RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 GLDNQ6ZMI3 551 aaPredicted RBP12.49□□□□□ -0.41
COMMD4-221ENST00000567935 SLC25A26Q70HW3 274 aa12.49□□□□□ -0.41
COMMD4-221ENST00000567935 DOLPP1Q86YN1 238 aa12.49□□□□□ -0.41
COMMD4-221ENST00000567935 ZDHHC22Q8N966 263 aa12.49□□□□□ -0.41
COMMD4-221ENST00000567935 OR1J1Q8NGS3 322 aa12.49□□□□□ -0.41
COMMD4-221ENST00000567935 MUCL1Q96DR8 90 aa12.49□□□□□ -0.41
COMMD4-221ENST00000567935 ELOVL5Q9NYP7 299 aa12.49□□□□□ -0.41
COMMD4-221ENST00000567935 ELF5Q9UKW6 265 aaPredicted RBP12.49□□□□□ -0.41
COMMD4-221ENST00000567935 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.48□□□□□ -0.41
COMMD4-221ENST00000567935 A0A1W2PR80 420 aa12.48□□□□□ -0.41
COMMD4-221ENST00000567935 UBE2QL1A1L167 161 aa12.48□□□□□ -0.41
COMMD4-221ENST00000567935 FAM221AA4D161 298 aa12.48□□□□□ -0.41
COMMD4-221ENST00000567935 TMEM210A6NLX4 147 aa12.48□□□□□ -0.41
COMMD4-221ENST00000567935 A8MXE2 369 aa12.48□□□□□ -0.41
COMMD4-221ENST00000567935 TRAPPC2LH3BP13 241 aa12.48□□□□□ -0.41
COMMD4-221ENST00000567935 J3QT63 122 aa12.48□□□□□ -0.41
COMMD4-221ENST00000567935 CREBL2O60519 120 aaPredicted RBP12.48□□□□□ -0.41
COMMD4-221ENST00000567935 PDCD6O75340 191 aa12.48□□□□□ -0.41
COMMD4-221ENST00000567935 PLATP00750 562 aa12.48□□□□□ -0.41
COMMD4-221ENST00000567935 GABRR1P24046 479 aa12.48□□□□□ -0.41
COMMD4-221ENST00000567935 CHATP28329 748 aa12.48□□□□□ -0.41
COMMD4-221ENST00000567935 HAAOP46952 286 aa12.48□□□□□ -0.41
COMMD4-221ENST00000567935 GPM6AP51674 278 aa12.48□□□□□ -0.41
COMMD4-221ENST00000567935 CD300CQ08708 224 aa12.48□□□□□ -0.41
COMMD4-221ENST00000567935 TSC22D1Q15714 1073 aa12.48□□□□□ -0.41
COMMD4-221ENST00000567935 ZNF718Q3SXZ3 478 aa12.48□□□□□ -0.41
COMMD4-221ENST00000567935 ZFP69Q49AA0 526 aa12.48□□□□□ -0.41
COMMD4-221ENST00000567935 TMEM211Q6ICI0 200 aa12.48□□□□□ -0.41
COMMD4-221ENST00000567935 OR2T2Q6IF00 324 aa12.48□□□□□ -0.41
COMMD4-221ENST00000567935 ZNF474Q6S9Z5 364 aaPredicted RBP12.48□□□□□ -0.41
COMMD4-221ENST00000567935 IDO2Q6ZQW0 420 aa12.48□□□□□ -0.41
COMMD4-221ENST00000567935 MYPOPQ86VE0 399 aaPredicted RBP12.48□□□□□ -0.41
COMMD4-221ENST00000567935 TMEM17Q86X19 198 aa12.48□□□□□ -0.41
COMMD4-221ENST00000567935 CALHM1Q8IU99 346 aa12.48□□□□□ -0.41
COMMD4-221ENST00000567935 TGIF2LYQ8IUE0 185 aa12.48□□□□□ -0.41
COMMD4-221ENST00000567935 Q8IYB0 196 aa12.48□□□□□ -0.41
COMMD4-221ENST00000567935 FBXL14Q8N1E6 418 aa12.48□□□□□ -0.41
COMMD4-221ENST00000567935 SPERTQ8NA61 448 aa12.48□□□□□ -0.41
COMMD4-221ENST00000567935 OR4D10Q8NGI6 311 aa12.48□□□□□ -0.41
COMMD4-221ENST00000567935 OR4K15Q8NH41 348 aa12.48□□□□□ -0.41
COMMD4-221ENST00000567935 SLC25A40Q8TBP6 338 aa12.48□□□□□ -0.41
COMMD4-221ENST00000567935 EMG1Q92979 244 aaKnown RBP12.48□□□□□ -0.41
COMMD4-221ENST00000567935 DVL3Q92997 716 aaPredicted RBP12.48□□□□□ -0.41
COMMD4-221ENST00000567935 DACT3Q96B18 629 aaPredicted RBP12.48□□□□□ -0.41
COMMD4-221ENST00000567935 SCGB3A2Q96PL1 93 aa12.48□□□□□ -0.41
COMMD4-221ENST00000567935 OR2J1Q9GZK6 312 aa12.48□□□□□ -0.41
COMMD4-221ENST00000567935 TINAGL1Q9GZM7 467 aaPredicted RBP12.48□□□□□ -0.41
COMMD4-221ENST00000567935 SPACA1Q9HBV2 294 aa12.48□□□□□ -0.41
COMMD4-221ENST00000567935 ST3GAL6Q9Y274 331 aa12.48□□□□□ -0.41
COMMD4-221ENST00000567935 SPEF1Q9Y4P9 236 aa12.48□□□□□ -0.41
COMMD4-221ENST00000567935 IGHV1-18A0A0C4DH31 117 aa12.47□□□□□ -0.41
COMMD4-221ENST00000567935 LRP5LA4QPB2 252 aa12.47□□□□□ -0.41
COMMD4-221ENST00000567935 M0QYG6 137 aa12.47□□□□□ -0.41
COMMD4-221ENST00000567935 GLAP06280 429 aa12.47□□□□□ -0.41
COMMD4-221ENST00000567935 AMY2BP19961 511 aa12.47□□□□□ -0.41
COMMD4-221ENST00000567935 FUT3P21217 361 aa12.47□□□□□ -0.41
COMMD4-221ENST00000567935 KITLGP21583 273 aa12.47□□□□□ -0.41
COMMD4-221ENST00000567935 MZT1Q08AG7 82 aa12.47□□□□□ -0.41
COMMD4-221ENST00000567935 CBX3Q13185 183 aa12.47□□□□□ -0.41
COMMD4-221ENST00000567935 IL13RA2Q14627 380 aa12.47□□□□□ -0.41
COMMD4-221ENST00000567935 CDK10Q15131 360 aa12.47□□□□□ -0.41
COMMD4-221ENST00000567935 TAF9Q16594 264 aa12.47□□□□□ -0.41
COMMD4-221ENST00000567935 MBNL2Q5VZF2 373 aaKnown RBP12.47□□□□□ -0.41
COMMD4-221ENST00000567935 ZNF626Q68DY1 528 aa12.47□□□□□ -0.41
COMMD4-221ENST00000567935 OR5H2Q8NGV7 314 aa12.47□□□□□ -0.41
COMMD4-221ENST00000567935 FBXW5Q969U6 566 aa12.47□□□□□ -0.41
COMMD4-221ENST00000567935 MARS2Q96GW9 593 aaKnown RBP12.47□□□□□ -0.41
COMMD4-221ENST00000567935 POLDIP2Q9Y2S7 368 aa12.47□□□□□ -0.41
COMMD4-221ENST00000567935 PRRC2AP48634 2157 aaKnown RBP12.47□□□□□ -0.41
COMMD4-221ENST00000567935 IGHV2OR16-5A0A0B4J2B6 119 aa12.46□□□□□ -0.41
COMMD4-221ENST00000567935 TMEM82A0PJX8 343 aa12.46□□□□□ -0.41
COMMD4-221ENST00000567935 KIAA1324LA8MWY0 1029 aaPredicted RBP12.46□□□□□ -0.41
COMMD4-221ENST00000567935 SSNA1O43805 119 aa12.46□□□□□ -0.41
COMMD4-221ENST00000567935 RLN1P04808 185 aa12.46□□□□□ -0.41
COMMD4-221ENST00000567935 FCER2P06734 321 aa12.46□□□□□ -0.41
COMMD4-221ENST00000567935 SFTPBP07988 381 aa12.46□□□□□ -0.41
COMMD4-221ENST00000567935 ACAA1P09110 424 aaPredicted RBP12.46□□□□□ -0.41
COMMD4-221ENST00000567935 SULT1A3P0DMM9 295 aa12.46□□□□□ -0.41
COMMD4-221ENST00000567935 SULT1A4P0DMN0 295 aa12.46□□□□□ -0.41
COMMD4-221ENST00000567935 ANXA3P12429 323 aa12.46□□□□□ -0.41
COMMD4-221ENST00000567935 GCH1P30793 250 aa12.46□□□□□ -0.41
COMMD4-221ENST00000567935 HRH1P35367 487 aa12.46□□□□□ -0.41
COMMD4-221ENST00000567935 ECI1P42126 302 aa12.46□□□□□ -0.41
COMMD4-221ENST00000567935 OR3A3P47888 321 aa12.46□□□□□ -0.41
COMMD4-221ENST00000567935 CASP6P55212 293 aa12.46□□□□□ -0.41
COMMD4-221ENST00000567935 CDSNQ15517 529 aa12.46□□□□□ -0.41
COMMD4-221ENST00000567935 FAM76BQ5HYJ3 339 aa12.46□□□□□ -0.41
COMMD4-221ENST00000567935 NKAPLQ5M9Q1 402 aa12.46□□□□□ -0.41
COMMD4-221ENST00000567935 SIGIRRQ6IA17 410 aa12.46□□□□□ -0.41
COMMD4-221ENST00000567935 FAHD2BQ6P2I3 314 aaPredicted RBP12.46□□□□□ -0.41
COMMD4-221ENST00000567935 C3P1Q6ZMU1 363 aa12.46□□□□□ -0.41
COMMD4-221ENST00000567935 SLC36A1Q7Z2H8 476 aa12.46□□□□□ -0.41
COMMD4-221ENST00000567935 LIX1LQ8IVB5 337 aa12.46□□□□□ -0.41
COMMD4-221ENST00000567935 RPRMLQ8N4K4 120 aa12.46□□□□□ -0.41
COMMD4-221ENST00000567935 GVQW1Q8N7I0 195 aa12.46□□□□□ -0.41
COMMD4-221ENST00000567935 BHLHE23Q8NDY6 225 aa12.46□□□□□ -0.41
COMMD4-221ENST00000567935 BEST4Q8NFU0 473 aa12.46□□□□□ -0.41
COMMD4-221ENST00000567935 OR4S1Q8NGB4 309 aa12.46□□□□□ -0.41
COMMD4-221ENST00000567935 KLF14Q8TD94 323 aaPredicted RBP12.46□□□□□ -0.41
COMMD4-221ENST00000567935 SNAPC3Q92966 411 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms