RNA–Protein interactions for RNA: ENST00000570510.6

VPS53-207, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 4

Gene VPS53, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-207ENST00000570510 ZNF829Q3KNS6 432 aaPredicted RBP8.81□□□□□ -1
VPS53-207ENST00000570510 MINOS1Q5TGZ0 78 aa8.81□□□□□ -1
VPS53-207ENST00000570510 ZNF626Q68DY1 528 aa8.81□□□□□ -1
VPS53-207ENST00000570510 PACRGLQ8N7B6 248 aa8.81□□□□□ -1
VPS53-207ENST00000570510 TCEANCQ8N8B7 351 aa8.81□□□□□ -1
VPS53-207ENST00000570510 PIGCQ92535 297 aa8.81□□□□□ -1
VPS53-207ENST00000570510 MRPL48Q96GC5 212 aaKnown RBP8.81□□□□□ -1
VPS53-207ENST00000570510 Q96MT0 163 aa8.81□□□□□ -1
VPS53-207ENST00000570510 DUX3Q96PT4 197 aa8.81□□□□□ -1
VPS53-207ENST00000570510 IL4I1Q96RQ9 567 aa8.81□□□□□ -1
VPS53-207ENST00000570510 MINOS1-NBL1R4GNA1 71 aa8.81□□□□□ -1
VPS53-207ENST00000570510 CCDC182A6NF36 153 aa8.8□□□□□ -1
VPS53-207ENST00000570510 RFPL4AA6NLU0 287 aa8.8□□□□□ -1
VPS53-207ENST00000570510 ODF3BA8MYP8 253 aa8.8□□□□□ -1
VPS53-207ENST00000570510 SEC14L6B5MCN3 397 aa8.8□□□□□ -1
VPS53-207ENST00000570510 RFPL4AL1F8VTS6 287 aa8.8□□□□□ -1
VPS53-207ENST00000570510 CCL24O00175 119 aa8.8□□□□□ -1
VPS53-207ENST00000570510 MTRF1O75570 445 aaKnown RBP8.8□□□□□ -1
VPS53-207ENST00000570510 CD24P25063 80 aa8.8□□□□□ -1
VPS53-207ENST00000570510 RIDAP52758 137 aaKnown RBP8.8□□□□□ -1
VPS53-207ENST00000570510 SLC35B1P78383 322 aa8.8□□□□□ -1
VPS53-207ENST00000570510 PRDX4Q13162 271 aa8.8□□□□□ -1
VPS53-207ENST00000570510 TMEM236Q5W0B7 351 aa8.8□□□□□ -1
VPS53-207ENST00000570510 ZBTB49Q6ZSB9 765 aa8.8□□□□□ -1
VPS53-207ENST00000570510 Q6ZSR3 168 aa8.8□□□□□ -1
VPS53-207ENST00000570510 KRT77Q7Z794 578 aa8.8□□□□□ -1
VPS53-207ENST00000570510 ZNF695Q8IW36 515 aa8.8□□□□□ -1
VPS53-207ENST00000570510 ZNF561Q8N587 486 aa8.8□□□□□ -1
VPS53-207ENST00000570510 C11orf42Q8N5U0 333 aa8.8□□□□□ -1
VPS53-207ENST00000570510 THEM6Q8WUY1 208 aa8.8□□□□□ -1
VPS53-207ENST00000570510 SGK3Q96BR1 496 aa8.8□□□□□ -1
VPS53-207ENST00000570510 C10orf35Q96D05 121 aa8.8□□□□□ -1
VPS53-207ENST00000570510 SDSLQ96GA7 329 aa8.8□□□□□ -1
VPS53-207ENST00000570510 OR8B4Q96RC9 309 aa8.8□□□□□ -1
VPS53-207ENST00000570510 P2RX4Q99571 388 aa8.8□□□□□ -1
VPS53-207ENST00000570510 PPP1R3EQ9H7J1 279 aa8.8□□□□□ -1
VPS53-207ENST00000570510 MED20Q9H944 212 aa8.8□□□□□ -1
VPS53-207ENST00000570510 IMPAD1Q9NX62 359 aa8.8□□□□□ -1
VPS53-207ENST00000570510 DNAH1Q9P2D7 4330 aa8.79□□□□□ -1
VPS53-207ENST00000570510 DNAH7Q8WXX0 4024 aa8.79□□□□□ -1
VPS53-207ENST00000570510 hCG_38984A0A1B0GV85 526 aa8.79□□□□□ -1
VPS53-207ENST00000570510 SH2D7A6NKC9 451 aaPredicted RBP8.79□□□□□ -1
VPS53-207ENST00000570510 ZNF670-ZNF695F2Z2N8 137 aa8.79□□□□□ -1
VPS53-207ENST00000570510 M0QZK8 103 aa8.79□□□□□ -1
VPS53-207ENST00000570510 EI24O14681 340 aa8.79□□□□□ -1
VPS53-207ENST00000570510 SLC16A6O15403 523 aa8.79□□□□□ -1
VPS53-207ENST00000570510 SELENOFO60613 162 aa8.79□□□□□ -1
VPS53-207ENST00000570510 MITFO75030 526 aaPredicted RBP8.79□□□□□ -1
VPS53-207ENST00000570510 CST4P01036 141 aa8.79□□□□□ -1
VPS53-207ENST00000570510 ANOS1P23352 680 aa8.79□□□□□ -1
VPS53-207ENST00000570510 OR3A4PP47883 348 aa8.79□□□□□ -1
VPS53-207ENST00000570510 GPM6AP51674 278 aa8.79□□□□□ -1
VPS53-207ENST00000570510 ZNF121P58317 390 aaPredicted RBP8.79□□□□□ -1
VPS53-207ENST00000570510 ACTA2P62736 377 aa8.79□□□□□ -1
VPS53-207ENST00000570510 ACTG2P63267 376 aa8.79□□□□□ -1
VPS53-207ENST00000570510 ACTC1P68032 377 aa8.79□□□□□ -1
VPS53-207ENST00000570510 ACTA1P68133 377 aa8.79□□□□□ -1
VPS53-207ENST00000570510 MRPL28Q13084 256 aaKnown RBP8.79□□□□□ -1
VPS53-207ENST00000570510 ZNF273Q14593 569 aa8.79□□□□□ -1
VPS53-207ENST00000570510 SMIM21Q3B7S5 101 aa8.79□□□□□ -1
VPS53-207ENST00000570510 LYPD4Q6UWN0 246 aa8.79□□□□□ -1
VPS53-207ENST00000570510 C18orf65Q6ZTR6 163 aa8.79□□□□□ -1
VPS53-207ENST00000570510 FAM57BQ71RH2 274 aa8.79□□□□□ -1
VPS53-207ENST00000570510 OVCH2Q7RTZ1 564 aa8.79□□□□□ -1
VPS53-207ENST00000570510 ZDHHC23Q8IYP9 409 aa8.79□□□□□ -1
VPS53-207ENST00000570510 CBR4Q8N4T8 237 aa8.79□□□□□ -1
VPS53-207ENST00000570510 OR11H6Q8NGC7 330 aa8.79□□□□□ -1
VPS53-207ENST00000570510 CHPT1Q8WUD6 406 aa8.79□□□□□ -1
VPS53-207ENST00000570510 OR5P3Q8WZ94 311 aa8.79□□□□□ -1
VPS53-207ENST00000570510 EME1Q96AY2 570 aa8.79□□□□□ -1
VPS53-207ENST00000570510 ADGRL4Q9HBW9 690 aa8.79□□□□□ -1
VPS53-207ENST00000570510 BRD7Q9NPI1 651 aa8.79□□□□□ -1
VPS53-207ENST00000570510 RASL12Q9NYN1 266 aa8.79□□□□□ -1
VPS53-207ENST00000570510 NUFIP1Q9UHK0 495 aaKnown RBP8.79□□□□□ -1
VPS53-207ENST00000570510 TMEM269A0A1B0GVZ9 245 aa8.78□□□□□ -1
VPS53-207ENST00000570510 MEX3AA1L020 520 aaKnown RBP8.78□□□□□ -1
VPS53-207ENST00000570510 SAC3D1A6NKF1 404 aa8.78□□□□□ -1
VPS53-207ENST00000570510 C17orf98A8MV24 154 aa8.78□□□□□ -1
VPS53-207ENST00000570510 FAM90A22PA8MWA6 464 aa8.78□□□□□ -1
VPS53-207ENST00000570510 OR2F2O95006 317 aa8.78□□□□□ -1
VPS53-207ENST00000570510 IGLV3-1P01715 115 aa8.78□□□□□ -1
VPS53-207ENST00000570510 ZNF728P0DKX0 622 aa8.78□□□□□ -1
VPS53-207ENST00000570510 IGHV1-8P0DP01 117 aa8.78□□□□□ -1
VPS53-207ENST00000570510 PSKH1P11801 424 aa8.78□□□□□ -1
VPS53-207ENST00000570510 HTR1DP28221 377 aa8.78□□□□□ -1
VPS53-207ENST00000570510 EPHA2P29317 976 aa8.78□□□□□ -1
VPS53-207ENST00000570510 PRDX2P32119 198 aa8.78□□□□□ -1
VPS53-207ENST00000570510 MAP2K3P46734 347 aa8.78□□□□□ -1
VPS53-207ENST00000570510 EDDM3BP56851 147 aa8.78□□□□□ -1
VPS53-207ENST00000570510 ZNF260Q3ZCT1 412 aa8.78□□□□□ -1
VPS53-207ENST00000570510 FAM76BQ5HYJ3 339 aa8.78□□□□□ -1
VPS53-207ENST00000570510 FAM27D1Q5T7N8 215 aa8.78□□□□□ -1
VPS53-207ENST00000570510 LPCAT4Q643R3 524 aa8.78□□□□□ -1
VPS53-207ENST00000570510 ZNF322Q6U7Q0 402 aaPredicted RBP8.78□□□□□ -1
VPS53-207ENST00000570510 PLEKHG7Q6ZR37 379 aa8.78□□□□□ -1
VPS53-207ENST00000570510 SLC35F2Q8IXU6 374 aa8.78□□□□□ -1
VPS53-207ENST00000570510 ZNF676Q8N7Q3 588 aa8.78□□□□□ -1
VPS53-207ENST00000570510 BBS1Q8NFJ9 593 aa8.78□□□□□ -1
VPS53-207ENST00000570510 OR8U1Q8NH10 309 aa8.78□□□□□ -1
VPS53-207ENST00000570510 PGAM5Q96HS1 289 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms