RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 SSTR5P35346 364 aa3.35□□□□□ -1.87
NUP88-213ENST00000576862 MAGEA5P43359 124 aa3.35□□□□□ -1.87
NUP88-213ENST00000576862 CSNK1A1P48729 337 aa3.35□□□□□ -1.87
NUP88-213ENST00000576862 AP1S2P56377 157 aa3.35□□□□□ -1.87
NUP88-213ENST00000576862 OR2B8PP59922 312 aa3.35□□□□□ -1.87
NUP88-213ENST00000576862 UBE2KP61086 200 aa3.35□□□□□ -1.87
NUP88-213ENST00000576862 GNGT1P63211 74 aa3.35□□□□□ -1.87
NUP88-213ENST00000576862 NTHL1P78549 312 aa3.35□□□□□ -1.87
NUP88-213ENST00000576862 TLE4Q04727 773 aa3.35□□□□□ -1.87
NUP88-213ENST00000576862 RGS1Q08116 209 aa3.35□□□□□ -1.87
NUP88-213ENST00000576862 C2orf80Q0P641 193 aa3.35□□□□□ -1.87
NUP88-213ENST00000576862 KRR1Q13601 381 aaKnown RBP3.35□□□□□ -1.87
NUP88-213ENST00000576862 POU6F1Q14863 301 aa3.35□□□□□ -1.87
NUP88-213ENST00000576862 ARL6IP1Q15041 203 aa3.35□□□□□ -1.87
NUP88-213ENST00000576862 TOMM34Q15785 309 aaPredicted RBP3.35□□□□□ -1.87
NUP88-213ENST00000576862 ATP6V1FQ16864 119 aa3.35□□□□□ -1.87
NUP88-213ENST00000576862 ZNF630Q2M218 657 aaPredicted RBP3.35□□□□□ -1.87
NUP88-213ENST00000576862 RFX4Q33E94 735 aa3.35□□□□□ -1.87
NUP88-213ENST00000576862 CCNJQ5T5M9 372 aa3.35□□□□□ -1.87
NUP88-213ENST00000576862 C1orf146Q5VVC0 180 aa3.35□□□□□ -1.87
NUP88-213ENST00000576862 FAM45BPQ6NSW5 357 aa3.35□□□□□ -1.87
NUP88-213ENST00000576862 RWDD4Q6NW29 188 aaKnown RBP3.35□□□□□ -1.87
NUP88-213ENST00000576862 Q6P435 159 aa3.35□□□□□ -1.87
NUP88-213ENST00000576862 LRRC31Q6UY01 552 aa3.35□□□□□ -1.87
NUP88-213ENST00000576862 C19orf35Q6ZS72 473 aa3.35□□□□□ -1.87
NUP88-213ENST00000576862 SLC25A48Q6ZT89 311 aaKnown RBP3.35□□□□□ -1.87
NUP88-213ENST00000576862 C3orf62Q6ZUJ4 267 aa3.35□□□□□ -1.87
NUP88-213ENST00000576862 TMEM150AQ86TG1 271 aa3.35□□□□□ -1.87
NUP88-213ENST00000576862 HORMAD1Q86X24 394 aa3.35□□□□□ -1.87
NUP88-213ENST00000576862 TRAPPC5Q8IUR0 188 aa3.35□□□□□ -1.87
NUP88-213ENST00000576862 PRSS58Q8IYP2 241 aa3.35□□□□□ -1.87
NUP88-213ENST00000576862 OR5L1Q8NGL2 311 aa3.35□□□□□ -1.87
NUP88-213ENST00000576862 PYROXD1Q8WU10 500 aa3.35□□□□□ -1.87
NUP88-213ENST00000576862 MAFIPQ8WZ33 124 aa3.35□□□□□ -1.87
NUP88-213ENST00000576862 UBE2E3Q969T4 207 aa3.35□□□□□ -1.87
NUP88-213ENST00000576862 TCEAL4Q96EI5 215 aa3.35□□□□□ -1.87
NUP88-213ENST00000576862 ZNF75AQ96N20 296 aa3.35□□□□□ -1.87
NUP88-213ENST00000576862 KCNA7Q96RP8 456 aa3.35□□□□□ -1.87
NUP88-213ENST00000576862 HBEGFQ99075 208 aa3.35□□□□□ -1.87
NUP88-213ENST00000576862 MCHR1Q99705 422 aa3.35□□□□□ -1.87
NUP88-213ENST00000576862 ZYG11BQ9C0D3 744 aa3.35□□□□□ -1.87
NUP88-213ENST00000576862 ACTR3CQ9C0K3 210 aaPredicted RBP3.35□□□□□ -1.87
NUP88-213ENST00000576862 OR51M1Q9H341 326 aa3.35□□□□□ -1.87
NUP88-213ENST00000576862 MFSD1Q9H3U5 465 aa3.35□□□□□ -1.87
NUP88-213ENST00000576862 UGT1A7Q9HAW7 530 aa3.35□□□□□ -1.87
NUP88-213ENST00000576862 INIPQ9NRY2 104 aa3.35□□□□□ -1.87
NUP88-213ENST00000576862 BFARQ9NZS9 450 aa3.35□□□□□ -1.87
NUP88-213ENST00000576862 SLC17A4Q9Y2C5 497 aa3.35□□□□□ -1.87
NUP88-213ENST00000576862 YARS2Q9Y2Z4 477 aaKnown RBP3.35□□□□□ -1.87
NUP88-213ENST00000576862 OR51B4Q9Y5P0 310 aa3.35□□□□□ -1.87
NUP88-213ENST00000576862 MTCH2Q9Y6C9 303 aa3.35□□□□□ -1.87
NUP88-213ENST00000576862 COL4A4P53420 1690 aaPredicted RBP3.35□□□□□ -1.87
NUP88-213ENST00000576862 COL4A6Q14031 1691 aa3.35□□□□□ -1.87
NUP88-213ENST00000576862 RALGAPA2Q2PPJ7 1873 aa3.35□□□□□ -1.87
NUP88-213ENST00000576862 SCN1AP35498 2009 aa3.34□□□□□ -1.87
NUP88-213ENST00000576862 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.34□□□□□ -1.87
NUP88-213ENST00000576862 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.34□□□□□ -1.87
NUP88-213ENST00000576862 TRIM49D1C9J1S8 452 aa3.34□□□□□ -1.87
NUP88-213ENST00000576862 FTCDNL1E5RQL4 147 aa3.34□□□□□ -1.87
NUP88-213ENST00000576862 G3V4G9 280 aa3.34□□□□□ -1.87
NUP88-213ENST00000576862 hCG_2039718K7EN88 272 aa3.34□□□□□ -1.87
NUP88-213ENST00000576862 KRT75O95678 551 aa3.34□□□□□ -1.87
NUP88-213ENST00000576862 AP2A1O95782 977 aa3.34□□□□□ -1.87
NUP88-213ENST00000576862 CRYZL1O95825 349 aa3.34□□□□□ -1.87
NUP88-213ENST00000576862 APOC1P02654 83 aa3.34□□□□□ -1.87
NUP88-213ENST00000576862 HLA-DQB2P05538 268 aa3.34□□□□□ -1.87
NUP88-213ENST00000576862 RNH1P13489 461 aaKnown RBP3.34□□□□□ -1.87
NUP88-213ENST00000576862 GTF2F2P13984 249 aa3.34□□□□□ -1.87
NUP88-213ENST00000576862 GFAPP14136 432 aa3.34□□□□□ -1.87
NUP88-213ENST00000576862 ZNF32P17041 273 aa3.34□□□□□ -1.87
NUP88-213ENST00000576862 CELP19835 753 aa3.34□□□□□ -1.87
NUP88-213ENST00000576862 LOXP28300 417 aaPredicted RBP3.34□□□□□ -1.87
NUP88-213ENST00000576862 VHLP40337 213 aa3.34□□□□□ -1.87
NUP88-213ENST00000576862 OPRD1P41143 372 aa3.34□□□□□ -1.87
NUP88-213ENST00000576862 BDKRB1P46663 353 aa3.34□□□□□ -1.87
NUP88-213ENST00000576862 TMED10P49755 219 aaKnown RBP3.34□□□□□ -1.87
NUP88-213ENST00000576862 DAP3P51398 398 aaKnown RBP3.34□□□□□ -1.87
NUP88-213ENST00000576862 TAS2R60P59551 318 aa3.34□□□□□ -1.87
NUP88-213ENST00000576862 CRADDP78560 199 aa3.34□□□□□ -1.87
NUP88-213ENST00000576862 FAM3AP98173 230 aa3.34□□□□□ -1.87
NUP88-213ENST00000576862 TWF1Q12792 350 aa3.34□□□□□ -1.87
NUP88-213ENST00000576862 IHHQ14623 411 aa3.34□□□□□ -1.87
NUP88-213ENST00000576862 DGUOKQ16854 277 aa3.34□□□□□ -1.87
NUP88-213ENST00000576862 TRIM16LQ309B1 348 aa3.34□□□□□ -1.87
NUP88-213ENST00000576862 TIGITQ495A1 244 aa3.34□□□□□ -1.87
NUP88-213ENST00000576862 ACSM3Q53FZ2 586 aa3.34□□□□□ -1.87
NUP88-213ENST00000576862 TRIQKQ629K1 86 aa3.34□□□□□ -1.87
NUP88-213ENST00000576862 STEAP4Q687X5 459 aa3.34□□□□□ -1.87
NUP88-213ENST00000576862 NIPAL1Q6NVV3 410 aa3.34□□□□□ -1.87
NUP88-213ENST00000576862 C4orf22Q6V702 233 aa3.34□□□□□ -1.87
NUP88-213ENST00000576862 IDO2Q6ZQW0 420 aa3.34□□□□□ -1.87
NUP88-213ENST00000576862 DNM1P46Q6ZS02 220 aa3.34□□□□□ -1.87
NUP88-213ENST00000576862 CROCCP2Q86T23 111 aa3.34□□□□□ -1.87
NUP88-213ENST00000576862 MRPL52Q86TS9 123 aaKnown RBP3.34□□□□□ -1.87
NUP88-213ENST00000576862 UMODL1-AS1Q8N2C9 162 aa3.34□□□□□ -1.87
NUP88-213ENST00000576862 ATPAF2Q8N5M1 289 aa3.34□□□□□ -1.87
NUP88-213ENST00000576862 ZNF433Q8N7K0 673 aaPredicted RBP3.34□□□□□ -1.87
NUP88-213ENST00000576862 ATP6V1C2Q8NEY4 427 aa3.34□□□□□ -1.87
NUP88-213ENST00000576862 VN1R2Q8NFZ6 395 aa3.34□□□□□ -1.87
NUP88-213ENST00000576862 OR4K2Q8NGD2 314 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms