RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 ZNF107Q9UII5 783 aaPredicted RBP9.28□□□□□ -0.92
PDXDC1-216ENST00000569715 NOP16Q9Y3C1 178 aaKnown RBP9.28□□□□□ -0.92
PDXDC1-216ENST00000569715 PYCARD-AS1I3L0S3 204 aa9.27□□□□□ -0.92
PDXDC1-216ENST00000569715 HSPB6O14558 160 aa9.27□□□□□ -0.92
PDXDC1-216ENST00000569715 UQCRFS1P47985 274 aa9.27□□□□□ -0.92
PDXDC1-216ENST00000569715 RNASE10Q5GAN6 216 aaKnown RBP9.27□□□□□ -0.92
PDXDC1-216ENST00000569715 C1orf174Q8IYL3 243 aa9.27□□□□□ -0.92
PDXDC1-216ENST00000569715 UFSP2Q9NUQ7 469 aa9.27□□□□□ -0.92
PDXDC1-216ENST00000569715 CACNA1DQ01668 2161 aa9.27□□□□□ -0.92
PDXDC1-216ENST00000569715 IGHV3-13P01766 116 aa9.27□□□□□ -0.93
PDXDC1-216ENST00000569715 NAT1P18440 290 aa9.27□□□□□ -0.93
PDXDC1-216ENST00000569715 ANXA7P20073 488 aaKnown RBP9.27□□□□□ -0.93
PDXDC1-216ENST00000569715 KLF3P57682 345 aaPredicted RBP9.27□□□□□ -0.93
PDXDC1-216ENST00000569715 SCGB2B2Q4G0G5 96 aa9.27□□□□□ -0.93
PDXDC1-216ENST00000569715 NHLRC3Q5JS37 347 aa9.27□□□□□ -0.93
PDXDC1-216ENST00000569715 FAM58AQ8N1B3 248 aa9.27□□□□□ -0.93
PDXDC1-216ENST00000569715 OR2Z1Q8NG97 314 aa9.27□□□□□ -0.93
PDXDC1-216ENST00000569715 OR4K15Q8NH41 348 aa9.27□□□□□ -0.93
PDXDC1-216ENST00000569715 MRGPRFQ96AM1 343 aa9.27□□□□□ -0.93
PDXDC1-216ENST00000569715 PKDREJQ9NTG1 2253 aa9.27□□□□□ -0.93
PDXDC1-216ENST00000569715 A0A1B0GWJ7 208 aa9.27□□□□□ -0.93
PDXDC1-216ENST00000569715 PTAFRP25105 342 aa9.27□□□□□ -0.93
PDXDC1-216ENST00000569715 IKZF1Q13422 519 aa9.27□□□□□ -0.93
PDXDC1-216ENST00000569715 RBMS2Q15434 407 aaKnown RBP9.27□□□□□ -0.93
PDXDC1-216ENST00000569715 ADAM5Q6NVV9 412 aa9.27□□□□□ -0.93
PDXDC1-216ENST00000569715 IDO2Q6ZQW0 420 aa9.27□□□□□ -0.93
PDXDC1-216ENST00000569715 AKAP14Q86UN6 197 aa9.27□□□□□ -0.93
PDXDC1-216ENST00000569715 HOGA1Q86XE5 327 aa9.27□□□□□ -0.93
PDXDC1-216ENST00000569715 ZBTB8BQ8NAP8 495 aaPredicted RBP9.27□□□□□ -0.93
PDXDC1-216ENST00000569715 OR13G1Q8NGZ3 307 aa9.27□□□□□ -0.93
PDXDC1-216ENST00000569715 CHAC2Q8WUX2 184 aa9.27□□□□□ -0.93
PDXDC1-216ENST00000569715 USB1Q9BQ65 265 aaKnown RBP9.27□□□□□ -0.93
PDXDC1-216ENST00000569715 CXXC4Q9H2H0 198 aa9.27□□□□□ -0.93
PDXDC1-216ENST00000569715 IGLV3-9A0A075B6K5 115 aa9.26□□□□□ -0.93
PDXDC1-216ENST00000569715 PEX14O75381 377 aa9.26□□□□□ -0.93
PDXDC1-216ENST00000569715 PGA5P0DJD9 388 aa9.26□□□□□ -0.93
PDXDC1-216ENST00000569715 AMY2BP19961 511 aa9.26□□□□□ -0.93
PDXDC1-216ENST00000569715 FUT3P21217 361 aa9.26□□□□□ -0.93
PDXDC1-216ENST00000569715 ERVK11-1P61568 191 aa9.26□□□□□ -0.93
PDXDC1-216ENST00000569715 SLC22A25Q6T423 547 aa9.26□□□□□ -0.93
PDXDC1-216ENST00000569715 OR13C8Q8NGS7 320 aa9.26□□□□□ -0.93
PDXDC1-216ENST00000569715 GHITMQ9H3K2 345 aa9.26□□□□□ -0.93
PDXDC1-216ENST00000569715 NPDC1Q9NQX5 325 aaPredicted RBP9.26□□□□□ -0.93
PDXDC1-216ENST00000569715 CA10Q9NS85 328 aa9.26□□□□□ -0.93
PDXDC1-216ENST00000569715 SPTBN1Q01082 2364 aaKnown RBP9.26□□□□□ -0.93
PDXDC1-216ENST00000569715 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.26□□□□□ -0.93
PDXDC1-216ENST00000569715 TMEM210A6NLX4 147 aa9.26□□□□□ -0.93
PDXDC1-216ENST00000569715 WNT9BO14905 357 aa9.26□□□□□ -0.93
PDXDC1-216ENST00000569715 C1QTNF12Q5T7M4 302 aa9.26□□□□□ -0.93
PDXDC1-216ENST00000569715 LINC01560Q8TB33 94 aa9.26□□□□□ -0.93
PDXDC1-216ENST00000569715 CMSS1Q9BQ75 279 aaKnown RBP9.26□□□□□ -0.93
PDXDC1-216ENST00000569715 NRIP2Q9BQI9 281 aa9.26□□□□□ -0.93
PDXDC1-216ENST00000569715 WDR13Q9H1Z4 485 aa9.26□□□□□ -0.93
PDXDC1-216ENST00000569715 ZNF442Q9H7R0 627 aa9.26□□□□□ -0.93
PDXDC1-216ENST00000569715 COQ3Q9NZJ6 369 aa9.26□□□□□ -0.93
PDXDC1-216ENST00000569715 C7orf66A4D0T2 115 aa9.26□□□□□ -0.93
PDXDC1-216ENST00000569715 A6NLC8 198 aa9.26□□□□□ -0.93
PDXDC1-216ENST00000569715 CA11O75493 328 aa9.26□□□□□ -0.93
PDXDC1-216ENST00000569715 DHFRP00374 187 aa9.26□□□□□ -0.93
PDXDC1-216ENST00000569715 HPXP02790 462 aa9.26□□□□□ -0.93
PDXDC1-216ENST00000569715 ARL6IP1Q15041 203 aa9.26□□□□□ -0.93
PDXDC1-216ENST00000569715 ST3GAL2Q16842 350 aa9.26□□□□□ -0.93
PDXDC1-216ENST00000569715 TAAR3PQ9P1P4 343 aa9.26□□□□□ -0.93
PDXDC1-216ENST00000569715 RCC2Q9P258 522 aaKnown RBP9.26□□□□□ -0.93
PDXDC1-216ENST00000569715 FCGR3AP08637 254 aa9.25□□□□□ -0.93
PDXDC1-216ENST00000569715 CBX5P45973 191 aa9.25□□□□□ -0.93
PDXDC1-216ENST00000569715 NUP37Q8NFH4 326 aa9.25□□□□□ -0.93
PDXDC1-216ENST00000569715 LILRB4Q8NHJ6 448 aa9.25□□□□□ -0.93
PDXDC1-216ENST00000569715 PRR7Q8TB68 274 aa9.25□□□□□ -0.93
PDXDC1-216ENST00000569715 SEC22CQ9BRL7 303 aa9.25□□□□□ -0.93
PDXDC1-216ENST00000569715 CHST6Q9GZX3 395 aa9.25□□□□□ -0.93
PDXDC1-216ENST00000569715 POLDIP2Q9Y2S7 368 aa9.25□□□□□ -0.93
PDXDC1-216ENST00000569715 FAM90A10PA6NDY2 464 aa9.25□□□□□ -0.93
PDXDC1-216ENST00000569715 FAM90A18PA6NE21 464 aa9.25□□□□□ -0.93
PDXDC1-216ENST00000569715 FAM90A16PA6NEW6 464 aa9.25□□□□□ -0.93
PDXDC1-216ENST00000569715 HMX3A6NHT5 357 aa9.25□□□□□ -0.93
PDXDC1-216ENST00000569715 FAM90A20PA6NIJ5 464 aa9.25□□□□□ -0.93
PDXDC1-216ENST00000569715 FAM90A8PA6NJQ4 464 aa9.25□□□□□ -0.93
PDXDC1-216ENST00000569715 FAM90A7PA6NKC0 464 aa9.25□□□□□ -0.93
PDXDC1-216ENST00000569715 OR2AT4A6NND4 320 aa9.25□□□□□ -0.93
PDXDC1-216ENST00000569715 FAM90A22PA8MWA6 464 aa9.25□□□□□ -0.93
PDXDC1-216ENST00000569715 FAM90A12PA8MX19 464 aa9.25□□□□□ -0.93
PDXDC1-216ENST00000569715 FAM90A5PA8MXJ8 464 aa9.25□□□□□ -0.93
PDXDC1-216ENST00000569715 FAM90A23PA8MXZ1 464 aa9.25□□□□□ -0.93
PDXDC1-216ENST00000569715 SDCBPO00560 298 aaPredicted RBP9.25□□□□□ -0.93
PDXDC1-216ENST00000569715 FAM90A15PP0C7V4 464 aa9.25□□□□□ -0.93
PDXDC1-216ENST00000569715 FAM90A13PP0C7W8 464 aa9.25□□□□□ -0.93
PDXDC1-216ENST00000569715 FAM90A14PP0C7W9 464 aa9.25□□□□□ -0.93
PDXDC1-216ENST00000569715 FAM90A24PP0C7X0 464 aa9.25□□□□□ -0.93
PDXDC1-216ENST00000569715 VSIG10L2P0DP72 767 aa9.25□□□□□ -0.93
PDXDC1-216ENST00000569715 RPS23P62266 143 aaKnown RBP9.25□□□□□ -0.93
PDXDC1-216ENST00000569715 MEF2DQ14814 521 aa9.25□□□□□ -0.93
PDXDC1-216ENST00000569715 FBXL19-AS1Q494R0 122 aa9.25□□□□□ -0.93
PDXDC1-216ENST00000569715 WDR82Q6UXN9 313 aa9.25□□□□□ -0.93
PDXDC1-216ENST00000569715 TLNRD1Q9H1K6 362 aa9.25□□□□□ -0.93
PDXDC1-216ENST00000569715 PLEKHA6Q9Y2H5 1048 aa9.25□□□□□ -0.93
PDXDC1-216ENST00000569715 TMA7Q9Y2S6 64 aaKnown RBP9.25□□□□□ -0.93
PDXDC1-216ENST00000569715 LRBAP50851 2863 aa9.25□□□□□ -0.93
PDXDC1-216ENST00000569715 TRAV24A0A0B4J272 114 aa9.25□□□□□ -0.93
PDXDC1-216ENST00000569715 HS3ST1O14792 307 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms