RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 DNAJB9Q9UBS3 223 aa9.44□□□□□ -0.9
CTNS-208ENST00000574218 IKZF2Q9UKS7 526 aa9.44□□□□□ -0.9
CTNS-208ENST00000574218 KLHDC2Q9Y2U9 406 aa9.44□□□□□ -0.9
CTNS-208ENST00000574218 SIRT4Q9Y6E7 314 aaPredicted RBP9.44□□□□□ -0.9
CTNS-208ENST00000574218 LYSTQ99698 3801 aa9.43□□□□□ -0.9
CTNS-208ENST00000574218 DNAH1Q9P2D7 4330 aa9.43□□□□□ -0.9
CTNS-208ENST00000574218 FUOMA2VDF0 154 aa9.43□□□□□ -0.9
CTNS-208ENST00000574218 FAM172BPA6NC97 362 aa9.43□□□□□ -0.9
CTNS-208ENST00000574218 OOSP1A8MZH6 123 aa9.43□□□□□ -0.9
CTNS-208ENST00000574218 MGST3O14880 152 aa9.43□□□□□ -0.9
CTNS-208ENST00000574218 PRODHO43272 600 aa9.43□□□□□ -0.9
CTNS-208ENST00000574218 ZNF254O75437 659 aa9.43□□□□□ -0.9
CTNS-208ENST00000574218 INMTO95050 263 aa9.43□□□□□ -0.9
CTNS-208ENST00000574218 HAND1O96004 215 aa9.43□□□□□ -0.9
CTNS-208ENST00000574218 CYB5AP00167 134 aa9.43□□□□□ -0.9
CTNS-208ENST00000574218 CDK2P24941 298 aa9.43□□□□□ -0.9
CTNS-208ENST00000574218 KPNB1Q14974 876 aaKnown RBP9.43□□□□□ -0.9
CTNS-208ENST00000574218 SLC35D3Q5M8T2 416 aa9.43□□□□□ -0.9
CTNS-208ENST00000574218 TPTE2P1Q5T6R2 138 aa9.43□□□□□ -0.9
CTNS-208ENST00000574218 TEX38Q6PEX7 206 aa9.43□□□□□ -0.9
CTNS-208ENST00000574218 SLC35E3Q7Z769 313 aa9.43□□□□□ -0.9
CTNS-208ENST00000574218 EGFL6Q8IUX8 553 aa9.43□□□□□ -0.9
CTNS-208ENST00000574218 IQCF1Q8N6M8 205 aa9.43□□□□□ -0.9
CTNS-208ENST00000574218 RPEQ96AT9 228 aa9.43□□□□□ -0.9
CTNS-208ENST00000574218 RAX2Q96IS3 184 aa9.43□□□□□ -0.9
CTNS-208ENST00000574218 DGCR6LQ9BY27 220 aa9.43□□□□□ -0.9
CTNS-208ENST00000574218 CCDC134Q9H6E4 229 aa9.43□□□□□ -0.9
CTNS-208ENST00000574218 MOB1AQ9H8S9 216 aa9.43□□□□□ -0.9
CTNS-208ENST00000574218 REEP1Q9H902 201 aa9.43□□□□□ -0.9
CTNS-208ENST00000574218 PLEKHA1Q9HB21 404 aa9.43□□□□□ -0.9
CTNS-208ENST00000574218 GAR1Q9NY12 217 aaKnown RBP9.43□□□□□ -0.9
CTNS-208ENST00000574218 NUFIP1Q9UHK0 495 aaKnown RBP9.43□□□□□ -0.9
CTNS-208ENST00000574218 HHLA2Q9UM44 414 aa9.43□□□□□ -0.9
CTNS-208ENST00000574218 TMEM82A0PJX8 343 aa9.42□□□□□ -0.9
CTNS-208ENST00000574218 LOC110117498-PIK3R3F6TDL0 507 aa9.42□□□□□ -0.9
CTNS-208ENST00000574218 ARPC2O15144 300 aa9.42□□□□□ -0.9
CTNS-208ENST00000574218 HSD17B1P14061 328 aa9.42□□□□□ -0.9
CTNS-208ENST00000574218 TMEM11P17152 192 aa9.42□□□□□ -0.9
CTNS-208ENST00000574218 ALOX5APP20292 161 aa9.42□□□□□ -0.9
CTNS-208ENST00000574218 P2RX3P56373 397 aa9.42□□□□□ -0.9
CTNS-208ENST00000574218 ERVK11-1P61568 191 aa9.42□□□□□ -0.9
CTNS-208ENST00000574218 PPP1R8Q12972 351 aaKnown RBP9.42□□□□□ -0.9
CTNS-208ENST00000574218 HLA-DRB5Q30154 266 aa9.42□□□□□ -0.9
CTNS-208ENST00000574218 CXorf66Q5JRM2 361 aaPredicted RBP9.42□□□□□ -0.9
CTNS-208ENST00000574218 BCL2L15Q5TBC7 163 aa9.42□□□□□ -0.9
CTNS-208ENST00000574218 ZFAND6Q6FIF0 208 aa9.42□□□□□ -0.9
CTNS-208ENST00000574218 HDXQ7Z353 690 aa9.42□□□□□ -0.9
CTNS-208ENST00000574218 Q8IYB0 196 aa9.42□□□□□ -0.9
CTNS-208ENST00000574218 OR4D6Q8NGJ1 314 aa9.42□□□□□ -0.9
CTNS-208ENST00000574218 TOMM40LQ969M1 308 aa9.42□□□□□ -0.9
CTNS-208ENST00000574218 SLAMF9Q96A28 289 aa9.42□□□□□ -0.9
CTNS-208ENST00000574218 HRASLS5Q96KN8 279 aa9.42□□□□□ -0.9
CTNS-208ENST00000574218 TEX12Q9BXU0 123 aa9.42□□□□□ -0.9
CTNS-208ENST00000574218 GON7Q9BXV9 100 aa9.42□□□□□ -0.9
CTNS-208ENST00000574218 YIPF3Q9GZM5 350 aa9.42□□□□□ -0.9
CTNS-208ENST00000574218 LINC00527Q9UJ94 153 aa9.42□□□□□ -0.9
CTNS-208ENST00000574218 SAMHD1Q9Y3Z3 626 aaKnown RBP9.42□□□□□ -0.9
CTNS-208ENST00000574218 AMMECR1Q9Y4X0 333 aaPredicted RBP9.42□□□□□ -0.9
CTNS-208ENST00000574218 TMEM14AQ9Y6G1 99 aa9.42□□□□□ -0.9
CTNS-208ENST00000574218 U3KQV3 271 aa9.42□□□□□ -0.9
CTNS-208ENST00000574218 A6NIN4 97 aa9.41□□□□□ -0.9
CTNS-208ENST00000574218 BUB1B-PAK6H3BSN5 160 aa9.41□□□□□ -0.9
CTNS-208ENST00000574218 GATBO75879 557 aaKnown RBP9.41□□□□□ -0.9
CTNS-208ENST00000574218 MMP23AO75900 390 aa9.41□□□□□ -0.9
CTNS-208ENST00000574218 IGLV1-47P01700 117 aa9.41□□□□□ -0.9
CTNS-208ENST00000574218 IGLV3-1P01715 115 aa9.41□□□□□ -0.9
CTNS-208ENST00000574218 IGHA1P01876 353 aa9.41□□□□□ -0.9
CTNS-208ENST00000574218 HMGN1P05114 100 aa9.41□□□□□ -0.9
CTNS-208ENST00000574218 SNRNP70P08621 437 aaKnown RBP9.41□□□□□ -0.9
CTNS-208ENST00000574218 PTGFRP43088 359 aa9.41□□□□□ -0.9
CTNS-208ENST00000574218 ACTR3P61158 418 aa9.41□□□□□ -0.9
CTNS-208ENST00000574218 MICAQ29983 383 aa9.41□□□□□ -0.9
CTNS-208ENST00000574218 DEFB136Q30KP8 78 aa9.41□□□□□ -0.9
CTNS-208ENST00000574218 ZNF260Q3ZCT1 412 aa9.41□□□□□ -0.9
CTNS-208ENST00000574218 FAM27D1Q5T7N8 215 aa9.41□□□□□ -0.9
CTNS-208ENST00000574218 TMEM42Q69YG0 159 aa9.41□□□□□ -0.9
CTNS-208ENST00000574218 HEPN1Q6WQI6 88 aa9.41□□□□□ -0.9
CTNS-208ENST00000574218 LCNL1Q6ZST4 164 aa9.41□□□□□ -0.9
CTNS-208ENST00000574218 ZNF679Q8IYX0 411 aa9.41□□□□□ -0.9
CTNS-208ENST00000574218 STPG2Q8N412 459 aa9.41□□□□□ -0.9
CTNS-208ENST00000574218 ASB17Q8WXJ9 295 aa9.41□□□□□ -0.9
CTNS-208ENST00000574218 CADM1Q9BY67 442 aaKnown RBP9.41□□□□□ -0.9
CTNS-208ENST00000574218 ZNF286AQ9HBT8 521 aa9.41□□□□□ -0.9
CTNS-208ENST00000574218 TAS2R3Q9NYW6 316 aa9.41□□□□□ -0.9
CTNS-208ENST00000574218 V9GYS6 101 aa9.41□□□□□ -0.9
CTNS-208ENST00000574218 DHRS7CA6NNS2 312 aa9.4□□□□□ -0.9
CTNS-208ENST00000574218 FGF16O43320 207 aa9.4□□□□□ -0.9
CTNS-208ENST00000574218 TTRP02766 147 aa9.4□□□□□ -0.9
CTNS-208ENST00000574218 MRPL3P09001 348 aaKnown RBP9.4□□□□□ -0.9
CTNS-208ENST00000574218 ERP29P30040 261 aaKnown RBP9.4□□□□□ -0.9
CTNS-208ENST00000574218 HCCSP53701 268 aa9.4□□□□□ -0.9
CTNS-208ENST00000574218 SNU13P55769 128 aaKnown RBP9.4□□□□□ -0.9
CTNS-208ENST00000574218 ZNF91Q05481 1191 aa9.4□□□□□ -0.9
CTNS-208ENST00000574218 PNLIPRP3Q17RR3 467 aa9.4□□□□□ -0.9
CTNS-208ENST00000574218 BAIAP2L2Q6UXY1 529 aa9.4□□□□□ -0.9
CTNS-208ENST00000574218 SLC25A26Q70HW3 274 aa9.4□□□□□ -0.9
CTNS-208ENST00000574218 THNSL2Q86YJ6 484 aa9.4□□□□□ -0.9
CTNS-208ENST00000574218 CPOQ8IVL8 374 aa9.4□□□□□ -0.9
CTNS-208ENST00000574218 SBSPONQ8IVN8 264 aa9.4□□□□□ -0.9
CTNS-208ENST00000574218 C5orf56Q8N8D9 126 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms