00000580095 PADI1Q9ULC6 663 aa9.09□□□□□ -0.95
TOP3A-209ENST00000580095 CBY1Q9Y3M2 126 aa9.09□□□□□ -0.95
TOP3A-209ENST00000580095 TRBV6-7A0A0A0MS04 114 aa9.09□□□□□ -0.95
TOP3A-209ENST00000580095 ZNF729A6NN14 1252 aaPredicted RBP9.09□□□□□ -0.95
TOP3A-209ENST00000580095 CEACAM18A8MTB9 384 aa9.09□□□□□ -0.95
TOP3A-209ENST00000580095 F8VVB4 439 aa9.09□□□□□ -0.95
TOP3A-209ENST00000580095 F8VWA3 439 aa9.09□□□□□ -0.95
TOP3A-209ENST00000580095 ZNF708P17019 499 aa9.09□□□□□ -0.95
TOP3A-209ENST00000580095 FKBP2P26885 142 aaKnown RBP9.09□□□□□ -0.95
TOP3A-209ENST00000580095 DUSP1P28562 367 aa9.09□□□□□ -0.95
TOP3A-209ENST00000580095 KCNJ3P48549 501 aa9.09□□□□□ -0.95
TOP3A-209ENST00000580095 RBP2P50120 134 aa9.09□□□□□ -0.95
TOP3A-209ENST00000580095 RAB35Q15286 201 aa9.09□□□□□ -0.95
TOP3A-209ENST00000580095 C3AR1Q16581 482 aa9.09□□□□□ -0.95
TOP3A-209ENST00000580095 AARDQ4LEZ3 155 aa9.09□□□□□ -0.95
TOP3A-209ENST00000580095 FAM76BQ5HYJ3 339 aa9.09□□□□□ -0.95
TOP3A-209ENST00000580095 C9orf152Q5JTZ5 239 aa9.09□□□□□ -0.95
TOP3A-209ENST00000580095 PLCXD3Q63HM9 321 aa9.09□□□□□ -0.95
TOP3A-209ENST00000580095 SLC22A25Q6T423 547 aa9.09□□□□□ -0.95
TOP3A-209ENST00000580095 Q6ZPA2 131 aa9.09□□□□□ -0.95
TOP3A-209ENST00000580095 FOXL2NBQ6ZUU3 175 aa9.09□□□□□ -0.95
TOP3A-209ENST00000580095 CPEB3Q8NE35 698 aaKnown RBP9.09□□□□□ -0.95
TOP3A-209ENST00000580095 CT55Q8WUE5 264 aa9.09□□□□□ -0.95
TOP3A-209ENST00000580095 PHYHIPLQ96FC7 376 aa9.09□□□□□ -0.95
TOP3A-209ENST00000580095 TM2D1Q9BX74 207 aa9.09□□□□□ -0.95
TOP3A-209ENST00000580095 TLNRD1Q9H1K6 362 aa9.09□□□□□ -0.95
TOP3A-209ENST00000580095 PLA2G3Q9NZ20 509 aa9.09□□□□□ -0.95
TOP3A-209ENST00000580095 ST3GAL6Q9Y274 331 aa9.09□□□□□ -0.95
TOP3A-209ENST00000580095 A0A1B0GW55 424 aa9.08□□□□□ -0.96
TOP3A-209ENST00000580095 TMEM218A2RU14 115 aa9.08□□□□□ -0.96
TOP3A-209ENST00000580095 FAM166BA8MTA8 275 aa9.08□□□□□ -0.96
TOP3A-209ENST00000580095 OR7C1O76099 320 aaPredicted RBP9.08□□□□□ -0.96
TOP3A-209ENST00000580095 FARS2O95363 451 aaKnown RBP9.08□□□□□ -0.96
TOP3A-209ENST00000580095 HLA-HP01893 362 aa9.08□□□□□ -0.96
TOP3A-209ENST00000580095 OR5AC1P0C628 307 aa9.08□□□□□ -0.96
TOP3A-209ENST00000580095 FAM157CP0CG43 387 aa9.08□□□□□ -0.96
TOP3A-209ENST00000580095 DUX4L2P0CJ85 424 aa9.08□□□□□ -0.96
TOP3A-209ENST00000580095 DUX4L3P0CJ86 424 aa9.08□□□□□ -0.96
TOP3A-209ENST00000580095 DUX4L4P0CJ87 422 aa9.08□□□□□ -0.96
TOP3A-209ENST00000580095 DUX4L5P0CJ88 424 aa9.08□□□□□ -0.96
TOP3A-209ENST00000580095 DUX4L6P0CJ89 424 aa9.08□□□□□ -0.96
TOP3A-209ENST00000580095 DUX4L7P0CJ90 424 aa9.08□□□□□ -0.96
TOP3A-209ENST00000580095 RPP30P78346 268 aaKnown RBP9.08□□□□□ -0.96
TOP3A-209ENST00000580095 GGNBP1Q5YKI7 109 aa9.08□□□□□ -0.96
TOP3A-209ENST00000580095 LYZL2Q7Z4W2 148 aa9.08□□□□□ -0.96
TOP3A-209ENST00000580095 RHBDD1Q8TEB9 315 aa9.08□□□□□ -0.96
TOP3A-209ENST00000580095 SLC5A7Q9GZV3 580 aa9.08□□□□□ -0.96
TOP3A-209ENST00000580095 PIGMQ9H3S5 423 aa9.08□□□□□ -0.96
TOP3A-209ENST00000580095 IL36RNQ9UBH0 155 aa9.08□□□□□ -0.96
TOP3A-209ENST00000580095 DUX4Q9UBX2 424 aa9.08□□□□□ -0.96
TOP3A-209ENST00000580095 DOCK10Q96BY6 2186 aa9.08□□□□□ -0.96
TOP3A-209ENST00000580095 A0A1B0GV50 99 aa9.08□□□□□ -0.96
TOP3A-209ENST00000580095 FCGR3AP08637 254 aa9.08□□□□□ -0.96
TOP3A-209ENST00000580095 SRD5A2P31213 254 aa9.08□□□□□ -0.96
TOP3A-209ENST00000580095 FCGR2CP31995 323 aa9.08□□□□□ -0.96
TOP3A-209ENST00000580095 ALDH3B1P43353 468 aa9.08□□□□□ -0.96
TOP3A-209ENST00000580095 LPAR6P43657 344 aa9.08□□□□□ -0.96
TOP3A-209ENST00000580095 BLOC1S1P78537 153 aa9.08□□□□□ -0.96
TOP3A-209ENST00000580095 FAM3AP98173 230 aa9.08□□□□□ -0.96
TOP3A-209ENST00000580095 SLC25A26Q70HW3 274 aa9.08□□□□□ -0.96
TOP3A-209ENST00000580095 DEFB123Q8N688 67 aa9.08□□□□□ -0.96
TOP3A-209ENST00000580095 SLC30A7Q8NEW0 376 aa9.08□□□□□ -0.96
TOP3A-209ENST00000580095 SCGB3A2Q96PL1 93 aa9.08□□□□□ -0.96
TOP3A-209ENST00000580095 OR2H1Q9GZK4 316 aa9.08□□□□□ -0.96
TOP3A-209ENST00000580095 PLA2G2EQ9NZK7 142 aa9.08□□□□□ -0.96
TOP3A-209ENST00000580095 GHRLQ9UBU3 117 aa9.08□□□□□ -0.96
TOP3A-209ENST00000580095 LOXL2Q9Y4K0 774 aa9.08□□□□□ -0.96
TOP3A-209ENST00000580095 MED13Q9UHV7 2174 aa9.08□□□□□ -0.96
TOP3A-209ENST00000580095 RD3LP0DJH9 198 aa9.08□□□□□ -0.96
TOP3A-209ENST00000580095 HKR1P10072 659 aa9.08□□□□□ -0.96
TOP3A-209ENST00000580095 ZXDAP98168 799 aa9.08□□□□□ -0.96
TOP3A-209ENST00000580095 MST1LQ2TV78 715 aa9.08□□□□□ -0.96
TOP3A-209ENST00000580095 EIF2S3LQ2VIR3 472 aaKnown RBP9.08□□□□□ -0.96
TOP3A-209ENST00000580095 SGPP2Q8IWX5 399 aa9.08□□□□□ -0.96
TOP3A-209ENST00000580095 OR2V1Q8NHB1 315 aa9.08□□□□□ -0.96
TOP3A-209ENST00000580095 FNDC9Q8TBE3 224 aa9.08□□□□□ -0.96
TOP3A-209ENST00000580095 ERGIC1Q969X5 290 aa9.08□□□□□ -0.96
TOP3A-209ENST00000580095 THOC3Q96J01 351 aaKnown RBP9.08□□□□□ -0.96
TOP3A-209ENST00000580095 SGCZQ96LD1 299 aa9.08□□□□□ -0.96
TOP3A-209ENST00000580095 DNTTIP1Q9H147 329 aa9.08□□□□□ -0.96
TOP3A-209ENST00000580095 CALHM2Q9HA72 323 aa9.08□□□□□ -0.96
TOP3A-209ENST00000580095 TECTAO75443 2155 aa9.07□□□□□ -0.96
TOP3A-209ENST00000580095 CCDC163A0A0D9SF12 145 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms