RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 IL36RNQ9UBH0 155 aa14.26□□□□□ -0.13
NUP88-210ENST00000574867 OR14J1Q9UGF5 321 aa14.26□□□□□ -0.13
NUP88-210ENST00000574867 OTOGQ6ZRI0 2925 aa14.25□□□□□ -0.13
NUP88-210ENST00000574867 H7C1Q1 480 aa14.25□□□□□ -0.13
NUP88-210ENST00000574867 CRTAPO75718 401 aaPredicted RBP14.25□□□□□ -0.13
NUP88-210ENST00000574867 VSIG8P0DPA2 414 aa14.25□□□□□ -0.13
NUP88-210ENST00000574867 MGMTP16455 207 aa14.25□□□□□ -0.13
NUP88-210ENST00000574867 PRDX2P32119 198 aa14.25□□□□□ -0.13
NUP88-210ENST00000574867 RBM11P57052 281 aaKnown RBP14.25□□□□□ -0.13
NUP88-210ENST00000574867 IL13RA1P78552 427 aa14.25□□□□□ -0.13
NUP88-210ENST00000574867 ZNF561Q8N587 486 aa14.25□□□□□ -0.13
NUP88-210ENST00000574867 FAM3DQ96BQ1 224 aa14.25□□□□□ -0.13
NUP88-210ENST00000574867 ISOC1Q96CN7 298 aa14.25□□□□□ -0.13
NUP88-210ENST00000574867 GAFA1Q96PS6 74 aa14.25□□□□□ -0.13
NUP88-210ENST00000574867 CCL13Q99616 98 aa14.25□□□□□ -0.13
NUP88-210ENST00000574867 LIN7BQ9HAP6 207 aa14.25□□□□□ -0.13
NUP88-210ENST00000574867 FBLN5Q9UBX5 448 aa14.25□□□□□ -0.13
NUP88-210ENST00000574867 AKAP9Q99996 3911 aa14.25□□□□□ -0.13
NUP88-210ENST00000574867 SH2D1BO14796 132 aa14.24□□□□□ -0.13
NUP88-210ENST00000574867 SIGLEC5O15389 551 aa14.24□□□□□ -0.13
NUP88-210ENST00000574867 HAND1O96004 215 aa14.24□□□□□ -0.13
NUP88-210ENST00000574867 CHRM2P08172 466 aa14.24□□□□□ -0.13
NUP88-210ENST00000574867 WNT2P09544 360 aa14.24□□□□□ -0.13
NUP88-210ENST00000574867 CALCBP10092 127 aa14.24□□□□□ -0.13
NUP88-210ENST00000574867 RPS19P39019 145 aaKnown RBP14.24□□□□□ -0.13
NUP88-210ENST00000574867 GABRA2P47869 451 aa14.24□□□□□ -0.13
NUP88-210ENST00000574867 SNU13P55769 128 aaKnown RBP14.24□□□□□ -0.13
NUP88-210ENST00000574867 LYPD2Q6UXB3 125 aa14.24□□□□□ -0.13
NUP88-210ENST00000574867 CD177Q8N6Q3 437 aa14.24□□□□□ -0.13
NUP88-210ENST00000574867 SLC25A46Q96AG3 418 aa14.24□□□□□ -0.13
NUP88-210ENST00000574867 COX4I2Q96KJ9 171 aa14.24□□□□□ -0.13
NUP88-210ENST00000574867 MRI1Q9BV20 369 aa14.24□□□□□ -0.13
NUP88-210ENST00000574867 CTSZQ9UBR2 303 aa14.24□□□□□ -0.13
NUP88-210ENST00000574867 DAPK2Q9UIK4 370 aa14.24□□□□□ -0.13
NUP88-210ENST00000574867 ST3GAL6Q9Y274 331 aa14.24□□□□□ -0.13
NUP88-210ENST00000574867 CEPT1Q9Y6K0 416 aa14.24□□□□□ -0.13
NUP88-210ENST00000574867 CR1P17927 2039 aa14.24□□□□□ -0.13
NUP88-210ENST00000574867 TMEM14DPA8MWL7 114 aa14.24□□□□□ -0.13
NUP88-210ENST00000574867 AMY2BP19961 511 aa14.24□□□□□ -0.13
NUP88-210ENST00000574867 PITPNBP48739 271 aa14.24□□□□□ -0.13
NUP88-210ENST00000574867 NPY4RP50391 375 aa14.24□□□□□ -0.13
NUP88-210ENST00000574867 CAV3P56539 151 aa14.24□□□□□ -0.13
NUP88-210ENST00000574867 CLDN12P56749 244 aa14.24□□□□□ -0.13
NUP88-210ENST00000574867 PIGYQ3MUY2 71 aa14.24□□□□□ -0.13
NUP88-210ENST00000574867 ESCO2Q56NI9 601 aa14.24□□□□□ -0.13
NUP88-210ENST00000574867 FAM216BQ8N7L0 139 aa14.24□□□□□ -0.13
NUP88-210ENST00000574867 CHST4Q8NCG5 386 aa14.24□□□□□ -0.13
NUP88-210ENST00000574867 TMEM104Q8NE00 496 aa14.24□□□□□ -0.13
NUP88-210ENST00000574867 OR51D1Q8NGF3 324 aa14.24□□□□□ -0.13
NUP88-210ENST00000574867 POM121Q96HA1 1249 aa14.24□□□□□ -0.13
NUP88-210ENST00000574867 TMEM59Q9BXS4 323 aa14.24□□□□□ -0.13
NUP88-210ENST00000574867 RBM38Q9H0Z9 239 aaKnown RBP14.24□□□□□ -0.13
NUP88-210ENST00000574867 DCSTAMPQ9H295 470 aa14.24□□□□□ -0.13
NUP88-210ENST00000574867 SMIM31A0A1B0GVY4 71 aa14.23□□□□□ -0.13
NUP88-210ENST00000574867 A0A1W2PP11 408 aa14.23□□□□□ -0.13
NUP88-210ENST00000574867 SCAND1P57086 179 aa14.23□□□□□ -0.13
NUP88-210ENST00000574867 QRFPP83859 136 aa14.23□□□□□ -0.13
NUP88-210ENST00000574867 MPV17LQ2QL34 196 aa14.23□□□□□ -0.13
NUP88-210ENST00000574867 NDNFQ8TB73 568 aa14.23□□□□□ -0.13
NUP88-210ENST00000574867 FAM46BQ96A09 425 aa14.23□□□□□ -0.13
NUP88-210ENST00000574867 CLN8Q9UBY8 286 aa14.23□□□□□ -0.13
NUP88-210ENST00000574867 FAM90A10PA6NDY2 464 aa14.22□□□□□ -0.13
NUP88-210ENST00000574867 FAM90A18PA6NE21 464 aa14.22□□□□□ -0.13
NUP88-210ENST00000574867 FAM90A16PA6NEW6 464 aa14.22□□□□□ -0.13
NUP88-210ENST00000574867 CCDC160A6NGH7 325 aa14.22□□□□□ -0.13
NUP88-210ENST00000574867 FAM90A20PA6NIJ5 464 aa14.22□□□□□ -0.13
NUP88-210ENST00000574867 FAM90A8PA6NJQ4 464 aa14.22□□□□□ -0.13
NUP88-210ENST00000574867 FAM90A7PA6NKC0 464 aa14.22□□□□□ -0.13
NUP88-210ENST00000574867 FAM90A22PA8MWA6 464 aa14.22□□□□□ -0.13
NUP88-210ENST00000574867 FAM90A12PA8MX19 464 aa14.22□□□□□ -0.13
NUP88-210ENST00000574867 FAM90A5PA8MXJ8 464 aa14.22□□□□□ -0.13
NUP88-210ENST00000574867 FAM90A23PA8MXZ1 464 aa14.22□□□□□ -0.13
NUP88-210ENST00000574867 ZNF701M0R085 212 aaPredicted RBP14.22□□□□□ -0.13
NUP88-210ENST00000574867 MPIG6BO95866 241 aa14.22□□□□□ -0.13
NUP88-210ENST00000574867 FAM90A15PP0C7V4 464 aa14.22□□□□□ -0.13
NUP88-210ENST00000574867 FAM90A13PP0C7W8 464 aa14.22□□□□□ -0.13
NUP88-210ENST00000574867 FAM90A14PP0C7W9 464 aa14.22□□□□□ -0.13
NUP88-210ENST00000574867 FAM90A24PP0C7X0 464 aa14.22□□□□□ -0.13
NUP88-210ENST00000574867 SLC2A2P11168 524 aaPredicted RBP14.22□□□□□ -0.13
NUP88-210ENST00000574867 IL2RGP31785 369 aa14.22□□□□□ -0.13
NUP88-210ENST00000574867 CEBPDP49716 269 aaPredicted RBP14.22□□□□□ -0.13
NUP88-210ENST00000574867 UNC119Q13432 240 aa14.22□□□□□ -0.13
NUP88-210ENST00000574867 LRRC10Q5BKY1 277 aa14.22□□□□□ -0.13
NUP88-210ENST00000574867 C1orf159Q96HA4 380 aa14.22□□□□□ -0.13
NUP88-210ENST00000574867 Q96M66 194 aa14.22□□□□□ -0.13
NUP88-210ENST00000574867 SELENOIQ9C0D9 397 aa14.22□□□□□ -0.13
NUP88-210ENST00000574867 FAM234AQ9H0X4 552 aa14.22□□□□□ -0.13
NUP88-210ENST00000574867 BANF2Q9H503 90 aa14.22□□□□□ -0.13
NUP88-210ENST00000574867 IFT22Q9H7X7 185 aa14.22□□□□□ -0.13
NUP88-210ENST00000574867 NDUFA13Q9P0J0 144 aa14.22□□□□□ -0.13
NUP88-210ENST00000574867 MAP1AP78559 2803 aaPredicted RBP14.22□□□□□ -0.13
NUP88-210ENST00000574867 A8MXK9 166 aa14.22□□□□□ -0.13
NUP88-210ENST00000574867 H3BMQ9 156 aa14.22□□□□□ -0.13
NUP88-210ENST00000574867 NDUFB3O43676 98 aa14.22□□□□□ -0.13
NUP88-210ENST00000574867 OR2H2O95918 312 aa14.22□□□□□ -0.13
NUP88-210ENST00000574867 ZNF44P15621 663 aa14.22□□□□□ -0.13
NUP88-210ENST00000574867 DUSP1P28562 367 aa14.22□□□□□ -0.13
NUP88-210ENST00000574867 RPS27AP62979 156 aaKnown RBP14.22□□□□□ -0.13
NUP88-210ENST00000574867 COL10A1Q03692 680 aa14.22□□□□□ -0.13
NUP88-210ENST00000574867 IKZF1Q13422 519 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms