RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 FBLN5Q9UBX5 448 aa7.61□□□□□ -1.19
LINC00558-201ENST00000569422 AK3Q9UIJ7 227 aa7.61□□□□□ -1.19
LINC00558-201ENST00000569422 ZNF716A6NP11 495 aa7.61□□□□□ -1.19
LINC00558-201ENST00000569422 ZNF587BE7ETH6 402 aa7.61□□□□□ -1.19
LINC00558-201ENST00000569422 SYNGR3O43761 229 aa7.61□□□□□ -1.19
LINC00558-201ENST00000569422 DIRAS3O95661 229 aa7.61□□□□□ -1.19
LINC00558-201ENST00000569422 HLA-HP01893 362 aa7.61□□□□□ -1.19
LINC00558-201ENST00000569422 TDGF1P13385 188 aa7.61□□□□□ -1.19
LINC00558-201ENST00000569422 TBPP20226 339 aa7.61□□□□□ -1.19
LINC00558-201ENST00000569422 RBP2P50120 134 aa7.61□□□□□ -1.19
LINC00558-201ENST00000569422 ZNF239Q16600 458 aaKnown RBP7.61□□□□□ -1.19
LINC00558-201ENST00000569422 PNLIPRP3Q17RR3 467 aa7.61□□□□□ -1.19
LINC00558-201ENST00000569422 PHLDA2Q53GA4 152 aa7.61□□□□□ -1.19
LINC00558-201ENST00000569422 VAX1Q5SQQ9 334 aa7.61□□□□□ -1.19
LINC00558-201ENST00000569422 OR1S2Q8NGQ3 325 aa7.61□□□□□ -1.19
LINC00558-201ENST00000569422 RNF126Q9BV68 326 aa7.61□□□□□ -1.19
LINC00558-201ENST00000569422 TMEM231Q9H6L2 316 aa7.61□□□□□ -1.19
LINC00558-201ENST00000569422 UFSP2Q9NUQ7 469 aa7.61□□□□□ -1.19
LINC00558-201ENST00000569422 RASL12Q9NYN1 266 aa7.61□□□□□ -1.19
LINC00558-201ENST00000569422 ZNF629Q9UEG4 869 aaPredicted RBP7.61□□□□□ -1.19
LINC00558-201ENST00000569422 LSM5Q9Y4Y9 91 aaKnown RBP7.61□□□□□ -1.19
LINC00558-201ENST00000569422 TUBAL3A6NHL2 446 aa7.6□□□□□ -1.19
LINC00558-201ENST00000569422 MRPL33O75394 65 aaKnown RBP7.6□□□□□ -1.19
LINC00558-201ENST00000569422 OR7C1O76099 320 aaPredicted RBP7.6□□□□□ -1.19
LINC00558-201ENST00000569422 MBP02144 154 aa7.6□□□□□ -1.19
LINC00558-201ENST00000569422 SLC25A4P12235 298 aa7.6□□□□□ -1.19
LINC00558-201ENST00000569422 FPR2P25090 351 aa7.6□□□□□ -1.19
LINC00558-201ENST00000569422 RBMXP38159 391 aaKnown RBP7.6□□□□□ -1.19
LINC00558-201ENST00000569422 MPLP40238 635 aa7.6□□□□□ -1.19
LINC00558-201ENST00000569422 TAS2R46P59540 309 aa7.6□□□□□ -1.19
LINC00558-201ENST00000569422 AIMP2Q13155 320 aaKnown RBP7.6□□□□□ -1.19
LINC00558-201ENST00000569422 IKZF1Q13422 519 aa7.6□□□□□ -1.19
LINC00558-201ENST00000569422 RAB35Q15286 201 aa7.6□□□□□ -1.19
LINC00558-201ENST00000569422 PABPC1L2AQ5JQF8 200 aa7.6□□□□□ -1.19
LINC00558-201ENST00000569422 OR5T2Q8NGG2 359 aa7.6□□□□□ -1.19
LINC00558-201ENST00000569422 SSC4DQ8WTU2 575 aa7.6□□□□□ -1.19
LINC00558-201ENST00000569422 DOCK7Q96N67 2140 aa7.6□□□□□ -1.19
LINC00558-201ENST00000569422 SULT4A1Q9BR01 284 aa7.6□□□□□ -1.19
LINC00558-201ENST00000569422 PARP12Q9H0J9 701 aaKnown RBP7.6□□□□□ -1.19
LINC00558-201ENST00000569422 ST3GAL6Q9Y274 331 aa7.6□□□□□ -1.19
LINC00558-201ENST00000569422 EP300Q09472 2414 aaPredicted RBP7.6□□□□□ -1.19
LINC00558-201ENST00000569422 SNAPC5O75971 98 aa7.6□□□□□ -1.19
LINC00558-201ENST00000569422 HOXD4P09016 255 aaPredicted RBP7.6□□□□□ -1.19
LINC00558-201ENST00000569422 OR5H8P0DN80 308 aa7.6□□□□□ -1.19
LINC00558-201ENST00000569422 CD79AP11912 226 aa7.6□□□□□ -1.19
LINC00558-201ENST00000569422 CTSSP25774 331 aa7.6□□□□□ -1.19
LINC00558-201ENST00000569422 DUSP1P28562 367 aa7.6□□□□□ -1.19
LINC00558-201ENST00000569422 PTGER4P35408 488 aa7.6□□□□□ -1.19
LINC00558-201ENST00000569422 OVCH2Q7RTZ1 564 aa7.6□□□□□ -1.19
LINC00558-201ENST00000569422 TUSC5Q8IXB3 177 aa7.6□□□□□ -1.19
LINC00558-201ENST00000569422 FAM89BQ8N5H3 189 aa7.6□□□□□ -1.19
LINC00558-201ENST00000569422 MRPS24Q96EL2 167 aaKnown RBP7.6□□□□□ -1.19
LINC00558-201ENST00000569422 EAF1Q96JC9 268 aaPredicted RBP7.6□□□□□ -1.19
LINC00558-201ENST00000569422 ZNF442Q9H7R0 627 aa7.6□□□□□ -1.19
LINC00558-201ENST00000569422 TIMM10BQ9Y5J6 103 aa7.6□□□□□ -1.19
LINC00558-201ENST00000569422 TECTAO75443 2155 aa7.59□□□□□ -1.19
LINC00558-201ENST00000569422 ZNF407Q9C0G0 2248 aa7.59□□□□□ -1.19
LINC00558-201ENST00000569422 IGKV1-12A0A0C4DH73 117 aa7.59□□□□□ -1.19
LINC00558-201ENST00000569422 SERPINE3A8MV23 424 aa7.59□□□□□ -1.19
LINC00558-201ENST00000569422 AGPAT2O15120 278 aa7.59□□□□□ -1.19
LINC00558-201ENST00000569422 IGKV1D-12P01611 117 aa7.59□□□□□ -1.19
LINC00558-201ENST00000569422 FGF2P09038 288 aa7.59□□□□□ -1.19
LINC00558-201ENST00000569422 CNR1P21554 472 aa7.59□□□□□ -1.19
LINC00558-201ENST00000569422 CRYGSP22914 178 aa7.59□□□□□ -1.19
LINC00558-201ENST00000569422 TNFSF4P23510 183 aa7.59□□□□□ -1.19
LINC00558-201ENST00000569422 OTX1P32242 354 aaPredicted RBP7.59□□□□□ -1.19
LINC00558-201ENST00000569422 MAGEA5P43359 124 aa7.59□□□□□ -1.19
LINC00558-201ENST00000569422 NOVA1P51513 510 aaKnown RBP7.59□□□□□ -1.19
LINC00558-201ENST00000569422 PLGLB1Q02325 96 aa7.59□□□□□ -1.19
LINC00558-201ENST00000569422 FAM189A2Q15884 450 aa7.59□□□□□ -1.19
LINC00558-201ENST00000569422 IAH1Q2TAA2 248 aaPredicted RBP7.59□□□□□ -1.19
LINC00558-201ENST00000569422 ACTBL2Q562R1 376 aa7.59□□□□□ -1.19
LINC00558-201ENST00000569422 PAN3Q58A45 887 aaKnown RBP7.59□□□□□ -1.19
LINC00558-201ENST00000569422 ABHD17BQ5VST6 288 aa7.59□□□□□ -1.19
LINC00558-201ENST00000569422 FAHD2BQ6P2I3 314 aaPredicted RBP7.59□□□□□ -1.19
LINC00558-201ENST00000569422 PEG10Q86TG7 708 aaKnown RBP7.59□□□□□ -1.19
LINC00558-201ENST00000569422 CPEB3Q8NE35 698 aaKnown RBP7.59□□□□□ -1.19
LINC00558-201ENST00000569422 BPIFCQ8NFQ6 507 aa7.59□□□□□ -1.19
LINC00558-201ENST00000569422 FNDC9Q8TBE3 224 aa7.59□□□□□ -1.19
LINC00558-201ENST00000569422 EMG1Q92979 244 aaKnown RBP7.59□□□□□ -1.19
LINC00558-201ENST00000569422 FAHD2AQ96GK7 314 aa7.59□□□□□ -1.19
LINC00558-201ENST00000569422 OR2H1Q9GZK4 316 aa7.59□□□□□ -1.19
LINC00558-201ENST00000569422 SLC25A32Q9H2D1 315 aa7.59□□□□□ -1.19
LINC00558-201ENST00000569422 GPR35Q9HC97 309 aa7.59□□□□□ -1.19
LINC00558-201ENST00000569422 SLC7A10Q9NS82 523 aa7.59□□□□□ -1.19
LINC00558-201ENST00000569422 OSGIN2Q9Y236 505 aa7.59□□□□□ -1.19
LINC00558-201ENST00000569422 ATP23Q9Y6H3 246 aa7.59□□□□□ -1.19
LINC00558-201ENST00000569422 BDP1A6H8Y1 2624 aa7.59□□□□□ -1.19
LINC00558-201ENST00000569422 DNAJC13O75165 2243 aa7.59□□□□□ -1.19
LINC00558-201ENST00000569422 ZFHX4Q86UP3 3567 aa7.59□□□□□ -1.19
LINC00558-201ENST00000569422 IGHV3-64DA0A0J9YX35 117 aa7.59□□□□□ -1.19
LINC00558-201ENST00000569422 LNP1A1A4G5 178 aa7.59□□□□□ -1.19
LINC00558-201ENST00000569422 A8MXK9 166 aa7.59□□□□□ -1.19
LINC00558-201ENST00000569422 KRBOX1C9JBD0 128 aa7.59□□□□□ -1.19
LINC00558-201ENST00000569422 FBXO24O75426 580 aa7.59□□□□□ -1.19
LINC00558-201ENST00000569422 IGLV3-1P01715 115 aa7.59□□□□□ -1.19
LINC00558-201ENST00000569422 NPBWR2P48146 333 aa7.59□□□□□ -1.19
LINC00558-201ENST00000569422 PPIAP62937 165 aaKnown RBP7.59□□□□□ -1.19
LINC00558-201ENST00000569422 IGFBP7Q16270 282 aa7.59□□□□□ -1.19
LINC00558-201ENST00000569422 SLC25A26Q70HW3 274 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms