RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 PATE4P0C8F1 98 aa16.53■□□□□ 0.24
SCARF1-206ENST00000573852 ASCL1P50553 236 aa16.53■□□□□ 0.24
SCARF1-206ENST00000573852 LINC00469Q8N7U9 141 aa16.53■□□□□ 0.24
SCARF1-206ENST00000573852 BORCS8Q96FH0 119 aa16.53■□□□□ 0.24
SCARF1-206ENST00000573852 SRXN1Q9BYN0 137 aa16.53■□□□□ 0.24
SCARF1-206ENST00000573852 ZNF576Q9H609 170 aa16.53■□□□□ 0.24
SCARF1-206ENST00000573852 TUBA4BQ9H853 241 aa16.53■□□□□ 0.24
SCARF1-206ENST00000573852 OCIAD1Q9NX40 245 aa16.53■□□□□ 0.24
SCARF1-206ENST00000573852 RCL1Q9Y2P8 373 aaKnown RBP16.53■□□□□ 0.24
SCARF1-206ENST00000573852 FBXO7Q9Y3I1 522 aa16.53■□□□□ 0.24
SCARF1-206ENST00000573852 U3KQA8 63 aa16.53■□□□□ 0.24
SCARF1-206ENST00000573852 A0A1B0GV50 99 aa16.53■□□□□ 0.24
SCARF1-206ENST00000573852 UMAD1C9J7I0 102 aa16.53■□□□□ 0.24
SCARF1-206ENST00000573852 ST8SIA3O43173 380 aa16.53■□□□□ 0.24
SCARF1-206ENST00000573852 LCATP04180 440 aa16.53■□□□□ 0.24
SCARF1-206ENST00000573852 NTF4P34130 210 aa16.53■□□□□ 0.24
SCARF1-206ENST00000573852 IL13RA2Q14627 380 aa16.53■□□□□ 0.24
SCARF1-206ENST00000573852 RAB35Q15286 201 aa16.53■□□□□ 0.24
SCARF1-206ENST00000573852 CNN3Q15417 329 aaKnown RBP16.53■□□□□ 0.24
SCARF1-206ENST00000573852 KDF1Q8NAX2 398 aaPredicted RBP16.53■□□□□ 0.24
SCARF1-206ENST00000573852 CACNA1EQ15878 2313 aa16.52■□□□□ 0.24
SCARF1-206ENST00000573852 NSG1A0A0A6YYJ2 146 aa16.52■□□□□ 0.24
SCARF1-206ENST00000573852 hCG_1809904A0A1W2PP81 198 aa16.52■□□□□ 0.24
SCARF1-206ENST00000573852 A0A1W2PR64 198 aa16.52■□□□□ 0.24
SCARF1-206ENST00000573852 A0A1W2PRV1 198 aa16.52■□□□□ 0.24
SCARF1-206ENST00000573852 PHF1O43189 567 aaPredicted RBP16.52■□□□□ 0.24
SCARF1-206ENST00000573852 DSCR4P56555 118 aaPredicted RBP16.52■□□□□ 0.24
SCARF1-206ENST00000573852 LGI3Q8N145 548 aa16.52■□□□□ 0.24
SCARF1-206ENST00000573852 TAAR9Q96RI9 348 aa16.52■□□□□ 0.24
SCARF1-206ENST00000573852 RFNGQ9Y644 331 aa16.52■□□□□ 0.24
SCARF1-206ENST00000573852 ARG1P05089 322 aa16.52■□□□□ 0.23
SCARF1-206ENST00000573852 OSR2Q8N2R0 312 aa16.52■□□□□ 0.23
SCARF1-206ENST00000573852 OR1F12Q8NHA8 337 aa16.52■□□□□ 0.23
SCARF1-206ENST00000573852 AKR7LQ8NHP1 331 aa16.52■□□□□ 0.23
SCARF1-206ENST00000573852 KIAA1549Q9HCM3 1950 aa16.51■□□□□ 0.23
SCARF1-206ENST00000573852 PPP1CCP36873 323 aaKnown RBP16.51■□□□□ 0.23
SCARF1-206ENST00000573852 GLP1RP43220 463 aa16.51■□□□□ 0.23
SCARF1-206ENST00000573852 TMEM182Q6ZP80 229 aaPredicted RBP16.51■□□□□ 0.23
SCARF1-206ENST00000573852 MOB3AQ96BX8 217 aa16.51■□□□□ 0.23
SCARF1-206ENST00000573852 INTS12Q96CB8 462 aaKnown RBP16.51■□□□□ 0.23
SCARF1-206ENST00000573852 TP53RKQ96S44 253 aa16.51■□□□□ 0.23
SCARF1-206ENST00000573852 PHF7Q9BWX1 381 aaPredicted RBP16.51■□□□□ 0.23
SCARF1-206ENST00000573852 BCO1Q9HAY6 547 aa16.51■□□□□ 0.23
SCARF1-206ENST00000573852 DKKL1Q9UK85 242 aa16.51■□□□□ 0.23
SCARF1-206ENST00000573852 ST3GAL6Q9Y274 331 aa16.51■□□□□ 0.23
SCARF1-206ENST00000573852 NRASP01111 189 aa16.51■□□□□ 0.23
SCARF1-206ENST00000573852 RAB5AP20339 215 aa16.51■□□□□ 0.23
SCARF1-206ENST00000573852 AADACP22760 399 aa16.51■□□□□ 0.23
SCARF1-206ENST00000573852 LHFPL2Q6ZUX7 228 aa16.51■□□□□ 0.23
SCARF1-206ENST00000573852 FAM24BQ8N5W8 94 aa16.51■□□□□ 0.23
SCARF1-206ENST00000573852 SLC35G3Q8N808 338 aa16.51■□□□□ 0.23
SCARF1-206ENST00000573852 ZNF286AQ9HBT8 521 aa16.51■□□□□ 0.23
SCARF1-206ENST00000573852 CRLF2Q9HC73 371 aa16.51■□□□□ 0.23
SCARF1-206ENST00000573852 STRAPQ9Y3F4 350 aaKnown RBP16.51■□□□□ 0.23
SCARF1-206ENST00000573852 OR13C7P0DN81 318 aa16.5■□□□□ 0.23
SCARF1-206ENST00000573852 ZNF14P17017 642 aaPredicted RBP16.5■□□□□ 0.23
SCARF1-206ENST00000573852 FABP9Q0Z7S8 132 aa16.5■□□□□ 0.23
SCARF1-206ENST00000573852 MEX3BQ6ZN04 569 aaKnown RBP16.5■□□□□ 0.23
SCARF1-206ENST00000573852 OR4D5Q8NGN0 318 aa16.5■□□□□ 0.23
SCARF1-206ENST00000573852 CD300LFQ8TDQ1 290 aa16.5■□□□□ 0.23
SCARF1-206ENST00000573852 SYT3Q9BQG1 590 aa16.5■□□□□ 0.23
SCARF1-206ENST00000573852 SLC35B3Q9H1N7 401 aa16.5■□□□□ 0.23
SCARF1-206ENST00000573852 A0A1W2PPE2 198 aa16.5■□□□□ 0.23
SCARF1-206ENST00000573852 S100A8P05109 93 aa16.5■□□□□ 0.23
SCARF1-206ENST00000573852 ZNF806P0C7X5 589 aa16.5■□□□□ 0.23
SCARF1-206ENST00000573852 SMIM6P0DI80 62 aa16.5■□□□□ 0.23
SCARF1-206ENST00000573852 SULT1A1P50225 295 aa16.5■□□□□ 0.23
SCARF1-206ENST00000573852 RAB5CP51148 216 aa16.5■□□□□ 0.23
SCARF1-206ENST00000573852 TMEM42Q69YG0 159 aa16.5■□□□□ 0.23
SCARF1-206ENST00000573852 GPR137CQ8N3F9 429 aa16.5■□□□□ 0.23
SCARF1-206ENST00000573852 FAM213BQ8TBF2 198 aa16.5■□□□□ 0.23
SCARF1-206ENST00000573852 RSRP1Q9BUV0 290 aa16.5■□□□□ 0.23
SCARF1-206ENST00000573852 IGHV1-45A0A0A0MS14 117 aa16.49■□□□□ 0.23
SCARF1-206ENST00000573852 ZNF32P17041 273 aa16.49■□□□□ 0.23
SCARF1-206ENST00000573852 IGFBP4P22692 258 aa16.49■□□□□ 0.23
SCARF1-206ENST00000573852 UCP3P55916 312 aa16.49■□□□□ 0.23
SCARF1-206ENST00000573852 EWSR1Q01844 656 aaKnown RBP eCLIP16.49■□□□□ 0.23
SCARF1-206ENST00000573852 KCNJ16Q9NPI9 418 aa16.49■□□□□ 0.23
SCARF1-206ENST00000573852 LOC102723996A0A087X1L8 192 aa16.49■□□□□ 0.23
SCARF1-206ENST00000573852 LINC00587B1AMM8 73 aa16.49■□□□□ 0.23
SCARF1-206ENST00000573852 K7N7A8 449 aa16.49■□□□□ 0.23
SCARF1-206ENST00000573852 B4GALT1P15291 398 aa16.49■□□□□ 0.23
SCARF1-206ENST00000573852 PMELP40967 661 aa16.49■□□□□ 0.23
SCARF1-206ENST00000573852 BATF2Q8N1L9 274 aa16.49■□□□□ 0.23
SCARF1-206ENST00000573852 BOD1Q96IK1 185 aa16.49■□□□□ 0.23
SCARF1-206ENST00000573852 RARRES2Q99969 163 aa16.49■□□□□ 0.23
SCARF1-206ENST00000573852 SEBOXQ9HB31 216 aaPredicted RBP16.49■□□□□ 0.23
SCARF1-206ENST00000573852 TMED3Q9Y3Q3 217 aa16.49■□□□□ 0.23
SCARF1-206ENST00000573852 FAM24AA6NFZ4 105 aa16.48■□□□□ 0.23
SCARF1-206ENST00000573852 UMODP07911 640 aa16.48■□□□□ 0.23
SCARF1-206ENST00000573852 CST2P09228 141 aa16.48■□□□□ 0.23
SCARF1-206ENST00000573852 RAC1P63000 192 aa16.48■□□□□ 0.23
SCARF1-206ENST00000573852 IMMP1LQ96LU5 166 aa16.48■□□□□ 0.23
SCARF1-206ENST00000573852 TMEM38BQ9NVV0 291 aa16.48■□□□□ 0.23
SCARF1-206ENST00000573852 MRPS17Q9Y2R5 130 aaKnown RBP16.48■□□□□ 0.23
SCARF1-206ENST00000573852 NKX2-6A6NCS4 301 aa16.48■□□□□ 0.23
SCARF1-206ENST00000573852 OR6C6A6NF89 314 aa16.48■□□□□ 0.23
SCARF1-206ENST00000573852 PDCD6O75340 191 aa16.48■□□□□ 0.23
SCARF1-206ENST00000573852 HTR5AP47898 357 aa16.48■□□□□ 0.23
SCARF1-206ENST00000573852 DAZAP2Q15038 168 aaPredicted RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms