RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 POC1AQ8NBT0 407 aa6.74□□□□□ -1.33
COPS3-215ENST00000578317 OR51T1Q8NGJ9 327 aa6.74□□□□□ -1.33
COPS3-215ENST00000578317 OR5D18Q8NGL1 313 aa6.74□□□□□ -1.33
COPS3-215ENST00000578317 ITLN1Q8WWA0 313 aa6.74□□□□□ -1.33
COPS3-215ENST00000578317 RAB40AQ8WXH6 277 aa6.74□□□□□ -1.33
COPS3-215ENST00000578317 CEP19Q96LK0 163 aa6.74□□□□□ -1.33
COPS3-215ENST00000578317 WDFY2Q96P53 400 aa6.74□□□□□ -1.33
COPS3-215ENST00000578317 NRIP2Q9BQI9 281 aa6.74□□□□□ -1.33
COPS3-215ENST00000578317 SAP30LQ9HAJ7 183 aa6.74□□□□□ -1.33
COPS3-215ENST00000578317 HES4Q9HCC6 221 aa6.74□□□□□ -1.33
COPS3-215ENST00000578317 DLL4Q9NR61 685 aa6.74□□□□□ -1.33
COPS3-215ENST00000578317 ZNF701Q9NV72 531 aaPredicted RBP6.74□□□□□ -1.33
COPS3-215ENST00000578317 COMMD3Q9UBI1 195 aa6.74□□□□□ -1.33
COPS3-215ENST00000578317 ING4Q9UNL4 249 aa6.74□□□□□ -1.33
COPS3-215ENST00000578317 PPP1R3CQ9UQK1 317 aa6.74□□□□□ -1.33
COPS3-215ENST00000578317 PEX16Q9Y5Y5 336 aa6.74□□□□□ -1.33
COPS3-215ENST00000578317 CSMD2Q7Z408 3487 aa6.74□□□□□ -1.33
COPS3-215ENST00000578317 A0A0A6YYH2 397 aa6.73□□□□□ -1.33
COPS3-215ENST00000578317 TMEM272A0A1B0GTI8 110 aa6.73□□□□□ -1.33
COPS3-215ENST00000578317 A6NJ64 397 aa6.73□□□□□ -1.33
COPS3-215ENST00000578317 A6NLC8 198 aa6.73□□□□□ -1.33
COPS3-215ENST00000578317 SRRM5B3KS81 715 aa6.73□□□□□ -1.33
COPS3-215ENST00000578317 TRAPPC2LH3BP13 241 aa6.73□□□□□ -1.33
COPS3-215ENST00000578317 H3BUI4 141 aa6.73□□□□□ -1.33
COPS3-215ENST00000578317 SPRY1O43609 319 aaPredicted RBP6.73□□□□□ -1.33
COPS3-215ENST00000578317 ANGPTL7O43827 346 aa6.73□□□□□ -1.33
COPS3-215ENST00000578317 RHBDL1O75783 438 aa6.73□□□□□ -1.33
COPS3-215ENST00000578317 SCGNO76038 276 aa6.73□□□□□ -1.33
COPS3-215ENST00000578317 CSTBP04080 98 aaKnown RBP6.73□□□□□ -1.33
COPS3-215ENST00000578317 CHRM2P08172 466 aa6.73□□□□□ -1.33
COPS3-215ENST00000578317 NPBWR2P48146 333 aa6.73□□□□□ -1.33
COPS3-215ENST00000578317 ART1P52961 327 aa6.73□□□□□ -1.33
COPS3-215ENST00000578317 FGF12P61328 243 aa6.73□□□□□ -1.33
COPS3-215ENST00000578317 UNC119Q13432 240 aa6.73□□□□□ -1.33
COPS3-215ENST00000578317 P2RY14Q15391 338 aa6.73□□□□□ -1.33
COPS3-215ENST00000578317 RSU1Q15404 277 aa6.73□□□□□ -1.33
COPS3-215ENST00000578317 CR1LQ2VPA4 569 aa6.73□□□□□ -1.33
COPS3-215ENST00000578317 SLC22A6Q4U2R8 563 aa6.73□□□□□ -1.33
COPS3-215ENST00000578317 SPRNQ5BIV9 151 aa6.73□□□□□ -1.33
COPS3-215ENST00000578317 PRAMEF6Q5VXH4 476 aa6.73□□□□□ -1.33
COPS3-215ENST00000578317 HIST2H2BCQ6DN03 193 aa6.73□□□□□ -1.33
COPS3-215ENST00000578317 TMEM104Q8NE00 496 aa6.73□□□□□ -1.33
COPS3-215ENST00000578317 OR6Q1Q8NGQ2 317 aa6.73□□□□□ -1.33
COPS3-215ENST00000578317 NKX3-1Q99801 234 aaPredicted RBP6.73□□□□□ -1.33
COPS3-215ENST00000578317 VRK1Q99986 396 aaPredicted RBP6.73□□□□□ -1.33
COPS3-215ENST00000578317 URM1Q9BTM9 101 aaKnown RBP6.73□□□□□ -1.33
COPS3-215ENST00000578317 TM2D1Q9BX74 207 aa6.73□□□□□ -1.33
COPS3-215ENST00000578317 CACNG6Q9BXT2 260 aa6.73□□□□□ -1.33
COPS3-215ENST00000578317 CXorf56Q9H5V9 222 aa6.73□□□□□ -1.33
COPS3-215ENST00000578317 HMG20AQ9NP66 347 aa6.73□□□□□ -1.33
COPS3-215ENST00000578317 C1orf123Q9NWV4 160 aa6.73□□□□□ -1.33
COPS3-215ENST00000578317 RNF7Q9UBF6 113 aa6.73□□□□□ -1.33
COPS3-215ENST00000578317 NPTNQ9Y639 398 aa6.73□□□□□ -1.33
COPS3-215ENST00000578317 SPG11Q96JI7 2443 aa6.73□□□□□ -1.33
COPS3-215ENST00000578317 UNC79Q9P2D8 2635 aa6.73□□□□□ -1.33
COPS3-215ENST00000578317 A0A0B4J203 849 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 IGHV1-69-2A0A0G2JMI3 117 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 METTL21EPA6NDL7 271 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 FAM90A10PA6NDY2 464 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 FAM90A18PA6NE21 464 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 FAM90A16PA6NEW6 464 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 FAM90A20PA6NIJ5 464 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 FAM90A8PA6NJQ4 464 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 FAM90A7PA6NKC0 464 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 LRRC30A6NM36 301 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 FAM90A22PA8MWA6 464 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 FAM90A12PA8MX19 464 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 FAM90A5PA8MXJ8 464 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 FAM90A23PA8MXZ1 464 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 CDC14BO60729 498 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 FAM90A15PP0C7V4 464 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 FAM90A13PP0C7W8 464 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 FAM90A14PP0C7W9 464 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 FAM90A24PP0C7X0 464 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 IRF2P14316 349 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 MGMTP16455 207 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 ETV6P41212 452 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 EFNA4P52798 201 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 TMEM33P57088 247 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 RPS27AP62979 156 aaKnown RBP6.72□□□□□ -1.33
COPS3-215ENST00000578317 ZNF146Q15072 292 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 OR10K2Q6IF99 312 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 RAB12Q6IQ22 244 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 ZNF826PQ6ZT77 177 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 LINC00596Q86U02 117 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 MOGAT3Q86VF5 341 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 LRRC28Q86X40 367 aaPredicted RBP6.72□□□□□ -1.33
COPS3-215ENST00000578317 C1orf87Q8N0U7 546 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 FAM58AQ8N1B3 248 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 OSR2Q8N2R0 312 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 GCSAMQ8N6F7 178 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 OR5H6Q8NGV6 325 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 OR11L1Q8NGX0 322 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 LGALS14Q8TCE9 139 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 RDH5Q92781 318 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 SLAMF9Q96A28 289 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 S100A16Q96FQ6 103 aaKnown RBP6.72□□□□□ -1.33
COPS3-215ENST00000578317 SOSTQ9BQB4 213 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 NUDT16L1Q9BRJ7 211 aaKnown RBP6.72□□□□□ -1.33
COPS3-215ENST00000578317 C6orf62Q9GZU0 229 aaPredicted RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms