RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 CRYAAP02489 173 aa8.64□□□□□ -1.03
SS18-210ENST00000578700 GSTP1P09211 210 aaKnown RBP8.64□□□□□ -1.03
SS18-210ENST00000578700 FAM157BP0CG42 384 aa8.64□□□□□ -1.03
SS18-210ENST00000578700 MGMTP16455 207 aa8.64□□□□□ -1.03
SS18-210ENST00000578700 SERPINA2P20848 420 aa8.64□□□□□ -1.03
SS18-210ENST00000578700 RFX2P48378 723 aa8.64□□□□□ -1.03
SS18-210ENST00000578700 GZMKP49863 264 aa8.64□□□□□ -1.03
SS18-210ENST00000578700 GNG2P59768 71 aa8.64□□□□□ -1.03
SS18-210ENST00000578700 MRPS15P82914 257 aaKnown RBP8.64□□□□□ -1.03
SS18-210ENST00000578700 QRFPP83859 136 aa8.64□□□□□ -1.03
SS18-210ENST00000578700 PLA2G7Q13093 441 aa8.64□□□□□ -1.03
SS18-210ENST00000578700 UNC119Q13432 240 aa8.64□□□□□ -1.03
SS18-210ENST00000578700 PCGF3Q3KNV8 242 aa8.64□□□□□ -1.03
SS18-210ENST00000578700 C3orf36Q3SXR2 165 aa8.64□□□□□ -1.03
SS18-210ENST00000578700 SEZ6L2Q6UXD5 910 aa8.64□□□□□ -1.03
SS18-210ENST00000578700 Q6ZTK2 550 aa8.64□□□□□ -1.03
SS18-210ENST00000578700 RFPL4BQ6ZWI9 263 aa8.64□□□□□ -1.03
SS18-210ENST00000578700 ZNF573Q86YE8 665 aa8.64□□□□□ -1.03
SS18-210ENST00000578700 MKXQ8IYA7 352 aa8.64□□□□□ -1.03
SS18-210ENST00000578700 WDR31Q8NA23 367 aa8.64□□□□□ -1.03
SS18-210ENST00000578700 ZSCAN4Q8NAM6 433 aaPredicted RBP8.64□□□□□ -1.03
SS18-210ENST00000578700 DUSP18Q8NEJ0 188 aa8.64□□□□□ -1.03
SS18-210ENST00000578700 OR5A2Q8NGI9 324 aa8.64□□□□□ -1.03
SS18-210ENST00000578700 OR8S1Q8NH09 359 aa8.64□□□□□ -1.03
SS18-210ENST00000578700 UBASH3BQ8TF42 649 aa8.64□□□□□ -1.03
SS18-210ENST00000578700 CREB3L1Q96BA8 519 aa8.64□□□□□ -1.03
SS18-210ENST00000578700 CMBLQ96DG6 245 aa8.64□□□□□ -1.03
SS18-210ENST00000578700 ZNF75AQ96N20 296 aa8.64□□□□□ -1.03
SS18-210ENST00000578700 DHRS9Q9BPW9 319 aa8.64□□□□□ -1.03
SS18-210ENST00000578700 MICU1Q9BPX6 476 aa8.64□□□□□ -1.03
SS18-210ENST00000578700 RTL8AQ9BWD3 113 aa8.64□□□□□ -1.03
SS18-210ENST00000578700 SELENOIQ9C0D9 397 aa8.64□□□□□ -1.03
SS18-210ENST00000578700 IFT46Q9NQC8 304 aa8.64□□□□□ -1.03
SS18-210ENST00000578700 MCUBQ9NWR8 336 aa8.64□□□□□ -1.03
SS18-210ENST00000578700 MRPL15Q9P015 296 aaKnown RBP8.64□□□□□ -1.03
SS18-210ENST00000578700 NLKQ9UBE8 527 aa8.64□□□□□ -1.03
SS18-210ENST00000578700 MTFP1Q9UDX5 166 aa8.64□□□□□ -1.03
SS18-210ENST00000578700 ZNF107Q9UII5 783 aaPredicted RBP8.64□□□□□ -1.03
SS18-210ENST00000578700 RBMX2Q9Y388 322 aaKnown RBP8.64□□□□□ -1.03
SS18-210ENST00000578700 NUBP2Q9Y5Y2 271 aa8.64□□□□□ -1.03
SS18-210ENST00000578700 ANKRD20A5PA0PJZ0 165 aa8.63□□□□□ -1.03
SS18-210ENST00000578700 PLATP00750 562 aa8.63□□□□□ -1.03
SS18-210ENST00000578700 CELA3BP08861 270 aa8.63□□□□□ -1.03
SS18-210ENST00000578700 AKAIN1P0CW23 69 aa8.63□□□□□ -1.03
SS18-210ENST00000578700 SPNP16150 400 aa8.63□□□□□ -1.03
SS18-210ENST00000578700 HNF1AP20823 631 aa8.63□□□□□ -1.03
SS18-210ENST00000578700 SLC6A1P30531 599 aa8.63□□□□□ -1.03
SS18-210ENST00000578700 CBX5P45973 191 aa8.63□□□□□ -1.03
SS18-210ENST00000578700 SRP9P49458 86 aaKnown RBP8.63□□□□□ -1.03
SS18-210ENST00000578700 PRSS12P56730 875 aa8.63□□□□□ -1.03
SS18-210ENST00000578700 TAS2R19P59542 299 aa8.63□□□□□ -1.03
SS18-210ENST00000578700 MZT1Q08AG7 82 aa8.63□□□□□ -1.03
SS18-210ENST00000578700 PDZK1IP1Q13113 114 aa8.63□□□□□ -1.03
SS18-210ENST00000578700 KLF9Q13886 244 aaPredicted RBP8.63□□□□□ -1.03
SS18-210ENST00000578700 PNLIPRP3Q17RR3 467 aa8.63□□□□□ -1.03
SS18-210ENST00000578700 ZNF718Q3SXZ3 478 aa8.63□□□□□ -1.03
SS18-210ENST00000578700 SPATA46Q5T0L3 261 aa8.63□□□□□ -1.03
SS18-210ENST00000578700 C11orf71Q6IPW1 123 aa8.63□□□□□ -1.03
SS18-210ENST00000578700 TMEM108Q6UXF1 575 aa8.63□□□□□ -1.03
SS18-210ENST00000578700 C12orf54Q6X4T0 127 aa8.63□□□□□ -1.03
SS18-210ENST00000578700 SAXO1Q8IYX7 474 aa8.63□□□□□ -1.03
SS18-210ENST00000578700 PAQR4Q8N4S7 273 aaPredicted RBP8.63□□□□□ -1.03
SS18-210ENST00000578700 BHLHE23Q8NDY6 225 aa8.63□□□□□ -1.03
SS18-210ENST00000578700 PXT1Q8NFP0 134 aa8.63□□□□□ -1.03
SS18-210ENST00000578700 OR51F2Q8NH61 342 aa8.63□□□□□ -1.03
SS18-210ENST00000578700 C10orf105Q8TEF2 133 aa8.63□□□□□ -1.03
SS18-210ENST00000578700 C1orf159Q96HA4 380 aa8.63□□□□□ -1.03
SS18-210ENST00000578700 RADILQ96JH8 1075 aa8.63□□□□□ -1.03
SS18-210ENST00000578700 RNF170Q96K19 258 aa8.63□□□□□ -1.03
SS18-210ENST00000578700 NEDD4LQ96PU5 975 aa8.63□□□□□ -1.03
SS18-210ENST00000578700 LPAR5Q9H1C0 372 aa8.63□□□□□ -1.03
SS18-210ENST00000578700 BANF2Q9H503 90 aa8.63□□□□□ -1.03
SS18-210ENST00000578700 IL36GQ9NZH8 169 aa8.63□□□□□ -1.03
SS18-210ENST00000578700 KLK11Q9UBX7 282 aa8.63□□□□□ -1.03
SS18-210ENST00000578700 GPR160Q9UJ42 338 aa8.63□□□□□ -1.03
SS18-210ENST00000578700 SLC25A15Q9Y619 301 aa8.63□□□□□ -1.03
SS18-210ENST00000578700 ARFGEF3Q5TH69 2177 aa8.62□□□□□ -1.03
SS18-210ENST00000578700 PQLC2LA1A4F0 135 aa8.62□□□□□ -1.03
SS18-210ENST00000578700 SERPINE3A8MV23 424 aa8.62□□□□□ -1.03
SS18-210ENST00000578700 ZNF736B4DX44 427 aaPredicted RBP8.62□□□□□ -1.03
SS18-210ENST00000578700 TRAPPC2LH3BP13 241 aa8.62□□□□□ -1.03
SS18-210ENST00000578700 RAB27BO00194 218 aa8.62□□□□□ -1.03
SS18-210ENST00000578700 TGFAP01135 160 aa8.62□□□□□ -1.03
SS18-210ENST00000578700 IGLV1-44P01699 117 aa8.62□□□□□ -1.03
SS18-210ENST00000578700 MT-ND4P03905 459 aa8.62□□□□□ -1.03
SS18-210ENST00000578700 CECR9P0C854 216 aa8.62□□□□□ -1.03
SS18-210ENST00000578700 HIST1H1DP16402 221 aaKnown RBP8.62□□□□□ -1.03
SS18-210ENST00000578700 GPM6AP51674 278 aa8.62□□□□□ -1.03
SS18-210ENST00000578700 EFNA4P52798 201 aa8.62□□□□□ -1.03
SS18-210ENST00000578700 SELENOVP59797 346 aa8.62□□□□□ -1.03
SS18-210ENST00000578700 RPS23P62266 143 aaKnown RBP8.62□□□□□ -1.03
SS18-210ENST00000578700 GNG3P63215 75 aa8.62□□□□□ -1.03
SS18-210ENST00000578700 ARFRP1Q13795 201 aa8.62□□□□□ -1.03
SS18-210ENST00000578700 DMRTC1Q5HYR2 192 aa8.62□□□□□ -1.03
SS18-210ENST00000578700 OR2T2Q6IF00 324 aa8.62□□□□□ -1.03
SS18-210ENST00000578700 ASCL4Q6XD76 172 aa8.62□□□□□ -1.03
SS18-210ENST00000578700 TRAPPC6BQ86SZ2 158 aa8.62□□□□□ -1.03
SS18-210ENST00000578700 ZNF554Q86TJ5 538 aa8.62□□□□□ -1.03
SS18-210ENST00000578700 OSR2Q8N2R0 312 aa8.62□□□□□ -1.03
SS18-210ENST00000578700 TMEM104Q8NE00 496 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms