RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 GDNFP39905 211 aa12.74□□□□□ -0.37
CTDNEP1-211ENST00000575783 CDX1P47902 265 aaPredicted RBP12.74□□□□□ -0.37
CTDNEP1-211ENST00000575783 HCCSP53701 268 aa12.74□□□□□ -0.37
CTDNEP1-211ENST00000575783 PRRX1P54821 245 aa12.74□□□□□ -0.37
CTDNEP1-211ENST00000575783 IL24Q13007 206 aa12.74□□□□□ -0.37
CTDNEP1-211ENST00000575783 KPNB1Q14974 876 aaKnown RBP12.74□□□□□ -0.37
CTDNEP1-211ENST00000575783 HLA-DRB5Q30154 266 aa12.74□□□□□ -0.37
CTDNEP1-211ENST00000575783 SLX4IPQ5VYV7 408 aa12.74□□□□□ -0.37
CTDNEP1-211ENST00000575783 THNSL2Q86YJ6 484 aa12.74□□□□□ -0.37
CTDNEP1-211ENST00000575783 DRAM1Q8N682 238 aa12.74□□□□□ -0.37
CTDNEP1-211ENST00000575783 RNF148Q8N7C7 305 aa12.74□□□□□ -0.37
CTDNEP1-211ENST00000575783 OR56B4Q8NH76 319 aa12.74□□□□□ -0.37
CTDNEP1-211ENST00000575783 ITFG2Q969R8 447 aa12.74□□□□□ -0.37
CTDNEP1-211ENST00000575783 SLAMF9Q96A28 289 aa12.74□□□□□ -0.37
CTDNEP1-211ENST00000575783 CEP19Q96LK0 163 aa12.74□□□□□ -0.37
CTDNEP1-211ENST00000575783 GAL3ST2Q9H3Q3 398 aa12.74□□□□□ -0.37
CTDNEP1-211ENST00000575783 EFCAB1Q9HAE3 211 aa12.74□□□□□ -0.37
CTDNEP1-211ENST00000575783 MTCH1Q9NZJ7 389 aa12.74□□□□□ -0.37
CTDNEP1-211ENST00000575783 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.74□□□□□ -0.37
CTDNEP1-211ENST00000575783 UBE2J1Q9Y385 318 aaPredicted RBP12.74□□□□□ -0.37
CTDNEP1-211ENST00000575783 SIRT4Q9Y6E7 314 aaPredicted RBP12.74□□□□□ -0.37
CTDNEP1-211ENST00000575783 FAM230AA0A1W2PPH8 454 aa12.73□□□□□ -0.37
CTDNEP1-211ENST00000575783 FAM90A18PA6NE21 464 aa12.73□□□□□ -0.37
CTDNEP1-211ENST00000575783 FAM90A16PA6NEW6 464 aa12.73□□□□□ -0.37
CTDNEP1-211ENST00000575783 FAM90A20PA6NIJ5 464 aa12.73□□□□□ -0.37
CTDNEP1-211ENST00000575783 ACOD1A6NK06 481 aa12.73□□□□□ -0.37
CTDNEP1-211ENST00000575783 FAM90A9PA6NNJ1 464 aa12.73□□□□□ -0.37
CTDNEP1-211ENST00000575783 FAM90A12PA8MX19 464 aa12.73□□□□□ -0.37
CTDNEP1-211ENST00000575783 FAM90A5PA8MXJ8 464 aa12.73□□□□□ -0.37
CTDNEP1-211ENST00000575783 TNFRSF11BO00300 401 aa12.73□□□□□ -0.37
CTDNEP1-211ENST00000575783 DLGAP1O14490 977 aa12.73□□□□□ -0.37
CTDNEP1-211ENST00000575783 PSPNO60542 156 aa12.73□□□□□ -0.37
CTDNEP1-211ENST00000575783 DHRS3O75911 302 aa12.73□□□□□ -0.37
CTDNEP1-211ENST00000575783 HAND1O96004 215 aa12.73□□□□□ -0.37
CTDNEP1-211ENST00000575783 IGHG2P01859 326 aa12.73□□□□□ -0.37
CTDNEP1-211ENST00000575783 FAM90A15PP0C7V4 464 aa12.73□□□□□ -0.37
CTDNEP1-211ENST00000575783 FAM90A13PP0C7W8 464 aa12.73□□□□□ -0.37
CTDNEP1-211ENST00000575783 FAM90A14PP0C7W9 464 aa12.73□□□□□ -0.37
CTDNEP1-211ENST00000575783 FAM90A24PP0C7X0 464 aa12.73□□□□□ -0.37
CTDNEP1-211ENST00000575783 DUSP1P28562 367 aa12.73□□□□□ -0.37
CTDNEP1-211ENST00000575783 INSL3P51460 131 aa12.73□□□□□ -0.37
CTDNEP1-211ENST00000575783 GPR50Q13585 617 aa12.73□□□□□ -0.37
CTDNEP1-211ENST00000575783 C16orf89Q6UX73 402 aa12.73□□□□□ -0.37
CTDNEP1-211ENST00000575783 HEPN1Q6WQI6 88 aa12.73□□□□□ -0.37
CTDNEP1-211ENST00000575783 AQP11Q8NBQ7 271 aa12.73□□□□□ -0.37
CTDNEP1-211ENST00000575783 RPEQ96AT9 228 aa12.73□□□□□ -0.37
CTDNEP1-211ENST00000575783 PKIBQ9C010 78 aa12.73□□□□□ -0.37
CTDNEP1-211ENST00000575783 IL1RAPQ9NPH3 570 aa12.73□□□□□ -0.37
CTDNEP1-211ENST00000575783 LAMP5Q9UJQ1 280 aa12.73□□□□□ -0.37
CTDNEP1-211ENST00000575783 PCLOQ9Y6V0 5065 aa12.72□□□□□ -0.37
CTDNEP1-211ENST00000575783 TRGV10A0A0A0MS01 117 aa12.72□□□□□ -0.37
CTDNEP1-211ENST00000575783 OOSP1A8MZH6 123 aa12.72□□□□□ -0.37
CTDNEP1-211ENST00000575783 FGF16O43320 207 aa12.72□□□□□ -0.37
CTDNEP1-211ENST00000575783 KRT36O76013 467 aa12.72□□□□□ -0.37
CTDNEP1-211ENST00000575783 P2RX3P56373 397 aa12.72□□□□□ -0.37
CTDNEP1-211ENST00000575783 PSME3P61289 254 aa12.72□□□□□ -0.37
CTDNEP1-211ENST00000575783 TMEM42Q69YG0 159 aa12.72□□□□□ -0.37
CTDNEP1-211ENST00000575783 IQCF1Q8N6M8 205 aa12.72□□□□□ -0.37
CTDNEP1-211ENST00000575783 OR11H1Q8NG94 326 aa12.72□□□□□ -0.37
CTDNEP1-211ENST00000575783 TOMM40LQ969M1 308 aa12.72□□□□□ -0.37
CTDNEP1-211ENST00000575783 HRASLS5Q96KN8 279 aa12.72□□□□□ -0.37
CTDNEP1-211ENST00000575783 TM2D3Q9BRN9 247 aa12.72□□□□□ -0.37
CTDNEP1-211ENST00000575783 CADM1Q9BY67 442 aaKnown RBP12.72□□□□□ -0.37
CTDNEP1-211ENST00000575783 GORASP2Q9H8Y8 452 aa12.72□□□□□ -0.37
CTDNEP1-211ENST00000575783 IL36RNQ9UBH0 155 aa12.72□□□□□ -0.37
CTDNEP1-211ENST00000575783 DNAJB9Q9UBS3 223 aa12.72□□□□□ -0.37
CTDNEP1-211ENST00000575783 GLS2Q9UI32 602 aa12.72□□□□□ -0.37
CTDNEP1-211ENST00000575783 GTF2A1LQ9UNN4 478 aa12.72□□□□□ -0.37
CTDNEP1-211ENST00000575783 SLC7A11Q9UPY5 501 aa12.72□□□□□ -0.37
CTDNEP1-211ENST00000575783 U3KQV3 271 aa12.72□□□□□ -0.37
CTDNEP1-211ENST00000575783 AP4M1O00189 453 aa12.71□□□□□ -0.37
CTDNEP1-211ENST00000575783 CCRL2O00421 344 aa12.71□□□□□ -0.37
CTDNEP1-211ENST00000575783 MGST3O14880 152 aa12.71□□□□□ -0.37
CTDNEP1-211ENST00000575783 CCNB2O95067 398 aa12.71□□□□□ -0.37
CTDNEP1-211ENST00000575783 IGLV3-1P01715 115 aa12.71□□□□□ -0.37
CTDNEP1-211ENST00000575783 SPNP16150 400 aa12.71□□□□□ -0.37
CTDNEP1-211ENST00000575783 ALOX5APP20292 161 aa12.71□□□□□ -0.37
CTDNEP1-211ENST00000575783 HMGA2P52926 109 aa12.71□□□□□ -0.37
CTDNEP1-211ENST00000575783 PPP1R8Q12972 351 aaKnown RBP12.71□□□□□ -0.37
CTDNEP1-211ENST00000575783 UTF1Q5T230 341 aa12.71□□□□□ -0.37
CTDNEP1-211ENST00000575783 EMG1Q92979 244 aaKnown RBP12.71□□□□□ -0.37
CTDNEP1-211ENST00000575783 MROQ9BYG7 248 aa12.71□□□□□ -0.37
CTDNEP1-211ENST00000575783 ABCD2Q9UBJ2 740 aa12.71□□□□□ -0.37
CTDNEP1-211ENST00000575783 TRIM64CA6NLI5 447 aa12.7□□□□□ -0.38
CTDNEP1-211ENST00000575783 LDLRAD4O15165 306 aa12.7□□□□□ -0.38
CTDNEP1-211ENST00000575783 CALCBP10092 127 aa12.7□□□□□ -0.38
CTDNEP1-211ENST00000575783 NFYBP25208 207 aa12.7□□□□□ -0.38
CTDNEP1-211ENST00000575783 CD34P28906 385 aa12.7□□□□□ -0.38
CTDNEP1-211ENST00000575783 ERP29P30040 261 aaKnown RBP12.7□□□□□ -0.38
CTDNEP1-211ENST00000575783 VEGFCP49767 419 aa12.7□□□□□ -0.38
CTDNEP1-211ENST00000575783 SNU13P55769 128 aaKnown RBP12.7□□□□□ -0.38
CTDNEP1-211ENST00000575783 FOXE3Q13461 319 aa12.7□□□□□ -0.38
CTDNEP1-211ENST00000575783 FHL3Q13643 280 aa12.7□□□□□ -0.38
CTDNEP1-211ENST00000575783 SLC25A26Q70HW3 274 aa12.7□□□□□ -0.38
CTDNEP1-211ENST00000575783 ZNF429Q86V71 674 aa12.7□□□□□ -0.38
CTDNEP1-211ENST00000575783 OR4D6Q8NGJ1 314 aa12.7□□□□□ -0.38
CTDNEP1-211ENST00000575783 C4orf3Q8WVX3 66 aa12.7□□□□□ -0.38
CTDNEP1-211ENST00000575783 GON7Q9BXV9 100 aa12.7□□□□□ -0.38
CTDNEP1-211ENST00000575783 PCDHB16Q9NRJ7 776 aa12.7□□□□□ -0.38
CTDNEP1-211ENST00000575783 FGFR1OP2Q9NVK5 253 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms