RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 TMEM204Q9BSN7 226 aa9.52□□□□□ -0.89
SEC22B-201ENST00000578049 A0A1W2PN81 502 aa9.52□□□□□ -0.89
SEC22B-201ENST00000578049 SRFP11831 508 aa9.52□□□□□ -0.89
SEC22B-201ENST00000578049 CHRNA7P36544 502 aa9.52□□□□□ -0.89
SEC22B-201ENST00000578049 STUMQ69YW2 141 aa9.52□□□□□ -0.89
SEC22B-201ENST00000578049 PRR27Q6MZM9 219 aa9.52□□□□□ -0.89
SEC22B-201ENST00000578049 LINC00596Q86U02 117 aa9.52□□□□□ -0.89
SEC22B-201ENST00000578049 HOGA1Q86XE5 327 aa9.52□□□□□ -0.89
SEC22B-201ENST00000578049 ZNF547Q8IVP9 402 aa9.52□□□□□ -0.89
SEC22B-201ENST00000578049 CA10Q9NS85 328 aa9.52□□□□□ -0.89
SEC22B-201ENST00000578049 TECRQ9NZ01 308 aaKnown RBP9.52□□□□□ -0.89
SEC22B-201ENST00000578049 LIPGQ9Y5X9 500 aa9.52□□□□□ -0.89
SEC22B-201ENST00000578049 ZNF816Q0VGE8 651 aaPredicted RBP9.52□□□□□ -0.89
SEC22B-201ENST00000578049 IL11RAQ14626 422 aa9.52□□□□□ -0.89
SEC22B-201ENST00000578049 RGS7BPQ6MZT1 257 aaPredicted RBP9.52□□□□□ -0.89
SEC22B-201ENST00000578049 CADM4Q8NFZ8 388 aa9.52□□□□□ -0.89
SEC22B-201ENST00000578049 ST6GALNAC2Q9UJ37 374 aa9.52□□□□□ -0.89
SEC22B-201ENST00000578049 TTC3P53804 2025 aa9.52□□□□□ -0.89
SEC22B-201ENST00000578049 CTXND1A0A1B0GTU2 59 aa9.52□□□□□ -0.89
SEC22B-201ENST00000578049 KIAA1324LA8MWY0 1029 aaPredicted RBP9.52□□□□□ -0.89
SEC22B-201ENST00000578049 PIAS2O75928 621 aa9.52□□□□□ -0.89
SEC22B-201ENST00000578049 EDN3P14138 238 aa9.52□□□□□ -0.89
SEC22B-201ENST00000578049 SRD5A2P31213 254 aa9.52□□□□□ -0.89
SEC22B-201ENST00000578049 CCR2P41597 374 aa9.52□□□□□ -0.89
SEC22B-201ENST00000578049 OR3A4PP47883 348 aa9.52□□□□□ -0.89
SEC22B-201ENST00000578049 PRDX4Q13162 271 aa9.52□□□□□ -0.89
SEC22B-201ENST00000578049 TMEM240Q5SV17 173 aa9.52□□□□□ -0.89
SEC22B-201ENST00000578049 OR13G1Q8NGZ3 307 aa9.52□□□□□ -0.89
SEC22B-201ENST00000578049 ASB10Q8WXI3 467 aa9.52□□□□□ -0.89
SEC22B-201ENST00000578049 VN1R1Q9GZP7 353 aa9.52□□□□□ -0.89
SEC22B-201ENST00000578049 MYH14Q7Z406 1995 aaKnown RBP9.51□□□□□ -0.89
SEC22B-201ENST00000578049 ITGB4P16144 1822 aa9.51□□□□□ -0.89
SEC22B-201ENST00000578049 ANKRD34CP0C6C1 535 aa9.51□□□□□ -0.89
SEC22B-201ENST00000578049 BMP5P22003 454 aa9.51□□□□□ -0.89
SEC22B-201ENST00000578049 CDAP32320 146 aa9.51□□□□□ -0.89
SEC22B-201ENST00000578049 OR5I1Q13606 314 aa9.51□□□□□ -0.89
SEC22B-201ENST00000578049 TCTN1Q2MV58 587 aa9.51□□□□□ -0.89
SEC22B-201ENST00000578049 FAM78BQ5VT40 261 aa9.51□□□□□ -0.89
SEC22B-201ENST00000578049 STXBP6Q8NFX7 210 aa9.51□□□□□ -0.89
SEC22B-201ENST00000578049 OR4F17Q8NGA8 305 aa9.51□□□□□ -0.89
SEC22B-201ENST00000578049 TRDCB7Z8K6 153 aa9.51□□□□□ -0.89
SEC22B-201ENST00000578049 TNFSF14O43557 240 aa9.51□□□□□ -0.89
SEC22B-201ENST00000578049 MT-ND6P03923 174 aa9.51□□□□□ -0.89
SEC22B-201ENST00000578049 F2RP25116 425 aa9.51□□□□□ -0.89
SEC22B-201ENST00000578049 PAFAH1B2P68402 229 aa9.51□□□□□ -0.89
SEC22B-201ENST00000578049 CEBPEQ15744 281 aa9.51□□□□□ -0.89
SEC22B-201ENST00000578049 TMEM215Q68D42 235 aa9.51□□□□□ -0.89
SEC22B-201ENST00000578049 ZNF343Q6P1L6 599 aa9.51□□□□□ -0.89
SEC22B-201ENST00000578049 SLC36A1Q7Z2H8 476 aa9.51□□□□□ -0.89
SEC22B-201ENST00000578049 AMER3Q8N944 861 aa9.51□□□□□ -0.89
SEC22B-201ENST00000578049 FLRT3Q9NZU0 649 aa9.51□□□□□ -0.89
SEC22B-201ENST00000578049 A0A096LPE4 126 aa9.51□□□□□ -0.89
SEC22B-201ENST00000578049 SERTM2A0A1B0GWG4 89 aa9.51□□□□□ -0.89
SEC22B-201ENST00000578049 A0A1W2PPZ6 126 aa9.51□□□□□ -0.89
SEC22B-201ENST00000578049 CXorf65A6NEN9 183 aa9.51□□□□□ -0.89
SEC22B-201ENST00000578049 H3BQ15 152 aa9.51□□□□□ -0.89
SEC22B-201ENST00000578049 PRRG2O14669 202 aa9.51□□□□□ -0.89
SEC22B-201ENST00000578049 TNFSF11O14788 317 aa9.51□□□□□ -0.89
SEC22B-201ENST00000578049 CD160O95971 181 aa9.51□□□□□ -0.89
SEC22B-201ENST00000578049 HOXA6P31267 233 aa9.51□□□□□ -0.89
SEC22B-201ENST00000578049 MESTQ5EB52 335 aa9.51□□□□□ -0.89
SEC22B-201ENST00000578049 LRP11Q86VZ4 500 aa9.51□□□□□ -0.89
SEC22B-201ENST00000578049 OR5D13Q8NGL4 314 aa9.51□□□□□ -0.89
SEC22B-201ENST00000578049 ASB5Q8WWX0 329 aa9.51□□□□□ -0.89
SEC22B-201ENST00000578049 TMEM230Q96A57 120 aa9.51□□□□□ -0.89
SEC22B-201ENST00000578049 C8orf44Q96CB5 159 aa9.51□□□□□ -0.89
SEC22B-201ENST00000578049 MOGAT1Q96PD6 335 aa9.51□□□□□ -0.89
SEC22B-201ENST00000578049 LRRC61Q9BV99 259 aa9.51□□□□□ -0.89
SEC22B-201ENST00000578049 DSPPQ9NZW4 1301 aa9.51□□□□□ -0.89
SEC22B-201ENST00000578049 DLK1P80370 383 aa9.51□□□□□ -0.89
SEC22B-201ENST00000578049 FAM181AQ8N9Y4 354 aa9.51□□□□□ -0.89
SEC22B-201ENST00000578049 RAB33BQ9H082 229 aa9.51□□□□□ -0.89
SEC22B-201ENST00000578049 ANKRD10Q9NXR5 420 aa9.51□□□□□ -0.89
SEC22B-201ENST00000578049 LANCL1O43813 399 aa9.51□□□□□ -0.89
SEC22B-201ENST00000578049 HNF1AP20823 631 aa9.51□□□□□ -0.89
SEC22B-201ENST00000578049 CEACAM6P40199 344 aa9.51□□□□□ -0.89
SEC22B-201ENST00000578049 POLR2GP62487 172 aaKnown RBP eCLIP9.51□□□□□ -0.89
SEC22B-201ENST00000578049 ZNF766Q5HY98 468 aa9.51□□□□□ -0.89
SEC22B-201ENST00000578049 OR5AU1Q8NGC0 362 aa9.51□□□□□ -0.89
SEC22B-201ENST00000578049 OR4S2Q8NH73 311 aa9.51□□□□□ -0.89
SEC22B-201ENST00000578049 PRO1933Q9H354 126 aa9.51□□□□□ -0.89
SEC22B-201ENST00000578049 PPYP01298 95 aa9.5□□□□□ -0.89
SEC22B-201ENST00000578049 ZNF32P17041 273 aa9.5□□□□□ -0.89
SEC22B-201ENST00000578049 RNASEKQ6P5S7 137 aaKnown RBP9.5□□□□□ -0.89
SEC22B-201ENST00000578049 OR4D11Q8NGI4 311 aa9.5□□□□□ -0.89
SEC22B-201ENST00000578049 ZNF253O75346 499 aa9.5□□□□□ -0.89
SEC22B-201ENST00000578049 RAC3P60763 192 aa9.5□□□□□ -0.89
SEC22B-201ENST00000578049 EWSR1Q01844 656 aaKnown RBP eCLIP9.5□□□□□ -0.89
SEC22B-201ENST00000578049 SLC35E3Q7Z769 313 aa9.5□□□□□ -0.89
SEC22B-201ENST00000578049 PTP4A3O75365 173 aa9.5□□□□□ -0.89
SEC22B-201ENST00000578049 PPP1CAP62136 330 aa9.5□□□□□ -0.89
SEC22B-201ENST00000578049 PSG6Q00889 435 aa9.5□□□□□ -0.89
SEC22B-201ENST00000578049 TMEM267Q0VDI3 215 aaPredicted RBP9.5□□□□□ -0.89
SEC22B-201ENST00000578049 ANKRD55Q3KP44 614 aa9.5□□□□□ -0.89
SEC22B-201ENST00000578049 GVQW1Q8N7I0 195 aa9.5□□□□□ -0.89
SEC22B-201ENST00000578049 OR6C3Q9NZP0 311 aa9.5□□□□□ -0.89
SEC22B-201ENST00000578049 MPTX1A8MV57 137 aa9.5□□□□□ -0.89
SEC22B-201ENST00000578049 K7ERU9 68 aa9.5□□□□□ -0.89
SEC22B-201ENST00000578049 ARG1P05089 322 aa9.5□□□□□ -0.89
SEC22B-201ENST00000578049 TMEM97Q5BJF2 176 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms